| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357221
Identifier: 78357221
GI number: 78357221
Start: 2218134
End: 2219081
Strand: Reverse
Name: 78357221
Synonym: Dde_2178
Alternate gene names: NA
Gene position: 2219081-2218134 (Counterclockwise)
Preceding gene: 78357222
Following gene: 78357219
Centisome position: 59.49
GC content: 60.23
Gene sequence:
>948_bases GTGAGAACATTGTTTTTGTTTTTCGGAAGGCTGATGCGTCATGCTCTGCCGCTTGTGCTTGCCGGCGCTTTTTGCCTTGG CACCGCAGCCGGTGTGCAGGCCCGGCAGGTGGATGTGCTTTGGAGTGCCGATGCCGGAGTGCGGGACGCGGCAGCGGAAG AAAACATGCCCGCCAGTGCTTCTGCCGCCCGCGAAAAGGCTTTTGAGCAGGCTGTCTGGCTGGAGGCGCTCTCCATGGCG GACGACGGATTGAGTGATGCCCGCAGAGAACTGCTGCGCGAGTTTATTGTGCCCCGGGCTATGGAGTATGTTCAGAGCTA CTCCGAGCTGGGCAGTGCTTCTTCTGATTCCGGTACAACGCTGAGTGTTGATGTGCTGGTAAACCGCAGAGCGCTGAAAG ACACATTGCGGGGGCTGGGATGTATGCGCGGCTCGGCGGAGCCTGTGGAGTACATGCTGACCATCGGCGGTGCTTCTGAT GTATGGGATGAGCTGGGACGTCTGCAGGCTTTGTACAACACAAGGGTGACCCAGAACGCTTCTGTGGCGGTTTTTCTGGA ACACAGAGGGGACATGTGGACCGGCAGACTGGATGCCGGCGGGCACAGCAGGGCGGCATCCGGAACCACGCTGGCAGATG CGTGGCATGGCATATGGGCGCAGTATTTTTCTTCGCTTGCCGCAGCCCAGGGCCCGCATGATGCGCTGGTGCTGCAGGTC AGCGGCTGGTTCACCCCCGACGGGGTGGAGTCGTTTGATAAAGAACTCAGTTCATGGGACCGCGATTTTGACGAAGCCGG TCTTGCACAGGTGAGTATGGAGACTGCCGGTATTTCAGCCCGCTGGGTGCTCCGCGGGGCTTCCAGAGGGGCTCTCGAAC GGCGTCTGGAGGCTGCGCTCGAAGGCAAAGGGCTCAGCTGGGTGCTGGAGCCTGACGGTTCACTATAA
Upstream 100 bases:
>100_bases TGCCGCTTGCCCGCCGCCCTGTTTTATGCTGGAATGACGGCGGACAAGCTCTATACTGACATTGAGGCCGCAGTGCCTGA TTTTTCATAAGAGGTTTATC
Downstream 100 bases:
>100_bases TAAAATCCCGGGGCCTGGGGCCTCGGGATTTTGTACATCGGTTCACCGCAGGGCGAAAGAGGTTACTCGTCCTTGTGTTT CTTCTCGGAAGAAGGGGTGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MRTLFLFFGRLMRHALPLVLAGAFCLGTAAGVQARQVDVLWSADAGVRDAAAEENMPASASAAREKAFEQAVWLEALSMA DDGLSDARRELLREFIVPRAMEYVQSYSELGSASSDSGTTLSVDVLVNRRALKDTLRGLGCMRGSAEPVEYMLTIGGASD VWDELGRLQALYNTRVTQNASVAVFLEHRGDMWTGRLDAGGHSRAASGTTLADAWHGIWAQYFSSLAAAQGPHDALVLQV SGWFTPDGVESFDKELSSWDRDFDEAGLAQVSMETAGISARWVLRGASRGALERRLEAALEGKGLSWVLEPDGSL
Sequences:
>Translated_315_residues MRTLFLFFGRLMRHALPLVLAGAFCLGTAAGVQARQVDVLWSADAGVRDAAAEENMPASASAAREKAFEQAVWLEALSMA DDGLSDARRELLREFIVPRAMEYVQSYSELGSASSDSGTTLSVDVLVNRRALKDTLRGLGCMRGSAEPVEYMLTIGGASD VWDELGRLQALYNTRVTQNASVAVFLEHRGDMWTGRLDAGGHSRAASGTTLADAWHGIWAQYFSSLAAAQGPHDALVLQV SGWFTPDGVESFDKELSSWDRDFDEAGLAQVSMETAGISARWVLRGASRGALERRLEAALEGKGLSWVLEPDGSL >Mature_315_residues MRTLFLFFGRLMRHALPLVLAGAFCLGTAAGVQARQVDVLWSADAGVRDAAAEENMPASASAAREKAFEQAVWLEALSMA DDGLSDARRELLREFIVPRAMEYVQSYSELGSASSDSGTTLSVDVLVNRRALKDTLRGLGCMRGSAEPVEYMLTIGGASD VWDELGRLQALYNTRVTQNASVAVFLEHRGDMWTGRLDAGGHSRAASGTTLADAWHGIWAQYFSSLAAAQGPHDALVLQV SGWFTPDGVESFDKELSSWDRDFDEAGLAQVSMETAGISARWVLRGASRGALERRLEAALEGKGLSWVLEPDGSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34019; Mature: 34019
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLFLFFGRLMRHALPLVLAGAFCLGTAAGVQARQVDVLWSADAGVRDAAAEENMPASA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCCCCCCH SAAREKAFEQAVWLEALSMADDGLSDARRELLREFIVPRAMEYVQSYSELGSASSDSGTT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LSVDVLVNRRALKDTLRGLGCMRGSAEPVEYMLTIGGASDVWDELGRLQALYNTRVTQNA EEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC SVAVFLEHRGDMWTGRLDAGGHSRAASGTTLADAWHGIWAQYFSSLAAAQGPHDALVLQV CEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE SGWFTPDGVESFDKELSSWDRDFDEAGLAQVSMETAGISARWVLRGASRGALERRLEAAL ECCCCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH EGKGLSWVLEPDGSL CCCCCEEEECCCCCC >Mature Secondary Structure MRTLFLFFGRLMRHALPLVLAGAFCLGTAAGVQARQVDVLWSADAGVRDAAAEENMPASA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCCCCCCH SAAREKAFEQAVWLEALSMADDGLSDARRELLREFIVPRAMEYVQSYSELGSASSDSGTT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LSVDVLVNRRALKDTLRGLGCMRGSAEPVEYMLTIGGASDVWDELGRLQALYNTRVTQNA EEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC SVAVFLEHRGDMWTGRLDAGGHSRAASGTTLADAWHGIWAQYFSSLAAAQGPHDALVLQV CEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE SGWFTPDGVESFDKELSSWDRDFDEAGLAQVSMETAGISARWVLRGASRGALERRLEAAL ECCCCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH EGKGLSWVLEPDGSL CCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA