Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357484

Identifier: 78357484

GI number: 78357484

Start: 2462365

End: 2463339

Strand: Direct

Name: 78357484

Synonym: Dde_2441

Alternate gene names: NA

Gene position: 2462365-2463339 (Clockwise)

Preceding gene: 78357483

Following gene: 78357485

Centisome position: 66.01

GC content: 61.95

Gene sequence:

>975_bases
ATGGCAAAAGACGGATTCAGTTTCATCGTATGTCCCGACGGGCAGCTTCTGCGCGACCGTATCGAAGGACAGCTTGCGGC
ACACTCCTCTTCGCACGGTGCATGGGAACGTCACGTCTACTGGGGCGACGAGGGACTGGCCGCTTCGTTCTGGGAACACC
TGACCCTGCAGGGGCTATTTGCCACTCCCAAGGCACTGGTTGTCCGCAATGCCCAGAACCTTGCCGCCGCGGACTGGAAG
AAGCTCAGCGAGTCATTGCGGCAGGCATCGCCCACTTCATGGGCGTTCATCTGTCTGGAGGTTGCTTTTGAGCGCGGCAA
GGCAAAAGTGCCGGCTGCCGTACAAAAAACAGCCTGCTGGAAGTTCGCCTCCGGACAGGGCTGGATTTGGGAATCGCCCG
GTCTGGACGAACGCAGCCTGCAGGGATTTGCTTCGGCCTGGGCGCAGAAACGCGGGGTACGCTTTGCTCCCGGCGCTCTG
CCGGCCATATGCGCCGCCCTGCCCGCCGATGCCACCGCAGCCCGGAACGAACTGGAAAAACTGGCTCTGGCGGCAGGAGC
CGACGGTGTCATAAGCGCCGATACATCGGCACTGGGCGACCACGCGGCCGATCTGGATATTTTCGGATTCATACGGGCTG
TTCAGTCCGGCACCCAGCACGACAAAGTATGGCGCAAAGTCATGGGCAGCAGTTCCGCCAACGACGGTCTCGTCTTTCAG
TTTCTGGGCATGCTGCAGCGCGAAGCCCGCATGATGTGGCAGCTGCTCTCCGGCGAATCCGTCCGCCTGCCCGCGGCGGT
GCTCCAGTCCAAAACCCGCACGGCGCAGCAGCTGCGGTACCGCGGAATCATGCGTATGTGGGATCTGGCACTGGAGGCGG
AAAAAGGCATAAAGTCGGGTGAGCGCTCTCCCGATCAGGCCATGGAAGCCCTTATCGGTGGCCTGCTGGCGCTTTTTGCA
CCCCGCAGGCCATAG

Upstream 100 bases:

>100_bases
CTAGACCCTTCATACAGCCATCGTATATAACGCCCGGAGACCGATAGGCTCTCCGGGCGTTTTTCAACCACCAACCAGCA
AACAGGCACTACCCGCAACC

Downstream 100 bases:

>100_bases
CATGGCCGTCATGACGGTATTTTTCCGCCATGTTTCCTTCCTGTCGCAGGATTTTTCTCTTTTTCAGACGCAAATCACCC
TTTTTTACACTGTAAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MAKDGFSFIVCPDGQLLRDRIEGQLAAHSSSHGAWERHVYWGDEGLAASFWEHLTLQGLFATPKALVVRNAQNLAAADWK
KLSESLRQASPTSWAFICLEVAFERGKAKVPAAVQKTACWKFASGQGWIWESPGLDERSLQGFASAWAQKRGVRFAPGAL
PAICAALPADATAARNELEKLALAAGADGVISADTSALGDHAADLDIFGFIRAVQSGTQHDKVWRKVMGSSSANDGLVFQ
FLGMLQREARMMWQLLSGESVRLPAAVLQSKTRTAQQLRYRGIMRMWDLALEAEKGIKSGERSPDQAMEALIGGLLALFA
PRRP

Sequences:

>Translated_324_residues
MAKDGFSFIVCPDGQLLRDRIEGQLAAHSSSHGAWERHVYWGDEGLAASFWEHLTLQGLFATPKALVVRNAQNLAAADWK
KLSESLRQASPTSWAFICLEVAFERGKAKVPAAVQKTACWKFASGQGWIWESPGLDERSLQGFASAWAQKRGVRFAPGAL
PAICAALPADATAARNELEKLALAAGADGVISADTSALGDHAADLDIFGFIRAVQSGTQHDKVWRKVMGSSSANDGLVFQ
FLGMLQREARMMWQLLSGESVRLPAAVLQSKTRTAQQLRYRGIMRMWDLALEAEKGIKSGERSPDQAMEALIGGLLALFA
PRRP
>Mature_323_residues
AKDGFSFIVCPDGQLLRDRIEGQLAAHSSSHGAWERHVYWGDEGLAASFWEHLTLQGLFATPKALVVRNAQNLAAADWKK
LSESLRQASPTSWAFICLEVAFERGKAKVPAAVQKTACWKFASGQGWIWESPGLDERSLQGFASAWAQKRGVRFAPGALP
AICAALPADATAARNELEKLALAAGADGVISADTSALGDHAADLDIFGFIRAVQSGTQHDKVWRKVMGSSSANDGLVFQF
LGMLQREARMMWQLLSGESVRLPAAVLQSKTRTAQQLRYRGIMRMWDLALEAEKGIKSGERSPDQAMEALIGGLLALFAP
RRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35234; Mature: 35102

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDGFSFIVCPDGQLLRDRIEGQLAAHSSSHGAWERHVYWGDEGLAASFWEHLTLQGLF
CCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
ATPKALVVRNAQNLAAADWKKLSESLRQASPTSWAFICLEVAFERGKAKVPAAVQKTACW
CCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
KFASGQGWIWESPGLDERSLQGFASAWAQKRGVRFAPGALPAICAALPADATAARNELEK
EECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
LALAAGADGVISADTSALGDHAADLDIFGFIRAVQSGTQHDKVWRKVMGSSSANDGLVFQ
HHHHCCCCCCEECCCHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHH
FLGMLQREARMMWQLLSGESVRLPAAVLQSKTRTAQQLRYRGIMRMWDLALEAEKGIKSG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERSPDQAMEALIGGLLALFAPRRP
CCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKDGFSFIVCPDGQLLRDRIEGQLAAHSSSHGAWERHVYWGDEGLAASFWEHLTLQGLF
CCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
ATPKALVVRNAQNLAAADWKKLSESLRQASPTSWAFICLEVAFERGKAKVPAAVQKTACW
CCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
KFASGQGWIWESPGLDERSLQGFASAWAQKRGVRFAPGALPAICAALPADATAARNELEK
EECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
LALAAGADGVISADTSALGDHAADLDIFGFIRAVQSGTQHDKVWRKVMGSSSANDGLVFQ
HHHHCCCCCCEECCCHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHH
FLGMLQREARMMWQLLSGESVRLPAAVLQSKTRTAQQLRYRGIMRMWDLALEAEKGIKSG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERSPDQAMEALIGGLLALFAPRRP
CCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA