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The map label for this gene is 78356865

Identifier: 78356865

GI number: 78356865

Start: 1871455

End: 1872396

Strand: Direct

Name: 78356865

Synonym: Dde_1822

Alternate gene names: NA

Gene position: 1871455-1872396 (Clockwise)

Preceding gene: 78356864

Following gene: 78356866

Centisome position: 50.17

GC content: 53.08

Gene sequence:

>942_bases
ATGAAGATGCCTGCCTTGCTGTCAATAGCAGCTGTTGTGGTCTTCTGCCTGCTTGCCATTACCGGCATACCCGCTGCAGC
CGAAGAGCATACAGCTCATACCATGCAGAATCCGGAAGCCCGGCCGGCAGCAGTGCCACATGCCGTGACAGGGCACGGGC
ACGAAGATACCGGCCACGAAGCCCATACGGCAGCGGAGGGGATGCCTCAGAAAGAGGACGCCCATGTTCATCCATCCGCT
TCTGCCGCCCCCCAGGCGGCAGAAGTGGATGAAAAGCTCGGGCAGTATGTGCCCGAAGGACTTAGCTTCACAGACTCGCA
GGGGCGCGTGGTCGATATTCGATCCGTTATGGACAAACCGACCATTGTCGCCCCTGTTTATTATTCCTGCCCCACGGTAT
GCAATATTCTGATGAGCTCCATAGCCAGCGTACTGCCCGGTGTCACCCTTACCCCCGGCAAAGATTATAAGGTGCTCAGC
GTCAGTTTTGACGAACTGGATACCCCAGAGCTGGCAGCCCGCAAAAAAGCCAATTACATGCAGGCCCTTGATAACGCTTT
TCCACCCGAAGCATGGCTGTTTCTCACCGGTGACAAACATAACATCGATGCATTTATGGACAGCATCGGTTTTCGCTTTC
AAAGACAGGGCAGAGACTTCATCCACCCTGTAGTTCTTGTGGCGGTGTCACCTGAGGGGAAAATAGTCCGCTACCTGTAT
GGCAGCGGTTTCCTGCCTTTTGACATCACCATGGCTGCAACGGAAGCGGCAGAAGGAAAAGTGGGACTGTCTGTAAAACG
AGTGCTTGCATACTGTTTTACATACGACCCGGAAGGAAAACGCTATGTATTCGACTTTATGCGTATTGCAGGAATTGTGG
TTCTTTCCGGCATAGCTTTGTTCCTCTTTCTTCTTTTGCGCGGCGGGAAAAAAAGAAACTGA

Upstream 100 bases:

>100_bases
CATGATCAATATCATGAAGCGCCTCAACGACGAGCAGATCAAGACTCTGGCCGACCACATCGCAAAGTTCTAAGCATCCG
TCATCTTTCGGAGGGTCCCC

Downstream 100 bases:

>100_bases
CTTAGCGGCACAACAATAAGCTTAACGTCCCAAGTGAGAGGTGGTTATGGCTACGGCTGACGCGGTTCAGACTTCCCGGG
GCTTCTGGGGACCGTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: SCO1/SenC/PrrC Family Protein; SCO1/SenC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; Respiratory System Biogenesis Protein

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKMPALLSIAAVVVFCLLAITGIPAAAEEHTAHTMQNPEARPAAVPHAVTGHGHEDTGHEAHTAAEGMPQKEDAHVHPSA
SAAPQAAEVDEKLGQYVPEGLSFTDSQGRVVDIRSVMDKPTIVAPVYYSCPTVCNILMSSIASVLPGVTLTPGKDYKVLS
VSFDELDTPELAARKKANYMQALDNAFPPEAWLFLTGDKHNIDAFMDSIGFRFQRQGRDFIHPVVLVAVSPEGKIVRYLY
GSGFLPFDITMAATEAAEGKVGLSVKRVLAYCFTYDPEGKRYVFDFMRIAGIVVLSGIALFLFLLLRGGKKRN

Sequences:

>Translated_313_residues
MKMPALLSIAAVVVFCLLAITGIPAAAEEHTAHTMQNPEARPAAVPHAVTGHGHEDTGHEAHTAAEGMPQKEDAHVHPSA
SAAPQAAEVDEKLGQYVPEGLSFTDSQGRVVDIRSVMDKPTIVAPVYYSCPTVCNILMSSIASVLPGVTLTPGKDYKVLS
VSFDELDTPELAARKKANYMQALDNAFPPEAWLFLTGDKHNIDAFMDSIGFRFQRQGRDFIHPVVLVAVSPEGKIVRYLY
GSGFLPFDITMAATEAAEGKVGLSVKRVLAYCFTYDPEGKRYVFDFMRIAGIVVLSGIALFLFLLLRGGKKRN
>Mature_313_residues
MKMPALLSIAAVVVFCLLAITGIPAAAEEHTAHTMQNPEARPAAVPHAVTGHGHEDTGHEAHTAAEGMPQKEDAHVHPSA
SAAPQAAEVDEKLGQYVPEGLSFTDSQGRVVDIRSVMDKPTIVAPVYYSCPTVCNILMSSIASVLPGVTLTPGKDYKVLS
VSFDELDTPELAARKKANYMQALDNAFPPEAWLFLTGDKHNIDAFMDSIGFRFQRQGRDFIHPVVLVAVSPEGKIVRYLY
GSGFLPFDITMAATEAAEGKVGLSVKRVLAYCFTYDPEGKRYVFDFMRIAGIVVLSGIALFLFLLLRGGKKRN

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33903; Mature: 33903

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPALLSIAAVVVFCLLAITGIPAAAEEHTAHTMQNPEARPAAVPHAVTGHGHEDTGHE
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
AHTAAEGMPQKEDAHVHPSASAAPQAAEVDEKLGQYVPEGLSFTDSQGRVVDIRSVMDKP
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCEEEHHHHHCCC
TIVAPVYYSCPTVCNILMSSIASVLPGVTLTPGKDYKVLSVSFDELDTPELAARKKANYM
CEEEEHHHCHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHH
QALDNAFPPEAWLFLTGDKHNIDAFMDSIGFRFQRQGRDFIHPVVLVAVSPEGKIVRYLY
HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCCEEEEEE
GSGFLPFDITMAATEAAEGKVGLSVKRVLAYCFTYDPEGKRYVFDFMRIAGIVVLSGIAL
CCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FLFLLLRGGKKRN
HHHHHHCCCCCCC
>Mature Secondary Structure
MKMPALLSIAAVVVFCLLAITGIPAAAEEHTAHTMQNPEARPAAVPHAVTGHGHEDTGHE
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
AHTAAEGMPQKEDAHVHPSASAAPQAAEVDEKLGQYVPEGLSFTDSQGRVVDIRSVMDKP
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCEEEHHHHHCCC
TIVAPVYYSCPTVCNILMSSIASVLPGVTLTPGKDYKVLSVSFDELDTPELAARKKANYM
CEEEEHHHCHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHH
QALDNAFPPEAWLFLTGDKHNIDAFMDSIGFRFQRQGRDFIHPVVLVAVSPEGKIVRYLY
HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCCEEEEEE
GSGFLPFDITMAATEAAEGKVGLSVKRVLAYCFTYDPEGKRYVFDFMRIAGIVVLSGIAL
CCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FLFLLLRGGKKRN
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA