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The map label for this gene is yuxH [H]

Identifier: 78357386

GI number: 78357386

Start: 2362136

End: 2363431

Strand: Reverse

Name: yuxH [H]

Synonym: Dde_2343

Alternate gene names: 78357386

Gene position: 2363431-2362136 (Counterclockwise)

Preceding gene: 78357387

Following gene: 78357382

Centisome position: 63.36

GC content: 59.88

Gene sequence:

>1296_bases
ATGTTGCTGAAGCATTTGCGCAGCCTGCTTTCAAAGTCGCAGGGGGCTGTGGTGCAGGATGACGGCGTCATCACCACGGT
TTCGGGGGTACCCGTATGGGTGGCGCGGCAGCCTGTTTTTACGGCTCAGGGCGGCATATGGGGGTATGAACTGCTTTCGC
GGGTGTGTCCCGAAAATGTCTGCAGACCGGCGGAGGATGCGTATGTGGCCACATCGTCCGTGGTGTTCGACGGCGTAGAG
ATGGTGGCACCGGCACTTGCCGCCGGAGAACGTCTGCTGATCAACTACAGTGGCGAAATGCTGGTGGACGGTGTGCCTGC
CATGCTGCCTCCCGATATATGCGTGGTTGAAGTGCTGGAAGACGTGCAGCCGACGCAGGAGGTGCTGGCCGCACTGCTGC
GGTTGCGGCAGGCCGGGTACATGGTGGCGCTGGATGACTATATAGGGCAGGAGGCTGCAGAAACGCTTATGCCTCTTGCC
GATATCGTCAAGGTTGACGTGCTGGGGCGTGAGCGTGAAGCCATTGCCCGCGATGTCGCCCGAATCAGACCGTACGGATG
CACTCTGCTGGCAGAAAAAGTGGAAGACCGGCAGATGGTTGATCTGTGTGCGGAGTTGGGCTTTGACCTGTTTCAGGGTT
TTTTTTTCAGCAGGCCGCAGCTGGTGGCGGGAAAAAAGCTGACATCCTCGGAAACGGTCAAGACCCGGCTTCTGGCCCGT
ATGGCTTCCGGCGAATACGATATGGCCGAACTGGGAGACATCATCAGGATTGACGCCGCTCTCAGCACACGGCTTCTGCG
CTATCTCAATTCTGCATTTTTCGCTCTGCCTTCGCCGGTGGTTTCCGTTTCGCAGGCTGCGGGGCTGCTCGGGCAGGAAA
AGCTGCGCCGGTGGCTCTGCGTTGCCATACTGTCAGATATGGAGTCTTCGCCGCTGTCGCGTCATGTGGCTGTTCAGGCC
GCGCAGCGCGGAAAATTTCTTGAGCTGGTCTGCGGTACAGGCTGCGGACGCCCCGCATCGGAAATGTTTATGCTCGGATT
GCTCTCCATGCTTGACGGATTGCTGTCTGTCTCCATGGAGTCCGTCATTGCGGGCATGCCTCTGGATGAGCAGCTGACAG
ACGCCCTTTTGGGGCGGCCGGGCCCGCTGCTGCCGTGGCTGCGGTTTGCCGCGGCATACGAGAAAGGTGACTGGCAGCAG
GCTGCGGAGCTGGCGCGCAGGCTTGGGGTAAGTGGCGAAGAGGTGAGCCGCTGTTACAGCGAGGCCATAAGCTGGGCTGC
AGTCATGTTTGCCTGA

Upstream 100 bases:

>100_bases
CCTGTTATAGTAATACCTCATCTGGCCACTGTGCCGCCGGTGACACGGCTGTTCAGGCATGCCGGTGTTCCGCTGATATT
CTGTTTTTCCGGAGAGGGTC

Downstream 100 bases:

>100_bases
CGCTGACAGCAGATGTGAAAAAAGCCCGTCGCACATGTGTGCGGCGGGCTTTTGGCATATATGTACGAAAAAAGGCCTAC
AGGCTGTTGCCGACCTTGCG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLLKHLRSLLSKSQGAVVQDDGVITTVSGVPVWVARQPVFTAQGGIWGYELLSRVCPENVCRPAEDAYVATSSVVFDGVE
MVAPALAAGERLLINYSGEMLVDGVPAMLPPDICVVEVLEDVQPTQEVLAALLRLRQAGYMVALDDYIGQEAAETLMPLA
DIVKVDVLGREREAIARDVARIRPYGCTLLAEKVEDRQMVDLCAELGFDLFQGFFFSRPQLVAGKKLTSSETVKTRLLAR
MASGEYDMAELGDIIRIDAALSTRLLRYLNSAFFALPSPVVSVSQAAGLLGQEKLRRWLCVAILSDMESSPLSRHVAVQA
AQRGKFLELVCGTGCGRPASEMFMLGLLSMLDGLLSVSMESVIAGMPLDEQLTDALLGRPGPLLPWLRFAAAYEKGDWQQ
AAELARRLGVSGEEVSRCYSEAISWAAVMFA

Sequences:

>Translated_431_residues
MLLKHLRSLLSKSQGAVVQDDGVITTVSGVPVWVARQPVFTAQGGIWGYELLSRVCPENVCRPAEDAYVATSSVVFDGVE
MVAPALAAGERLLINYSGEMLVDGVPAMLPPDICVVEVLEDVQPTQEVLAALLRLRQAGYMVALDDYIGQEAAETLMPLA
DIVKVDVLGREREAIARDVARIRPYGCTLLAEKVEDRQMVDLCAELGFDLFQGFFFSRPQLVAGKKLTSSETVKTRLLAR
MASGEYDMAELGDIIRIDAALSTRLLRYLNSAFFALPSPVVSVSQAAGLLGQEKLRRWLCVAILSDMESSPLSRHVAVQA
AQRGKFLELVCGTGCGRPASEMFMLGLLSMLDGLLSVSMESVIAGMPLDEQLTDALLGRPGPLLPWLRFAAAYEKGDWQQ
AAELARRLGVSGEEVSRCYSEAISWAAVMFA
>Mature_431_residues
MLLKHLRSLLSKSQGAVVQDDGVITTVSGVPVWVARQPVFTAQGGIWGYELLSRVCPENVCRPAEDAYVATSSVVFDGVE
MVAPALAAGERLLINYSGEMLVDGVPAMLPPDICVVEVLEDVQPTQEVLAALLRLRQAGYMVALDDYIGQEAAETLMPLA
DIVKVDVLGREREAIARDVARIRPYGCTLLAEKVEDRQMVDLCAELGFDLFQGFFFSRPQLVAGKKLTSSETVKTRLLAR
MASGEYDMAELGDIIRIDAALSTRLLRYLNSAFFALPSPVVSVSQAAGLLGQEKLRRWLCVAILSDMESSPLSRHVAVQA
AQRGKFLELVCGTGCGRPASEMFMLGLLSMLDGLLSVSMESVIAGMPLDEQLTDALLGRPGPLLPWLRFAAAYEKGDWQQ
AAELARRLGVSGEEVSRCYSEAISWAAVMFA

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46792; Mature: 46792

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKHLRSLLSKSQGAVVQDDGVITTVSGVPVWVARQPVFTAQGGIWGYELLSRVCPENV
CHHHHHHHHHHCCCCCEEECCCEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHCCHHH
CRPAEDAYVATSSVVFDGVEMVAPALAAGERLLINYSGEMLVDGVPAMLPPDICVVEVLE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHH
DVQPTQEVLAALLRLRQAGYMVALDDYIGQEAAETLMPLADIVKVDVLGREREAIARDVA
HCCHHHHHHHHHHHHHHCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RIRPYGCTLLAEKVEDRQMVDLCAELGFDLFQGFFFSRPQLVAGKKLTSSETVKTRLLAR
HHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH
MASGEYDMAELGDIIRIDAALSTRLLRYLNSAFFALPSPVVSVSQAAGLLGQEKLRRWLC
HHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VAILSDMESSPLSRHVAVQAAQRGKFLELVCGTGCGRPASEMFMLGLLSMLDGLLSVSME
HHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVIAGMPLDEQLTDALLGRPGPLLPWLRFAAAYEKGDWQQAAELARRLGVSGEEVSRCYS
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
EAISWAAVMFA
HHHHHHHHHCC
>Mature Secondary Structure
MLLKHLRSLLSKSQGAVVQDDGVITTVSGVPVWVARQPVFTAQGGIWGYELLSRVCPENV
CHHHHHHHHHHCCCCCEEECCCEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHCCHHH
CRPAEDAYVATSSVVFDGVEMVAPALAAGERLLINYSGEMLVDGVPAMLPPDICVVEVLE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHH
DVQPTQEVLAALLRLRQAGYMVALDDYIGQEAAETLMPLADIVKVDVLGREREAIARDVA
HCCHHHHHHHHHHHHHHCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RIRPYGCTLLAEKVEDRQMVDLCAELGFDLFQGFFFSRPQLVAGKKLTSSETVKTRLLAR
HHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH
MASGEYDMAELGDIIRIDAALSTRLLRYLNSAFFALPSPVVSVSQAAGLLGQEKLRRWLC
HHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VAILSDMESSPLSRHVAVQAAQRGKFLELVCGTGCGRPASEMFMLGLLSMLDGLLSVSME
HHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVIAGMPLDEQLTDALLGRPGPLLPWLRFAAAYEKGDWQQAAELARRLGVSGEEVSRCYS
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
EAISWAAVMFA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]