| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357540
Identifier: 78357540
GI number: 78357540
Start: 2520378
End: 2521433
Strand: Reverse
Name: 78357540
Synonym: Dde_2497
Alternate gene names: NA
Gene position: 2521433-2520378 (Counterclockwise)
Preceding gene: 78357541
Following gene: 78357539
Centisome position: 67.59
GC content: 54.55
Gene sequence:
>1056_bases ATGAGCAGGAAGAAAGCAGGCAAGGAAGTCTCCATCGTTCGCTCCTCGGCGGCGGAATACCTGACTTTTGTCGCCGCCAG CGGTAGTGGCGGCGTAGAAGCCGTTTATGCCGACGAAAGCATCTGGCTGACCCAAAAGATGATGGGTGTGCTTTACGATG TTGAGACCCACACGATCAACTACCACCTGAAAAAGGTGTTTTCAGACAGCGAGTTGCAGGAGGATTCAGTTATTCGAAAT TTTCGAATAACTGCTGCCGACGGCAAGACCTACAACACCAAACACTACAAACTGCCCGCAATCATCGCCGTGGGCTACAA GGTGAACTCCGAGCGCGCCGTGCAGTTCCGCAAGTGGGCTACGACCATCATCGACGAGTACACCATCAAGGCCTACGTGA TGGACGACGAGCGCATCAAGGCTGGCGGTTCTATCCTGACGGAACAATATTTTGAAGAGCAGTTGCAGCGCGTCCGCGAG ATCCGTCTCTCCGAGCGCAAGTTCTACCAGAAGATCACCGACATCTACGCCACCGCCATCGACTACGACGTCACCGCCCA GGCCACCAGGCGCTTTTTCGCCAACGTGCAGAACAAACTCCACTGGGCCATTCACGGGCAGACCGCGGCAGAGGTCATTG TCAACCGTGCCGATTCCGAGAAGCAGCACATGGGGCTGACCACCTGGAAGGATGCTCCGCAAGGGAAAATCCAGAAGTTT GACGTCAGCGTGGCCAAAAACTACCTAACCGAAGAGGAAATGGCTCAACTGTCTCGACTGGTCAATGCCTACCTGGATGT AGCTGAGGACATGGCCCTGCGCAAAATGCCCATGACCATGCAGGACTGGGAGACCCGCTTGAATAAGTTTATTGAAGCTA CCGACCGGGAAATCCTCCAGGATGCGGGCAAAGTCACGGCAGAGATCGCCAAAGCCCACGCCGAAAGCGAGTTTGAGAAA TACCGTATCGTTCAGGACCGGCTGTTTGAGAGCGATTTCGACCGGATGCTGAAACAGATCGAAGCCGTTCAGAAACCGGG AGGCGATGATGAATAA
Upstream 100 bases:
>100_bases GCGGGCATCTAGGAGCGAGGCAACCAACCCTTCAACAGCTGCCCCTGAAACGCCCTCTTCGCGTCTTCGCGCCTTCGCGT GCAACAAAAAGGGGCTGGGC
Downstream 100 bases:
>100_bases GCAAACCGCCCATCTGCTGGAACAGCACTTCGACACCGCCTTTGCCACGCCCGATGGCGTCACCAAGCTGCGCGAATTGA TCCTGACCCTCGCCATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSRKKAGKEVSIVRSSAAEYLTFVAASGSGGVEAVYADESIWLTQKMMGVLYDVETHTINYHLKKVFSDSELQEDSVIRN FRITAADGKTYNTKHYKLPAIIAVGYKVNSERAVQFRKWATTIIDEYTIKAYVMDDERIKAGGSILTEQYFEEQLQRVRE IRLSERKFYQKITDIYATAIDYDVTAQATRRFFANVQNKLHWAIHGQTAAEVIVNRADSEKQHMGLTTWKDAPQGKIQKF DVSVAKNYLTEEEMAQLSRLVNAYLDVAEDMALRKMPMTMQDWETRLNKFIEATDREILQDAGKVTAEIAKAHAESEFEK YRIVQDRLFESDFDRMLKQIEAVQKPGGDDE
Sequences:
>Translated_351_residues MSRKKAGKEVSIVRSSAAEYLTFVAASGSGGVEAVYADESIWLTQKMMGVLYDVETHTINYHLKKVFSDSELQEDSVIRN FRITAADGKTYNTKHYKLPAIIAVGYKVNSERAVQFRKWATTIIDEYTIKAYVMDDERIKAGGSILTEQYFEEQLQRVRE IRLSERKFYQKITDIYATAIDYDVTAQATRRFFANVQNKLHWAIHGQTAAEVIVNRADSEKQHMGLTTWKDAPQGKIQKF DVSVAKNYLTEEEMAQLSRLVNAYLDVAEDMALRKMPMTMQDWETRLNKFIEATDREILQDAGKVTAEIAKAHAESEFEK YRIVQDRLFESDFDRMLKQIEAVQKPGGDDE >Mature_350_residues SRKKAGKEVSIVRSSAAEYLTFVAASGSGGVEAVYADESIWLTQKMMGVLYDVETHTINYHLKKVFSDSELQEDSVIRNF RITAADGKTYNTKHYKLPAIIAVGYKVNSERAVQFRKWATTIIDEYTIKAYVMDDERIKAGGSILTEQYFEEQLQRVREI RLSERKFYQKITDIYATAIDYDVTAQATRRFFANVQNKLHWAIHGQTAAEVIVNRADSEKQHMGLTTWKDAPQGKIQKFD VSVAKNYLTEEEMAQLSRLVNAYLDVAEDMALRKMPMTMQDWETRLNKFIEATDREILQDAGKVTAEIAKAHAESEFEKY RIVQDRLFESDFDRMLKQIEAVQKPGGDDE
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40310; Mature: 40179
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKKAGKEVSIVRSSAAEYLTFVAASGSGGVEAVYADESIWLTQKMMGVLYDVETHTIN CCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCHHHHHH YHLKKVFSDSELQEDSVIRNFRITAADGKTYNTKHYKLPAIIAVGYKVNSERAVQFRKWA HHHHHHHCCCCCCHHHHHHEEEEEECCCCEECCCCEECCEEEEEEEEECCHHHHHHHHHH TTIIDEYTIKAYVMDDERIKAGGSILTEQYFEEQLQRVREIRLSERKFYQKITDIYATAI HHHHHHHEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYDVTAQATRRFFANVQNKLHWAIHGQTAAEVIVNRADSEKQHMGLTTWKDAPQGKIQKF CCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHH DVSVAKNYLTEEEMAQLSRLVNAYLDVAEDMALRKMPMTMQDWETRLNKFIEATDREILQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DAGKVTAEIAKAHAESEFEKYRIVQDRLFESDFDRMLKQIEAVQKPGGDDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRKKAGKEVSIVRSSAAEYLTFVAASGSGGVEAVYADESIWLTQKMMGVLYDVETHTIN CCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCHHHHHH YHLKKVFSDSELQEDSVIRNFRITAADGKTYNTKHYKLPAIIAVGYKVNSERAVQFRKWA HHHHHHHCCCCCCHHHHHHEEEEEECCCCEECCCCEECCEEEEEEEEECCHHHHHHHHHH TTIIDEYTIKAYVMDDERIKAGGSILTEQYFEEQLQRVREIRLSERKFYQKITDIYATAI HHHHHHHEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYDVTAQATRRFFANVQNKLHWAIHGQTAAEVIVNRADSEKQHMGLTTWKDAPQGKIQKF CCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHH DVSVAKNYLTEEEMAQLSRLVNAYLDVAEDMALRKMPMTMQDWETRLNKFIEATDREILQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DAGKVTAEIAKAHAESEFEKYRIVQDRLFESDFDRMLKQIEAVQKPGGDDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA