Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78357219

Identifier: 78357219

GI number: 78357219

Start: 2216061

End: 2217695

Strand: Reverse

Name: 78357219

Synonym: Dde_2176

Alternate gene names: NA

Gene position: 2217695-2216061 (Counterclockwise)

Preceding gene: 78357221

Following gene: 78357218

Centisome position: 59.45

GC content: 61.04

Gene sequence:

>1635_bases
ATGCGCAGGATAGTAATTGTGGGGGAAGGCGCCGCAGCGGCCAAGCTGGCGGCCCGGACAAGACGGATGACGGAGAACGC
CGAGGTGAATCTGGTGCTGTCTTCCGCCGGCGACGCCGGCAAGGGGGTTTTCGGCAGCTATGCGAAAAAGAACCGCATTT
CGCTTGAACAGATGAAAACCCGTGATGTGGGCGTGCTGGAAACGGATGAGCTGGATTTTGATTTTGAAAAGCGTGAAATC
CACGTGCGCTCGGCCAGAGGCTGGCTGCCCATGCGTTTTGACCAGCTGGTGCTGGAAATAAACACCGTTCCCCGTGTACC
CAGAGCGTTGCGCCGCTGTGACAATGTTGTTCCCTGGCCGGTGGGAGATGTGGCGGCGCTTGATACCATTCTGGCAGAAA
TCCGCCCCTCTGTTGCTGTAGTGGTGGGAAGCAGCCGTCAGGCTGTGGAACTTGTCCGGCTTCTCGCCTCTTCGGACGTT
CCCGTGCGCTGGTTGCGCACCGCCCCTGCGCAGTCACCGGTGCTTGATGCCGATATGTGGTTCCATGCCGATTCGCTGAT
AACTGCCTGTGCCGGCGGAGTACAGATTCTCGACTGGAGCAGTTTCCGCCTTGACCAGCTGGCCACGGTGACGGACGCGG
ACGGCCTGCTGGTTTCACTGGAGTCGCCGGAAGCACAAAGCGTGAGCGGCGACATGTTTTTCTGGGCGGACCCGCAGCGG
GCCGTGCATCCGCTGCTGGCCAACGAAGGCATCGAGCTTGCCGAAAACGGCCTGCTGGCTGTGGATGACAATTTCATGAC
CGGTATACCGGATGTATACGCCATCGGCAGTGCTGTTTCCGTAAAGCACTGCGGGGCAGCGCAGCTGCCTGTGGTGGCCG
GTGAAGAATCTGTTTTCTCCATGGCCCGCCATGTGGCTGATGTTCTTTCCGGTGAACAGCCTTTCTCTGCCGGGGCCATG
ATCGCTCCGGTGACGCAGGCTTTTCCCGGCGGCAGGCTGTTTAAAGCCGGTACCGGACTGGCCGAGGCTCTGGCTGCCGG
CATCGAAGCCGAATTTGCCATGCTGAAAACCGGCGGCGGGGCCGCAGGGCAGGCACCCTGTGCCGTAAAGCTGGTGGTGG
ATAAATCCACCCGCCGCGTTCTGGGGGTTCAGGCTGTATCGGGTGACCCCTGCGGGTTGTCCGACGGATTCGCTTCTGCC
GGGGCGCTGGCACTGTCCGGCGGCATGACGGTGGAAATGCTGGCGGCACTGGACCTGCCCGGCGAAAGCGGGCGCCTGCT
GCGTTCCGCTGCCTGCATTGTTGATAACAAGCTGCGGGGCAAAGTGTTCGGCATCAGCCCTGATGAACTGATAGCTTCCC
GCGCTGCCGGTGCGGAGTTTTTCACCCTTGATCTGCGGTCGCAGCCGGAGTGGAAAAAAGGACATATCGAAGACGCCTGC
AACATTCCTCTGCCCCAGCTGAAAGAGCGGCTGCAGGATGAAGTGCCCAGATTCACCCCGCTGGTCATCGTCGGCCGCAG
CTCTGATGATGCGTGGAGTGTGGCCTGTTATCTGGCAGGGCTGGGCGCAGGGCATGTCTATGTGCTGGACGGCGGCATGG
ATATGTGGCCCTATGAAACCGTCTCGCAGGGCTGA

Upstream 100 bases:

>100_bases
TAGGGTTTTATAAAAAAATAACTGATGCTGAAGAGCGCCTGCCGCCCCGTATCAGACGGTTGTGCGGCAGGATGTCCGGT
CACAGGAAGGAGCACGGATA

Downstream 100 bases:

>100_bases
TGCAGTGGGTACTGTCTGCAGAATGCCCGGTGTGGCATGTGATTTTTATGTATCGGGGCACTGCCTGTACGAAGAAGAGC
TGAACCCCGGTCTGGACGAG

Product: rhodanese-like protein

Products: NA

Alternate protein names: Co A Disulfide Reductase; NAD(FAD)-Dependent Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein; CoA-Disulfide Reductase

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MRRIVIVGEGAAAAKLAARTRRMTENAEVNLVLSSAGDAGKGVFGSYAKKNRISLEQMKTRDVGVLETDELDFDFEKREI
HVRSARGWLPMRFDQLVLEINTVPRVPRALRRCDNVVPWPVGDVAALDTILAEIRPSVAVVVGSSRQAVELVRLLASSDV
PVRWLRTAPAQSPVLDADMWFHADSLITACAGGVQILDWSSFRLDQLATVTDADGLLVSLESPEAQSVSGDMFFWADPQR
AVHPLLANEGIELAENGLLAVDDNFMTGIPDVYAIGSAVSVKHCGAAQLPVVAGEESVFSMARHVADVLSGEQPFSAGAM
IAPVTQAFPGGRLFKAGTGLAEALAAGIEAEFAMLKTGGGAAGQAPCAVKLVVDKSTRRVLGVQAVSGDPCGLSDGFASA
GALALSGGMTVEMLAALDLPGESGRLLRSAACIVDNKLRGKVFGISPDELIASRAAGAEFFTLDLRSQPEWKKGHIEDAC
NIPLPQLKERLQDEVPRFTPLVIVGRSSDDAWSVACYLAGLGAGHVYVLDGGMDMWPYETVSQG

Sequences:

>Translated_544_residues
MRRIVIVGEGAAAAKLAARTRRMTENAEVNLVLSSAGDAGKGVFGSYAKKNRISLEQMKTRDVGVLETDELDFDFEKREI
HVRSARGWLPMRFDQLVLEINTVPRVPRALRRCDNVVPWPVGDVAALDTILAEIRPSVAVVVGSSRQAVELVRLLASSDV
PVRWLRTAPAQSPVLDADMWFHADSLITACAGGVQILDWSSFRLDQLATVTDADGLLVSLESPEAQSVSGDMFFWADPQR
AVHPLLANEGIELAENGLLAVDDNFMTGIPDVYAIGSAVSVKHCGAAQLPVVAGEESVFSMARHVADVLSGEQPFSAGAM
IAPVTQAFPGGRLFKAGTGLAEALAAGIEAEFAMLKTGGGAAGQAPCAVKLVVDKSTRRVLGVQAVSGDPCGLSDGFASA
GALALSGGMTVEMLAALDLPGESGRLLRSAACIVDNKLRGKVFGISPDELIASRAAGAEFFTLDLRSQPEWKKGHIEDAC
NIPLPQLKERLQDEVPRFTPLVIVGRSSDDAWSVACYLAGLGAGHVYVLDGGMDMWPYETVSQG
>Mature_544_residues
MRRIVIVGEGAAAAKLAARTRRMTENAEVNLVLSSAGDAGKGVFGSYAKKNRISLEQMKTRDVGVLETDELDFDFEKREI
HVRSARGWLPMRFDQLVLEINTVPRVPRALRRCDNVVPWPVGDVAALDTILAEIRPSVAVVVGSSRQAVELVRLLASSDV
PVRWLRTAPAQSPVLDADMWFHADSLITACAGGVQILDWSSFRLDQLATVTDADGLLVSLESPEAQSVSGDMFFWADPQR
AVHPLLANEGIELAENGLLAVDDNFMTGIPDVYAIGSAVSVKHCGAAQLPVVAGEESVFSMARHVADVLSGEQPFSAGAM
IAPVTQAFPGGRLFKAGTGLAEALAAGIEAEFAMLKTGGGAAGQAPCAVKLVVDKSTRRVLGVQAVSGDPCGLSDGFASA
GALALSGGMTVEMLAALDLPGESGRLLRSAACIVDNKLRGKVFGISPDELIASRAAGAEFFTLDLRSQPEWKKGHIEDAC
NIPLPQLKERLQDEVPRFTPLVIVGRSSDDAWSVACYLAGLGAGHVYVLDGGMDMWPYETVSQG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57687; Mature: 57687

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIVIVGEGAAAAKLAARTRRMTENAEVNLVLSSAGDAGKGVFGSYAKKNRISLEQMKT
CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCHHHHHC
RDVGVLETDELDFDFEKREIHVRSARGWLPMRFDQLVLEINTVPRVPRALRRCDNVVPWP
CCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
VGDVAALDTILAEIRPSVAVVVGSSRQAVELVRLLASSDVPVRWLRTAPAQSPVLDADMW
CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH
FHADSLITACAGGVQILDWSSFRLDQLATVTDADGLLVSLESPEAQSVSGDMFFWADPQR
CCHHHHHHHHCCCEEEEECCCCCHHHHEEEECCCCEEEEECCCCCCCCCCCEEEEECCHH
AVHPLLANEGIELAENGLLAVDDNFMTGIPDVYAIGSAVSVKHCGAAQLPVVAGEESVFS
HHHHHHHCCCCHHHCCCEEEECCCCCCCCCHHHHCCCCCEECCCCCCCCCEEECCHHHHH
MARHVADVLSGEQPFSAGAMIAPVTQAFPGGRLFKAGTGLAEALAAGIEAEFAMLKTGGG
HHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCEEECCCCHHHHHHHCCCCEEEEEECCCC
AAGQAPCAVKLVVDKSTRRVLGVQAVSGDPCGLSDGFASAGALALSGGMTVEMLAALDLP
CCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCC
GESGRLLRSAACIVDNKLRGKVFGISPDELIASRAAGAEFFTLDLRSQPEWKKGHIEDAC
CCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
NIPLPQLKERLQDEVPRFTPLVIVGRSSDDAWSVACYLAGLGAGHVYVLDGGMDMWPYET
CCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHEEEEEEECCCCCEEEEEECCCCCCCCHH
VSQG
CCCC
>Mature Secondary Structure
MRRIVIVGEGAAAAKLAARTRRMTENAEVNLVLSSAGDAGKGVFGSYAKKNRISLEQMKT
CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCHHHHHC
RDVGVLETDELDFDFEKREIHVRSARGWLPMRFDQLVLEINTVPRVPRALRRCDNVVPWP
CCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
VGDVAALDTILAEIRPSVAVVVGSSRQAVELVRLLASSDVPVRWLRTAPAQSPVLDADMW
CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH
FHADSLITACAGGVQILDWSSFRLDQLATVTDADGLLVSLESPEAQSVSGDMFFWADPQR
CCHHHHHHHHCCCEEEEECCCCCHHHHEEEECCCCEEEEECCCCCCCCCCCEEEEECCHH
AVHPLLANEGIELAENGLLAVDDNFMTGIPDVYAIGSAVSVKHCGAAQLPVVAGEESVFS
HHHHHHHCCCCHHHCCCEEEECCCCCCCCCHHHHCCCCCEECCCCCCCCCEEECCHHHHH
MARHVADVLSGEQPFSAGAMIAPVTQAFPGGRLFKAGTGLAEALAAGIEAEFAMLKTGGG
HHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCEEECCCCHHHHHHHCCCCEEEEEECCCC
AAGQAPCAVKLVVDKSTRRVLGVQAVSGDPCGLSDGFASAGALALSGGMTVEMLAALDLP
CCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCC
GESGRLLRSAACIVDNKLRGKVFGISPDELIASRAAGAEFFTLDLRSQPEWKKGHIEDAC
CCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
NIPLPQLKERLQDEVPRFTPLVIVGRSSDDAWSVACYLAGLGAGHVYVLDGGMDMWPYET
CCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHEEEEEEECCCCCEEEEEECCCCCCCCHH
VSQG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA