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The map label for this gene is cyf [H]

Identifier: 78356864

GI number: 78356864

Start: 1871116

End: 1871427

Strand: Direct

Name: cyf [H]

Synonym: Dde_1821

Alternate gene names: 78356864

Gene position: 1871116-1871427 (Clockwise)

Preceding gene: 78356862

Following gene: 78356865

Centisome position: 50.16

GC content: 53.21

Gene sequence:

>312_bases
ATGAAAAAACTGATCGCAATCATGAGCCTGTGCCTTGTTCTCGGAACCGGAGCAGCCATTGCCACGGCAGCTGAAGACGG
AGCCTCACTGTACAGAATGTGTGCAGGGTGCCACGGCGCCGACGGCAGCAAACTGGCCATGGGGGTCGGCGAACCAATCA
AGGGGCAGAGCGCCGAACAGCTGTATAAAAACATGAAAGGCTACCTCGACGGTTCTTTCGGCGGATCTAAAAAAAGTGTC
ATGATCAATATCATGAAGCGCCTCAACGACGAGCAGATCAAGACTCTGGCCGACCACATCGCAAAGTTCTAA

Upstream 100 bases:

>100_bases
TGCATGAAGACGTTGCGTTTATTATACATGCACTGTTAGTATTGTTTGCAATATGGACTGCATGTCCCATGTTCCAATAC
CCATAAATACGGAGGATGTA

Downstream 100 bases:

>100_bases
GCATCCGTCATCTTTCGGAGGGTCCCCATGAAGATGCCTGCCTTGCTGTCAATAGCAGCTGTTGTGGTCTTCTGCCTGCT
TGCCATTACCGGCATACCCG

Product: cytochrome c-553

Products: NA

Alternate protein names: Cytochrome c553; Low-potential cytochrome c [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKKLIAIMSLCLVLGTGAAIATAAEDGASLYRMCAGCHGADGSKLAMGVGEPIKGQSAEQLYKNMKGYLDGSFGGSKKSV
MINIMKRLNDEQIKTLADHIAKF

Sequences:

>Translated_103_residues
MKKLIAIMSLCLVLGTGAAIATAAEDGASLYRMCAGCHGADGSKLAMGVGEPIKGQSAEQLYKNMKGYLDGSFGGSKKSV
MINIMKRLNDEQIKTLADHIAKF
>Mature_103_residues
MKKLIAIMSLCLVLGTGAAIATAAEDGASLYRMCAGCHGADGSKLAMGVGEPIKGQSAEQLYKNMKGYLDGSFGGSKKSV
MINIMKRLNDEQIKTLADHIAKF

Specific function: Natural electron acceptor for a formate dehydrogenase [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10855; Mature: 10855

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIAIMSLCLVLGTGAAIATAAEDGASLYRMCAGCHGADGSKLAMGVGEPIKGQSAEQ
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHH
LYKNMKGYLDGSFGGSKKSVMINIMKRLNDEQIKTLADHIAKF
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLIAIMSLCLVLGTGAAIATAAEDGASLYRMCAGCHGADGSKLAMGVGEPIKGQSAEQ
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHH
LYKNMKGYLDGSFGGSKKSVMINIMKRLNDEQIKTLADHIAKF
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2542232; 8269917; 5038698; 1326323; 7844834; 8766830; 9490053; 9622485; 9654061 [H]