Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356925

Identifier: 78356925

GI number: 78356925

Start: 1932757

End: 1933131

Strand: Reverse

Name: 78356925

Synonym: Dde_1882

Alternate gene names: NA

Gene position: 1933131-1932757 (Counterclockwise)

Preceding gene: 78356926

Following gene: 78356924

Centisome position: 51.82

GC content: 65.33

Gene sequence:

>375_bases
ATGGGTGATCTCAGCAAGAATTTCAACCGTTCGGAATTCGCCTGCAAGGGCAAGAACTGCTGCGGCCATTCGGCTGCGGT
CCATCCCGACCTGGTCGACGCCCTACAGGCGTTGCGCGACCGTGTCGGCAAACCGCTGTCCATCACCAGCGGCTTCCGCT
GCAACCGGCACAACAAGGCGGTGGGCGGCGCGGAGCAGAGTTTCCACACACTGGGCATGGCGGCCGACGTGAGCTGTCCC
GCTGGCGTTTCGCCTGAGGAGCTGGCGGTCGTCGCCGAGGAGATTCCGCTCTTCCGCGAGGGCGGCATCGGCGTCTATGC
CTCCTGGGTCCATCTCGACGTGCGCCAGTCGGGCAAGGCGAGGTGGCGGTCATGA

Upstream 100 bases:

>100_bases
AAACCCAACGACAAGGAGGCCCCGCCCACGCCGCAAAACGAGCCGCCAGCCATGGTGACCATCAATGCGGACACCAGCGC
GGTCACACAAGGAGGCGGCA

Downstream 100 bases:

>100_bases
GCGCCGAAGCCAAGACTCTGTTTTCCGGCACCGCGCTGGGTCTCTCCGGGCCGCTTCGGGTGGAGATTCTTGCCAATGGA
ATGACCGCGAGGCTGACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Muramoyl-Pentapeptide Carboxypeptidase

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MGDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKAVGGAEQSFHTLGMAADVSCP
AGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKARWRS

Sequences:

>Translated_124_residues
MGDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKAVGGAEQSFHTLGMAADVSCP
AGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKARWRS
>Mature_123_residues
GDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKAVGGAEQSFHTLGMAADVSCPA
GVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKARWRS

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13308; Mature: 13177

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKA
CCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEECCCCCC
VGGAEQSFHTLGMAADVSCPAGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKA
CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEEEEEEECCCCCCC
RWRS
CCCC
>Mature Secondary Structure 
GDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKA
CCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEECCCCCC
VGGAEQSFHTLGMAADVSCPAGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKA
CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEEEEEEECCCCCCC
RWRS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA