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The map label for this gene is yrhO [H]

Identifier: 78357707

GI number: 78357707

Start: 2678036

End: 2678779

Strand: Reverse

Name: yrhO [H]

Synonym: Dde_2665

Alternate gene names: 78357707

Gene position: 2678779-2678036 (Counterclockwise)

Preceding gene: 78357711

Following gene: 78357706

Centisome position: 71.81

GC content: 57.12

Gene sequence:

>744_bases
ATGGATAGCGAAATCATAAAGGCTCTTAAGCGGTTCGGGTTTACCCAGCAGGAATCCATCATGTACGTGACGCTGTGCAG
GCACGGTGCGCTTACAGGATATGAGGCGGCAAAGCTGGCGGGCATATCGCGTTCCAACGCATATGCGGCGTTATCCAGTC
TGGTGGAAAAGGGCGGGGCCGTGGTGGCCAGCGACGACACCAGCAAGTATGTGCCCACACCCCGCAAGGAGCTGCTGGTC
ACCATACGCAGGCACTGTGACGAGACTCTGGAGTTTCTCGAACAGCATCTGCCCGAAGAGCAGCCGGTGGAAATGCCCTA
CCTGACGGTGACGGGGTATCAGAACACCATGGATAAAGTGCGCAACATGCTGCGTCTGGCGCAGTTGCGCGTGTATATTT
CGATGCATTCGGGCAATGCCGCGCAGCTGAAGGAAGACATGGCCGCCTGTGCCGCCCGCGGACTCAAGGTGGTTATTCTG
TCGGATGCCGACCCGCAGATTTCCGGAGCCATTTTTATGCATAATGCCGCGGGTACGGGGCATATCAAGCTTATTGCCGA
CACGCGCGAAGTGATTACCGGCGTGGTGGATCAGGCCGCCAGAACAGGGCAGTGTCTGTACTCCGCCAACGAGCATCTGG
TGTATCTGATGCGCGAGGCGCTGCTGAATGAAATTGAACTTATCAAGATCCGGTCCGGCATGAGCGGTGCAGAACCGGAG
GAGAGTCCCACAAGGGGGAAATAA

Upstream 100 bases:

>100_bases
CCGGCCGCAGGGTGTTTTTTTGCAGACCGGATATTGACAACCGGGTTCAGGGTAATTAGTAGTACTAAATAGTACCACGG
TAGACGTGGCAGGAAATTGC

Downstream 100 bases:

>100_bases
TGTCGAACGTTCGTTCCGCCGTGACAGATGAACTGGATTTTTACGGGCTTTCCACACCCATGGAGCTGGTGGAAACCTAT
GGCAGCCCGCTGTACGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDSEIIKALKRFGFTQQESIMYVTLCRHGALTGYEAAKLAGISRSNAYAALSSLVEKGGAVVASDDTSKYVPTPRKELLV
TIRRHCDETLEFLEQHLPEEQPVEMPYLTVTGYQNTMDKVRNMLRLAQLRVYISMHSGNAAQLKEDMAACAARGLKVVIL
SDADPQISGAIFMHNAAGTGHIKLIADTREVITGVVDQAARTGQCLYSANEHLVYLMREALLNEIELIKIRSGMSGAEPE
ESPTRGK

Sequences:

>Translated_247_residues
MDSEIIKALKRFGFTQQESIMYVTLCRHGALTGYEAAKLAGISRSNAYAALSSLVEKGGAVVASDDTSKYVPTPRKELLV
TIRRHCDETLEFLEQHLPEEQPVEMPYLTVTGYQNTMDKVRNMLRLAQLRVYISMHSGNAAQLKEDMAACAARGLKVVIL
SDADPQISGAIFMHNAAGTGHIKLIADTREVITGVVDQAARTGQCLYSANEHLVYLMREALLNEIELIKIRSGMSGAEPE
ESPTRGK
>Mature_247_residues
MDSEIIKALKRFGFTQQESIMYVTLCRHGALTGYEAAKLAGISRSNAYAALSSLVEKGGAVVASDDTSKYVPTPRKELLV
TIRRHCDETLEFLEQHLPEEQPVEMPYLTVTGYQNTMDKVRNMLRLAQLRVYISMHSGNAAQLKEDMAACAARGLKVVIL
SDADPQISGAIFMHNAAGTGHIKLIADTREVITGVVDQAARTGQCLYSANEHLVYLMREALLNEIELIKIRSGMSGAEPE
ESPTRGK

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 27143; Mature: 27143

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSEIIKALKRFGFTQQESIMYVTLCRHGALTGYEAAKLAGISRSNAYAALSSLVEKGGA
CCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCE
VVASDDTSKYVPTPRKELLVTIRRHCDETLEFLEQHLPEEQPVEMPYLTVTGYQNTMDKV
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHH
RNMLRLAQLRVYISMHSGNAAQLKEDMAACAARGLKVVILSDADPQISGAIFMHNAAGTG
HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCC
HIKLIADTREVITGVVDQAARTGQCLYSANEHLVYLMREALLNEIELIKIRSGMSGAEPE
EEEEEECHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCC
ESPTRGK
CCCCCCC
>Mature Secondary Structure
MDSEIIKALKRFGFTQQESIMYVTLCRHGALTGYEAAKLAGISRSNAYAALSSLVEKGGA
CCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCE
VVASDDTSKYVPTPRKELLVTIRRHCDETLEFLEQHLPEEQPVEMPYLTVTGYQNTMDKV
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHH
RNMLRLAQLRVYISMHSGNAAQLKEDMAACAARGLKVVILSDADPQISGAIFMHNAAGTG
HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCC
HIKLIADTREVITGVVDQAARTGQCLYSANEHLVYLMREALLNEIELIKIRSGMSGAEPE
EEEEEECHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCC
ESPTRGK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]