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The map label for this gene is secF

Identifier: 78356862

GI number: 78356862

Start: 1869872

End: 1870942

Strand: Direct

Name: secF

Synonym: Dde_1819

Alternate gene names: 78356862

Gene position: 1869872-1870942 (Clockwise)

Preceding gene: 78356861

Following gene: 78356864

Centisome position: 50.13

GC content: 56.21

Gene sequence:

>1071_bases
ATGGGATTGTCCATAATAAAGCCCGATATCAATATTGATTTTGTCGGTCTGCGCAAAATATCTCTGTGCCTTTCCGGAGT
GGTTCTCCTTGTCGGGCTGCTTTCGCTTTTCATCAAAGGCGGCCCGAGCTACGGAATTGACTTTGCCGGCGGGGTGGTGG
TGCAGGTGCAGTTTGACCGCTCCGTCGAGCCGGCCGCCATCAAGAGCAGTCTGGAAGACCTTAACCTTCCTGGACTGAGC
GTGCAGCGTTTCGGAGACAGCGCAGACAATGAATACCTCGTGCGCGTTTCGCAGGCGGGAGAAAATCCCGAAGATCTGCG
CAGTGACATTGCACAGGCTTTTACCGGAAAACTTCCGGGGGCCAGCTATGAAATCAAACGGCTGGAAATGGTAGGCCCGA
AAGTAGGGGCCGATCTGCGCTCGAAAGCGGTTGAAGCTCTTTACTTCGCCGTGCTGCTCATTGCCATTTACATCTCAGGC
CGTTTTGAACAACGCTGGTTCACCGCGGGTATCATGGCCGCGGCCCTTGCCACCGGCATGTATCTGCTGGGCCAGCTGGG
CATAAGCAAAGCAGGTCTGGTGTTTGCCGCCTTGCTGCTTACGCTTGCGCTCTGCTGGAAGCTGAAGCTCAACTTCGCAC
TGGGGGCGCTTGTGGCGCTCATACACGACGTAACCATTACGGTGGGGCTTTTTTCCTTGCTGGACAAGGAGTTTGACCTG
ACCATCGTGGCAGCGCTGCTGACCATTATCGGGTACTCGCTGAACGACACCATCATTGTCTACGACCGTATCCGCGAATA
CCGGCTGTCGCACCAGAACGAATCGCTCGGCTCGGTAATCAACCTGGCCATCAACCAGACGTTGAGCCGGACCATCCTGA
CATCCGGCACCACGCTGCTTGTCATCATCACGCTGTACTTCCTTGGAGGCGGCGTTATCCACGACTTCGCGCTGGCCATG
CTGATAGGTGTGGGCGTAGGTACCTATTCGTCCATCTTCGTCGCAAGCCCCATCCTGCTCATGCTCGGGGTGGATGTGCC
TGCAGAAGAACCTGCTCAGGATACCCCCTGA

Upstream 100 bases:

>100_bases
GGCCTCCATGTTCACCGCTATCTTTGTATCGCGCGTGCTTATGGATATCTGGAGCCTGAAACGCCAGGGCCGAAAGCTCA
GCATCTAAGGAGAGGAATTC

Downstream 100 bases:

>100_bases
GCCTTTCCGGTCATTCATTGACAAACAAGAGAGCGCCTGCGGGCGCTCTTTTTTTTGGGCATAACAAAATAAATGCATGA
AGACGTTGCGTTTATTATAC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MGLSIIKPDINIDFVGLRKISLCLSGVVLLVGLLSLFIKGGPSYGIDFAGGVVVQVQFDRSVEPAAIKSSLEDLNLPGLS
VQRFGDSADNEYLVRVSQAGENPEDLRSDIAQAFTGKLPGASYEIKRLEMVGPKVGADLRSKAVEALYFAVLLIAIYISG
RFEQRWFTAGIMAAALATGMYLLGQLGISKAGLVFAALLLTLALCWKLKLNFALGALVALIHDVTITVGLFSLLDKEFDL
TIVAALLTIIGYSLNDTIIVYDRIREYRLSHQNESLGSVINLAINQTLSRTILTSGTTLLVIITLYFLGGGVIHDFALAM
LIGVGVGTYSSIFVASPILLMLGVDVPAEEPAQDTP

Sequences:

>Translated_356_residues
MGLSIIKPDINIDFVGLRKISLCLSGVVLLVGLLSLFIKGGPSYGIDFAGGVVVQVQFDRSVEPAAIKSSLEDLNLPGLS
VQRFGDSADNEYLVRVSQAGENPEDLRSDIAQAFTGKLPGASYEIKRLEMVGPKVGADLRSKAVEALYFAVLLIAIYISG
RFEQRWFTAGIMAAALATGMYLLGQLGISKAGLVFAALLLTLALCWKLKLNFALGALVALIHDVTITVGLFSLLDKEFDL
TIVAALLTIIGYSLNDTIIVYDRIREYRLSHQNESLGSVINLAINQTLSRTILTSGTTLLVIITLYFLGGGVIHDFALAM
LIGVGVGTYSSIFVASPILLMLGVDVPAEEPAQDTP
>Mature_355_residues
GLSIIKPDINIDFVGLRKISLCLSGVVLLVGLLSLFIKGGPSYGIDFAGGVVVQVQFDRSVEPAAIKSSLEDLNLPGLSV
QRFGDSADNEYLVRVSQAGENPEDLRSDIAQAFTGKLPGASYEIKRLEMVGPKVGADLRSKAVEALYFAVLLIAIYISGR
FEQRWFTAGIMAAALATGMYLLGQLGISKAGLVFAALLLTLALCWKLKLNFALGALVALIHDVTITVGLFSLLDKEFDLT
IVAALLTIIGYSLNDTIIVYDRIREYRLSHQNESLGSVINLAINQTLSRTILTSGTTLLVIITLYFLGGGVIHDFALAML
IGVGVGTYSSIFVASPILLMLGVDVPAEEPAQDTP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=351, Percent_Identity=34.1880341880342, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 38083; Mature: 37952

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSIIKPDINIDFVGLRKISLCLSGVVLLVGLLSLFIKGGPSYGIDFAGGVVVQVQFDR
CCCCEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
SVEPAAIKSSLEDLNLPGLSVQRFGDSADNEYLVRVSQAGENPEDLRSDIAQAFTGKLPG
CCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC
ASYEIKRLEMVGPKVGADLRSKAVEALYFAVLLIAIYISGRFEQRWFTAGIMAAALATGM
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YLLGQLGISKAGLVFAALLLTLALCWKLKLNFALGALVALIHDVTITVGLFSLLDKEFDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TIVAALLTIIGYSLNDTIIVYDRIREYRLSHQNESLGSVINLAINQTLSRTILTSGTTLL
HHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
VIITLYFLGGGVIHDFALAMLIGVGVGTYSSIFVASPILLMLGVDVPAEEPAQDTP
HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLSIIKPDINIDFVGLRKISLCLSGVVLLVGLLSLFIKGGPSYGIDFAGGVVVQVQFDR
CCCEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
SVEPAAIKSSLEDLNLPGLSVQRFGDSADNEYLVRVSQAGENPEDLRSDIAQAFTGKLPG
CCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC
ASYEIKRLEMVGPKVGADLRSKAVEALYFAVLLIAIYISGRFEQRWFTAGIMAAALATGM
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YLLGQLGISKAGLVFAALLLTLALCWKLKLNFALGALVALIHDVTITVGLFSLLDKEFDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TIVAALLTIIGYSLNDTIIVYDRIREYRLSHQNESLGSVINLAINQTLSRTILTSGTTLL
HHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
VIITLYFLGGGVIHDFALAMLIGVGVGTYSSIFVASPILLMLGVDVPAEEPAQDTP
HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]