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The map label for this gene is yhaM [H]

Identifier: 78357382

GI number: 78357382

Start: 2357798

End: 2358841

Strand: Reverse

Name: yhaM [H]

Synonym: Dde_2339

Alternate gene names: 78357382

Gene position: 2358841-2357798 (Counterclockwise)

Preceding gene: 78357386

Following gene: 78357381

Centisome position: 63.24

GC content: 56.51

Gene sequence:

>1044_bases
ATGTACATGGAAAAAAGACAATTCATCAAAGATATTGCTGTTAATGGCGACGTGAACGGGCTGTTCCTCATTGCTTCCGC
CAACCAGATGCAGGCAAAGAACGGCCCTTTCTGGCGTCTTGAAATCTGCGACGCTTCCGGCACGCTTAATGCCAAAATAT
GGAGCCCGCTCAGTGCCTCGTTTGAAACCCTTACCCCCGGCGACGTGGTGCATCTGGAAGGCCGGGCAGGGCTTTTCCGC
GACAGGATAGACATCAGCGTGGACCGCATGCGCGTGCTTGCCCCCTACGAACTGGAAGCCCTTGATATGGGGCAGTTTCT
GGTTTCCAGCGAGCGTGACCCCGCCGAGATGCTGACCGAACTGCTGGAGCTGTGCCGGGAGGTGTTCACCCACCGGCCGT
GGCGCAAGTTTGTCACCGGCGTGCTGCGCAACGAAGAACTTGCAGAGGCGCTCAAGGCGGCACCTGCAGCCAAAAGCGTG
CACCACGCCTACAGAGGCGGTCTGCTTGAGCATATCCTTTCTGTTTCGGGGCTGTGCATGCGCATTGCCGACCACTATCC
CGAAATTGACAGGCAGGTACTGCTGGCAGGCGCGATTTTTCATGATATAGGCAAGGCGTGGGAACTGTCCGGCGGGCTGG
TCAACGACTACACAGACGAAGGCCGCCTGCTGGGGCATATCCATATAGGCCTTGAACAGCTGGAGCCGTTTTTGCGCAGG
TCCGGTCTTGAGCACGAACTTGCCGTGCATTTCAAGCATCTGATTCTCAGCCACCACGGCGAATATGAGTTCGGCTCGCC
GCGCCGACCCAAAACGCGCGAGGCAATGGTGCTTCATTACGCCGACAATCTGGATGCCAAAATGGCTCAGCTGAACAGTC
TGTTCAAAGGATTTGAGGACGGTGAGACCGGCTGGACGCCGTTTCAGCCCACATTGCAGCGCTTTTTGTACAACCCTGTG
CGCACTCCGGAAACGGAAACCGTCAGACGGAAGCGTCCTGAAACTCCACGGGAAGAACAATGTTCATTACTTTCGAAGGG
ATAG

Upstream 100 bases:

>100_bases
CTGGCAAGCCGGACTGAAAATTGATAATGGTCCGTGAATCGATAACGCAACCCCGCTCATCAGGAGACAGCCGCGTCGGA
CGGCTGACGTTTTGCATACG

Downstream 100 bases:

>100_bases
AAGGTTCAGGCAAAAGTACGGCTCTTGCCCGCCTGAAGGACTGGCTGCAGGAGCACGGCCACGGTGCGACGCTGACCCGC
GAGCCGGGAGGCAGCCGTCT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MYMEKRQFIKDIAVNGDVNGLFLIASANQMQAKNGPFWRLEICDASGTLNAKIWSPLSASFETLTPGDVVHLEGRAGLFR
DRIDISVDRMRVLAPYELEALDMGQFLVSSERDPAEMLTELLELCREVFTHRPWRKFVTGVLRNEELAEALKAAPAAKSV
HHAYRGGLLEHILSVSGLCMRIADHYPEIDRQVLLAGAIFHDIGKAWELSGGLVNDYTDEGRLLGHIHIGLEQLEPFLRR
SGLEHELAVHFKHLILSHHGEYEFGSPRRPKTREAMVLHYADNLDAKMAQLNSLFKGFEDGETGWTPFQPTLQRFLYNPV
RTPETETVRRKRPETPREEQCSLLSKG

Sequences:

>Translated_347_residues
MYMEKRQFIKDIAVNGDVNGLFLIASANQMQAKNGPFWRLEICDASGTLNAKIWSPLSASFETLTPGDVVHLEGRAGLFR
DRIDISVDRMRVLAPYELEALDMGQFLVSSERDPAEMLTELLELCREVFTHRPWRKFVTGVLRNEELAEALKAAPAAKSV
HHAYRGGLLEHILSVSGLCMRIADHYPEIDRQVLLAGAIFHDIGKAWELSGGLVNDYTDEGRLLGHIHIGLEQLEPFLRR
SGLEHELAVHFKHLILSHHGEYEFGSPRRPKTREAMVLHYADNLDAKMAQLNSLFKGFEDGETGWTPFQPTLQRFLYNPV
RTPETETVRRKRPETPREEQCSLLSKG
>Mature_347_residues
MYMEKRQFIKDIAVNGDVNGLFLIASANQMQAKNGPFWRLEICDASGTLNAKIWSPLSASFETLTPGDVVHLEGRAGLFR
DRIDISVDRMRVLAPYELEALDMGQFLVSSERDPAEMLTELLELCREVFTHRPWRKFVTGVLRNEELAEALKAAPAAKSV
HHAYRGGLLEHILSVSGLCMRIADHYPEIDRQVLLAGAIFHDIGKAWELSGGLVNDYTDEGRLLGHIHIGLEQLEPFLRR
SGLEHELAVHFKHLILSHHGEYEFGSPRRPKTREAMVLHYADNLDAKMAQLNSLFKGFEDGETGWTPFQPTLQRFLYNPV
RTPETETVRRKRPETPREEQCSLLSKG

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhaM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 39381; Mature: 39381

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMEKRQFIKDIAVNGDVNGLFLIASANQMQAKNGPFWRLEICDASGTLNAKIWSPLSAS
CCCHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCEEEEEEECCCCCCCEEECCCCCCC
FETLTPGDVVHLEGRAGLFRDRIDISVDRMRVLAPYELEALDMGQFLVSSERDPAEMLTE
CCCCCCCCEEEECCCCCCHHHHCCCCHHHEEEECCCCCCHHHHHHHHHCCCCCHHHHHHH
LLELCREVFTHRPWRKFVTGVLRNEELAEALKAAPAAKSVHHAYRGGLLEHILSVSGLCM
HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIADHYPEIDRQVLLAGAIFHDIGKAWELSGGLVNDYTDEGRLLGHIHIGLEQLEPFLRR
HHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHH
SGLEHELAVHFKHLILSHHGEYEFGSPRRPKTREAMVLHYADNLDAKMAQLNSLFKGFED
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC
GETGWTPFQPTLQRFLYNPVRTPETETVRRKRPETPREEQCSLLSKG
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYMEKRQFIKDIAVNGDVNGLFLIASANQMQAKNGPFWRLEICDASGTLNAKIWSPLSAS
CCCHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCEEEEEEECCCCCCCEEECCCCCCC
FETLTPGDVVHLEGRAGLFRDRIDISVDRMRVLAPYELEALDMGQFLVSSERDPAEMLTE
CCCCCCCCEEEECCCCCCHHHHCCCCHHHEEEECCCCCCHHHHHHHHHCCCCCHHHHHHH
LLELCREVFTHRPWRKFVTGVLRNEELAEALKAAPAAKSVHHAYRGGLLEHILSVSGLCM
HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIADHYPEIDRQVLLAGAIFHDIGKAWELSGGLVNDYTDEGRLLGHIHIGLEQLEPFLRR
HHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHH
SGLEHELAVHFKHLILSHHGEYEFGSPRRPKTREAMVLHYADNLDAKMAQLNSLFKGFED
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC
GETGWTPFQPTLQRFLYNPVRTPETETVRRKRPETPREEQCSLLSKG
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA