| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357483
Identifier: 78357483
GI number: 78357483
Start: 2461711
End: 2462268
Strand: Direct
Name: 78357483
Synonym: Dde_2440
Alternate gene names: NA
Gene position: 2461711-2462268 (Clockwise)
Preceding gene: 78357482
Following gene: 78357484
Centisome position: 65.99
GC content: 60.57
Gene sequence:
>558_bases ATGTCGTCGCAAGCTGACAACATACGCGCCCGTACGCGCGGCGCGTCCGCCATACGCACAGCGGTACTGTGCGCCGTGCT GGCCTGTGTGCTTTTTGCGCTGCAGGGCTGCGGCGGCTACCGGCTGGCTGCGGACGAACCTTCCGTGTTCGGCGGACCGC AGGCCACCATCCGCATACGCGAAGTGGTCAACCCCTCGCTGTTTCCGTGGGTCGGTGCCGTCATCCGCGCTGAAATGCGC GACGAGATAACCAACAGGCACATGGCCACATGGAAAGACAACGGCAGAACGGACTACTCCATAGCTGTCATTGTGGATAA AATCACAGTGACCGGACGCGCCACAGATACGGATGATTCCGACCGTCTGTTCAGCGCATCGGTTTCGCTCAAGGCTGCCG TGTATGACGACAACACCAACACCGTTGTCTGGGATTCCGGCTTCACCTCCGTCAGCGAAACCTACCGGACGTTTTCCGGC ACAGACCAGCAGGCCGCCTACTCCGCGGTGCGCAAAGCCACGCAGTATGTGGTGGACAGAATGCGACACAGCTTCTAG
Upstream 100 bases:
>100_bases GAAGAGCTTGAAAAGCTTGCTCTTGCAGAAGCCAACGTGGTACGCCATACCGAAGGACTCACCGTCCGCAAGGTAATTGT CATTCCGGGGAAAATGGTCA
Downstream 100 bases:
>100_bases ACCCTTCATACAGCCATCGTATATAACGCCCGGAGACCGATAGGCTCTCCGGGCGTTTTTCAACCACCAACCAGCAAACA GGCACTACCCGCAACCATGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSSQADNIRARTRGASAIRTAVLCAVLACVLFALQGCGGYRLAADEPSVFGGPQATIRIREVVNPSLFPWVGAVIRAEMR DEITNRHMATWKDNGRTDYSIAVIVDKITVTGRATDTDDSDRLFSASVSLKAAVYDDNTNTVVWDSGFTSVSETYRTFSG TDQQAAYSAVRKATQYVVDRMRHSF
Sequences:
>Translated_185_residues MSSQADNIRARTRGASAIRTAVLCAVLACVLFALQGCGGYRLAADEPSVFGGPQATIRIREVVNPSLFPWVGAVIRAEMR DEITNRHMATWKDNGRTDYSIAVIVDKITVTGRATDTDDSDRLFSASVSLKAAVYDDNTNTVVWDSGFTSVSETYRTFSG TDQQAAYSAVRKATQYVVDRMRHSF >Mature_184_residues SSQADNIRARTRGASAIRTAVLCAVLACVLFALQGCGGYRLAADEPSVFGGPQATIRIREVVNPSLFPWVGAVIRAEMRD EITNRHMATWKDNGRTDYSIAVIVDKITVTGRATDTDDSDRLFSASVSLKAAVYDDNTNTVVWDSGFTSVSETYRTFSGT DQQAAYSAVRKATQYVVDRMRHSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20258; Mature: 20127
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQADNIRARTRGASAIRTAVLCAVLACVLFALQGCGGYRLAADEPSVFGGPQATIRIR CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEH EVVNPSLFPWVGAVIRAEMRDEITNRHMATWKDNGRTDYSIAVIVDKITVTGRATDTDDS HHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCC DRLFSASVSLKAAVYDDNTNTVVWDSGFTSVSETYRTFSGTDQQAAYSAVRKATQYVVDR CCEEEECCEEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MRHSF HHHCC >Mature Secondary Structure SSQADNIRARTRGASAIRTAVLCAVLACVLFALQGCGGYRLAADEPSVFGGPQATIRIR CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEH EVVNPSLFPWVGAVIRAEMRDEITNRHMATWKDNGRTDYSIAVIVDKITVTGRATDTDDS HHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCC DRLFSASVSLKAAVYDDNTNTVVWDSGFTSVSETYRTFSGTDQQAAYSAVRKATQYVVDR CCEEEECCEEEEEEEECCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MRHSF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA