| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356868
Identifier: 78356868
GI number: 78356868
Start: 1874675
End: 1874959
Strand: Direct
Name: 78356868
Synonym: Dde_1825
Alternate gene names: NA
Gene position: 1874675-1874959 (Clockwise)
Preceding gene: 78356867
Following gene: 78356869
Centisome position: 50.26
GC content: 49.82
Gene sequence:
>285_bases ATGAGCGCCGAACACCACCATATTGTCAGTTTCAGGCAAAACACCATCATCTGGCTTGTCCTGCTCGTTTTCACTGCCAT CACGGTTGCCGCGTCCCGCTTTGATTTCGGATTCCTGAACATCGTCGTTGCCCTTGGCATAGCCACCTGCAAAGCAGGTC TGGTGACGCTTTATTTCATGCACCTGCGGTATGAGGGCAATCTTATCCGCCTGATGGTTTTCATTGCCTTTGCAATTCTT GCCATCGCCATAGGATTCACATTTTTTGACGTAGCCTACAGGTGA
Upstream 100 bases:
>100_bases ATTTCATCTTTCTCGAAAACAGCGGCCTGTACTGGCATCTTGTTGATCTGGTATGGATTTACCTTTTTCCGCTTTTTTAC CTCATTGTGTAGGAGAGATC
Downstream 100 bases:
>100_bases GGTGCCTATGTTTCCGCAATCACTCAGCCCTGTGCAACAGGTTGATCTGGCTTTCTATGTCATCTTCGGCATTTCAATAG CAATTCTGGTATGCATAACC
Product: Caa(3)-type oxidase subunit IV
Products: ferricytochrome c; H2O
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFMHLRYEGNLIRLMVFIAFAIL AIAIGFTFFDVAYR
Sequences:
>Translated_94_residues MSAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFMHLRYEGNLIRLMVFIAFAIL AIAIGFTFFDVAYR >Mature_93_residues SAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFMHLRYEGNLIRLMVFIAFAILA IAIGFTFFDVAYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 10614; Mature: 10483
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH HLRYEGNLIRLMVFIAFAILAIAIGFTFFDVAYR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH HLRYEGNLIRLMVFIAFAILAIAIGFTFFDVAYR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA