| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is feoB1 [H]
Identifier: 78357711
GI number: 78357711
Start: 2680950
End: 2683127
Strand: Reverse
Name: feoB1 [H]
Synonym: Dde_2669
Alternate gene names: 78357711
Gene position: 2683127-2680950 (Counterclockwise)
Preceding gene: 78357712
Following gene: 78357707
Centisome position: 71.93
GC content: 57.94
Gene sequence:
>2178_bases ATGAAAATTACTACCATTGCACTTGCCGGTAACCCTAACTCCGGCAAAACCACGGCTTTTAACGCACTGACAGGCGCCCG CCAGCATGTGGGCAACTATCCGGGCATCACCGTGGATAAAAAAGAGGGCAGAGTGCGCCTTGATGGACGGGAAGTGCACA TCATCGACCTTCCGGGCACGTACTCTCTTACCGCCTATACGCAGGAAGAACTGGTTGCCCGCAGCTATGTGGTGGACGAA CGCCCCGATGTGGTGGTGGACGTGCTCAACTCGGCTGCGCTTGAGCGTAACCTGTATCTTGCCGTGCAGTTTCTTGAAAT GGGCGTACCCGTGGCGCTCGGGCTGAACATGATGGACGAAGCCCGCAAGCAGGGTATCGAGATTGACGTGGCCCGTCTTT CCAGAACTCTGGGTGTGCCCGTGCGCGAAACCGTTGCCCGTAGCGGCGAGGGCGTGAAAGAACTGCTTCAGGATGCCGTG GAATTCGGTGATTCCCGCAGCAAGCAGCCATGGACTCCGCTGGAGATTTCTTACGGGGCAGACATCGACCCTGTGCTGCG CGCCATGACTGCGCGTATCGAGTCGGAAAAATTTCTTGATAAATACCCCGCACGCTGGGTGGCCATCAAATATATCGAAG GCGACGAGGAAATGATGCGTCTCGGCCGTGATGCCGGTCCGCTGGCGCTGGAGCTGGAAGCGCAGGTCAAGGAAGTGGCC GACCACCTGCAGAGCACGCTCAATACATACCCCGAAGCTGTCATAGCCGACTACCGCTACGGGTTCATTGCTTCCGTGCT GCGTGACGGCGTGGTGAAGCGCCGCGACGAGATGACGGACCGTATTCAGTTTTCCGACCGTCTTGACAAAGTGCTTACCC ATCAGCTGTTCGGCCCGCTGATCATGCTGGGGCTGCTGTATCTTATTTATGAAATTACCTTCGCCATCGGTGAAATTCCC ATGGGCTGGGTGGAAGAAATGTTCGGCTGGCTTAACGAGACCGCCTCTGCCGCACTGCCCGACGGCCTGCTGAAATCGCT TATCGTGTCCGGCATCATAGACGGCGTGGGCGGTGTCATGGGGTTTGTGCCGCTTATTCTGTTCATGTTCCTGCAGATCG CGTTTCTGGAAGACTCCGGCTACATGGCGCGTATCGCCTATATGCTGGACAGGGTGTTTCGCATGTTCGGCCTGCACGGC TGCTCGGTAATGCCCTTCATCGTTTCCGGCGGTATTGCCGGCGGTTGTGCCGTGCCCGGCGTTATGGCCACGCGCACCCT GCGCAGCCGCAAGGAAAAACTGGCCACGCTCATCACGGCGCCTTTCATGGCCTGCGGTGCAAAAGTGCCTGTATTCATTC TTTTTGTGGGTATTTTCTTTGCCGATAATGAAGCTGCTGTCATGTTCTCGCTGACACTGGGCGGCTGGGTGGCGGCGCTG CTTGTGGCACGCCTGCTGCGCTCCACGCTCATCAAAGGCGAATCCACTCCCTTTGTCATGGAACTGCCTCCCTACCGTAT TCCCACGCTGCGCGGACTGCTCATTCACACATGGGAGCGTACGTGGCAGTACATTAAAAAAGCGGGTACCGTTATTCTGG CCATTTCCATTCTGCTCTGGGTTGCCATGACCTTTCCGGAGCTGCCTGATACTCAGGTGGCGCAGTTTGAAAGCCAGCGG CAGCTTATAACCGGTCAGATGGAAGCAGCCGAGGCCGAAGGCCATGATGTGGCCCCCATGGAAGAAGCCCTTGCCGCAGT GGATGCGGAAGAAGCCATGGCCGGACTGCGGTACTCCGCAGCGGGACGTGTGGGCACTGCCATTGAATCCGTAACCTCTG TGGCCGGCTTTGACTGGCGTACCAACATTGCTCTGGTGGGCGGCATCGCGGCCAAGGAAGTTATCGTATCCACACTGGGT ACCGCGTATTCACTGGGCGAGGTTGACCCCGAAGAAAGCGGCAGTCTGGCAGAACGCATAGCCAACGACCCGTCGTGGAA TCCCGCCCGTGCGCTGGCGCTCATGCTCTTTGTGCTGCTGTACGCTCCGTGCTTTGTGGCTGTGGTAGCCATCAAGCAGG AGGCCGGTTCGTGGGGCTGGGCAGGGTTCAGCGTTGTCTTCAACACCATTCTGGCTTTTGCGGTGGCCACGGTGGTGTAC CAGATAGGGTCGCTATAA
Upstream 100 bases:
>100_bases GCGACACGGCAGCCTGCCGGAACAGGGGATGTTTCCGGCAGTTGCGGGGGCCGGAAGCTTCCGCGGTCCGGCTCAACAGT ATGGGGAACAGGAATCAGGA
Downstream 100 bases:
>100_bases CTGCATCCCCCGCCGCATCATCATACCGGTAACCGGCCGGAGAGGTTCGCCTCTCCGGCCTTTTTTCCGTGCTGCAAAAA AAAAGGGCGCCGCGGTATAC
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MKITTIALAGNPNSGKTTAFNALTGARQHVGNYPGITVDKKEGRVRLDGREVHIIDLPGTYSLTAYTQEELVARSYVVDE RPDVVVDVLNSAALERNLYLAVQFLEMGVPVALGLNMMDEARKQGIEIDVARLSRTLGVPVRETVARSGEGVKELLQDAV EFGDSRSKQPWTPLEISYGADIDPVLRAMTARIESEKFLDKYPARWVAIKYIEGDEEMMRLGRDAGPLALELEAQVKEVA DHLQSTLNTYPEAVIADYRYGFIASVLRDGVVKRRDEMTDRIQFSDRLDKVLTHQLFGPLIMLGLLYLIYEITFAIGEIP MGWVEEMFGWLNETASAALPDGLLKSLIVSGIIDGVGGVMGFVPLILFMFLQIAFLEDSGYMARIAYMLDRVFRMFGLHG CSVMPFIVSGGIAGGCAVPGVMATRTLRSRKEKLATLITAPFMACGAKVPVFILFVGIFFADNEAAVMFSLTLGGWVAAL LVARLLRSTLIKGESTPFVMELPPYRIPTLRGLLIHTWERTWQYIKKAGTVILAISILLWVAMTFPELPDTQVAQFESQR QLITGQMEAAEAEGHDVAPMEEALAAVDAEEAMAGLRYSAAGRVGTAIESVTSVAGFDWRTNIALVGGIAAKEVIVSTLG TAYSLGEVDPEESGSLAERIANDPSWNPARALALMLFVLLYAPCFVAVVAIKQEAGSWGWAGFSVVFNTILAFAVATVVY QIGSL
Sequences:
>Translated_725_residues MKITTIALAGNPNSGKTTAFNALTGARQHVGNYPGITVDKKEGRVRLDGREVHIIDLPGTYSLTAYTQEELVARSYVVDE RPDVVVDVLNSAALERNLYLAVQFLEMGVPVALGLNMMDEARKQGIEIDVARLSRTLGVPVRETVARSGEGVKELLQDAV EFGDSRSKQPWTPLEISYGADIDPVLRAMTARIESEKFLDKYPARWVAIKYIEGDEEMMRLGRDAGPLALELEAQVKEVA DHLQSTLNTYPEAVIADYRYGFIASVLRDGVVKRRDEMTDRIQFSDRLDKVLTHQLFGPLIMLGLLYLIYEITFAIGEIP MGWVEEMFGWLNETASAALPDGLLKSLIVSGIIDGVGGVMGFVPLILFMFLQIAFLEDSGYMARIAYMLDRVFRMFGLHG CSVMPFIVSGGIAGGCAVPGVMATRTLRSRKEKLATLITAPFMACGAKVPVFILFVGIFFADNEAAVMFSLTLGGWVAAL LVARLLRSTLIKGESTPFVMELPPYRIPTLRGLLIHTWERTWQYIKKAGTVILAISILLWVAMTFPELPDTQVAQFESQR QLITGQMEAAEAEGHDVAPMEEALAAVDAEEAMAGLRYSAAGRVGTAIESVTSVAGFDWRTNIALVGGIAAKEVIVSTLG TAYSLGEVDPEESGSLAERIANDPSWNPARALALMLFVLLYAPCFVAVVAIKQEAGSWGWAGFSVVFNTILAFAVATVVY QIGSL >Mature_725_residues MKITTIALAGNPNSGKTTAFNALTGARQHVGNYPGITVDKKEGRVRLDGREVHIIDLPGTYSLTAYTQEELVARSYVVDE RPDVVVDVLNSAALERNLYLAVQFLEMGVPVALGLNMMDEARKQGIEIDVARLSRTLGVPVRETVARSGEGVKELLQDAV EFGDSRSKQPWTPLEISYGADIDPVLRAMTARIESEKFLDKYPARWVAIKYIEGDEEMMRLGRDAGPLALELEAQVKEVA DHLQSTLNTYPEAVIADYRYGFIASVLRDGVVKRRDEMTDRIQFSDRLDKVLTHQLFGPLIMLGLLYLIYEITFAIGEIP MGWVEEMFGWLNETASAALPDGLLKSLIVSGIIDGVGGVMGFVPLILFMFLQIAFLEDSGYMARIAYMLDRVFRMFGLHG CSVMPFIVSGGIAGGCAVPGVMATRTLRSRKEKLATLITAPFMACGAKVPVFILFVGIFFADNEAAVMFSLTLGGWVAAL LVARLLRSTLIKGESTPFVMELPPYRIPTLRGLLIHTWERTWQYIKKAGTVILAISILLWVAMTFPELPDTQVAQFESQR QLITGQMEAAEAEGHDVAPMEEALAAVDAEEAMAGLRYSAAGRVGTAIESVTSVAGFDWRTNIALVGGIAAKEVIVSTLG TAYSLGEVDPEESGSLAERIANDPSWNPARALALMLFVLLYAPCFVAVVAIKQEAGSWGWAGFSVVFNTILAFAVATVVY QIGSL
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=788, Percent_Identity=32.8680203045685, Blast_Score=345, Evalue=7e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007167 - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF04023 FeoA; PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 79120; Mature: 79120
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTIALAGNPNSGKTTAFNALTGARQHVGNYPGITVDKKEGRVRLDGREVHIIDLPGT CEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCEEEEEECCCC YSLTAYTQEELVARSYVVDERPDVVVDVLNSAALERNLYLAVQFLEMGVPVALGLNMMDE CEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHH ARKQGIEIDVARLSRTLGVPVRETVARSGEGVKELLQDAVEFGDSRSKQPWTPLEISYGA HHHCCCEEEHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCC DIDPVLRAMTARIESEKFLDKYPARWVAIKYIEGDEEMMRLGRDAGPLALELEAQVKEVA CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCEEEEHHHHHHHHH DHLQSTLNTYPEAVIADYRYGFIASVLRDGVVKRRDEMTDRIQFSDRLDKVLTHQLFGPL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLGLLYLIYEITFAIGEIPMGWVEEMFGWLNETASAALPDGLLKSLIVSGIIDGVGGVM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GFVPLILFMFLQIAFLEDSGYMARIAYMLDRVFRMFGLHGCSVMPFIVSGGIAGGCAVPG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHCCH VMATRTLRSRKEKLATLITAPFMACGAKVPVFILFVGIFFADNEAAVMFSLTLGGWVAAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH LVARLLRSTLIKGESTPFVMELPPYRIPTLRGLLIHTWERTWQYIKKAGTVILAISILLW HHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAMTFPELPDTQVAQFESQRQLITGQMEAAEAEGHDVAPMEEALAAVDAEEAMAGLRYSA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHCCHHHC AGRVGTAIESVTSVAGFDWRTNIALVGGIAAKEVIVSTLGTAYSLGEVDPEESGSLAERI CCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHH ANDPSWNPARALALMLFVLLYAPCFVAVVAIKQEAGSWGWAGFSVVFNTILAFAVATVVY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QIGSL HHCCC >Mature Secondary Structure MKITTIALAGNPNSGKTTAFNALTGARQHVGNYPGITVDKKEGRVRLDGREVHIIDLPGT CEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCEEEEEECCCC YSLTAYTQEELVARSYVVDERPDVVVDVLNSAALERNLYLAVQFLEMGVPVALGLNMMDE CEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHH ARKQGIEIDVARLSRTLGVPVRETVARSGEGVKELLQDAVEFGDSRSKQPWTPLEISYGA HHHCCCEEEHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCC DIDPVLRAMTARIESEKFLDKYPARWVAIKYIEGDEEMMRLGRDAGPLALELEAQVKEVA CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCEEEEHHHHHHHHH DHLQSTLNTYPEAVIADYRYGFIASVLRDGVVKRRDEMTDRIQFSDRLDKVLTHQLFGPL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLGLLYLIYEITFAIGEIPMGWVEEMFGWLNETASAALPDGLLKSLIVSGIIDGVGGVM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GFVPLILFMFLQIAFLEDSGYMARIAYMLDRVFRMFGLHGCSVMPFIVSGGIAGGCAVPG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHCCH VMATRTLRSRKEKLATLITAPFMACGAKVPVFILFVGIFFADNEAAVMFSLTLGGWVAAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH LVARLLRSTLIKGESTPFVMELPPYRIPTLRGLLIHTWERTWQYIKKAGTVILAISILLW HHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAMTFPELPDTQVAQFESQRQLITGQMEAAEAEGHDVAPMEEALAAVDAEEAMAGLRYSA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHCCHHHC AGRVGTAIESVTSVAGFDWRTNIALVGGIAAKEVIVSTLGTAYSLGEVDPEESGSLAERI CCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHH ANDPSWNPARALALMLFVLLYAPCFVAVVAIKQEAGSWGWAGFSVVFNTILAFAVATVVY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QIGSL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]