Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356828

Identifier: 78356828

GI number: 78356828

Start: 1836496

End: 1838076

Strand: Direct

Name: 78356828

Synonym: Dde_1785

Alternate gene names: NA

Gene position: 1836496-1838076 (Clockwise)

Preceding gene: 78356827

Following gene: 78356829

Centisome position: 49.23

GC content: 56.74

Gene sequence:

>1581_bases
ATGGGCATCTGTCTGCGTTTTCTGCTGTCCGGAGTTATTCTGCTTTTTGCCTGCTCCCTTTTGCCGCTCAAAGCTTCGGC
AGCAGCCGCTCAGGGAAGTTTTGATCCTGCTCCGCTGCGCGCACAGGCCGTCAATCTGTATCAGCAGGGCAAAATTCTTG
AAAGTCTTGAGCTATGGCACGCCATCTACCGTCTGGGGGACTCGGCGGCCGTCAGGTCGGAAGCGCTTGTCATGCTGGGC
GATATCAACGCCATGTTTCTGGACCGCAAAGACAGAGCCATCGATCTTTACGAAAAAGGCATCGCCCTTGGCGGTCTGCC
TCATGTCATTGCAAGGGCTTGGTACAATCTGGCCATGCTCCGGTACGACAGGGGAGAGTACACCGCTGCCCGTCTGGCCT
TTGAAGGCTATCTGAAGCGTTTTCCCAACGGTCCCAAGGCCGGAGGAAGCCGCCACATGCTCACCCGCCTGCAAAAGCAT
TCCTTTGCCGGTAAAGCCGATGTTCCTCCTGCGGAAATCACCCCCCGCCCCATACCGCGCAGAGAGCCCAATATCAGGGT
TGCCCTGAAGCATGCCTCTGAAATCATAGTCACTCCTCCTTCCGGCACGGTGGCCGGTTATGAAGGCAGAAGAGCCAGAG
TCATGGCCGGAAAGCTGCGCATAACAGTACAGGGAGACGATATATGCCTCAACGGCCGTCCCATGGGGGCTTCCGTCAGC
CTGCTGGCACGCGGCGGCACCTTTGCCATGGGCGATGCCCGTTATGCCGGCAGCATGAGCTTTCATGTGCGCGAAGGAAA
GGTGCTGGCAGTGAACACATTGCCGCTGGAGCGGTACCTGGAAGGCGTTGTTCCGTGCGAAATGCCTGACTCTTTCAGGC
CGCAGGCACTCCGTGCTCAGGCAGTGGCAGCGCGAACGCATGCCCTGTACATGCTCTTGCGCAGCAGCGAACGCCCATAT
GACGTATGGTCAACAACTGCATCACAGGTGTACGGAGGCGTCATTTCCGGCGGGCGGCAGGCTGCGGAAGCTGTCAAAGC
CACAAGAGGACGCATCCTTGTATATAACGGGGCAATCGCGCTGGCATTTTATCATTCTCACAGCGGCGGTGTGCTGGAAG
ATGATTCTGCCGTCTGGGATGTTGACATGCCGTACTATAGAGTGCAGGCAGACCCTGTAAGCAACAGCATAAAAGATATG
CAGTGGAGCTGCAGCATCCCTCTGAGTGAATTGGCAATGCTGCTGCGCAGCAGAGGGTACCCCGTAAGGCAGGTCAGCGG
TGTGGCTGTATCGCAGCGTTCTGCTTCCGGCAGGGTGCTCAGGGTGCGTATGGCCACAGACGGTGGCAATATTGAGATGA
ATTCCAATCCGTTCAGATTGCTGGTGGGTGCCACAAAGATGAAAAGCACACTATGCAGTATCGGCATAAGCGGTAAGACA
ATTCTTTTCAGGGGAAGAGGGTACGGACACGGAGTGGGGATGAGCCAGTGGGGTGCGGAAGGCATGGCCCGGAAAGGGGC
CGCTTATGAAGCAATTCTCAGGCAATACTATCCGCATACCACCGTGAGAGCTTTGTACTGA

Upstream 100 bases:

>100_bases
TTACCTGGTTCCGCAGAGAACCGAATCTGCACTGGCTGGACGGTACGGATATGGCGGCCATGGAACGGCTGGTACACTCT
GTGGCAGGCAGCACCGGCTG

Downstream 100 bases:

>100_bases
TGACGCAGCTTCGGCACGACAGGTGAAAATAATGAAAAAAATGGCATTGCCGCTGCTTTGCGCAACGCTGCTTTGCGCAT
GCTCCCCCGGCGAGGCAGTA

Product: sporulation protein and related proteins-like

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MGICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWHAIYRLGDSAAVRSEALVMLG
DINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAMLRYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKH
SFAGKADVPPAEITPRPIPRREPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS
LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQAVAARTHALYMLLRSSERPY
DVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIALAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDM
QWSCSIPLSELAMLLRSRGYPVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT
ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY

Sequences:

>Translated_526_residues
MGICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWHAIYRLGDSAAVRSEALVMLG
DINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAMLRYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKH
SFAGKADVPPAEITPRPIPRREPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS
LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQAVAARTHALYMLLRSSERPY
DVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIALAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDM
QWSCSIPLSELAMLLRSRGYPVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT
ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY
>Mature_525_residues
GICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWHAIYRLGDSAAVRSEALVMLGD
INAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAMLRYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKHS
FAGKADVPPAEITPRPIPRREPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVSL
LARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQAVAARTHALYMLLRSSERPYD
VWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIALAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDMQ
WSCSIPLSELAMLLRSRGYPVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKTI
LFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 57282; Mature: 57151

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWH
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
AIYRLGDSAAVRSEALVMLGDINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAML
HHHHCCCCHHHCCCEEEEEECCCEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHEEEE
RYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKHSFAGKADVPPAEITPRPIPR
EECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
REPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS
CCCCEEEEEECCCEEEEECCCCCEECCCCCEEEEEEEEEEEEEECCEEEECCCCCCCCEE
LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQ
EEECCCEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHH
AVAARTHALYMLLRSSERPYDVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIA
HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECEEE
LAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDMQWSCSIPLSELAMLLRSRGY
EEEEECCCCCEEECCCCEEECCCCEEEEECCCCCCCHHCCEEECCCCHHHHHHHHHHCCC
PVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT
CCHHCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEECHHHHHHHHHCCCCCCE
ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY
EEEECCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
GICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWH
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
AIYRLGDSAAVRSEALVMLGDINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAML
HHHHCCCCHHHCCCEEEEEECCCEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHEEEE
RYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKHSFAGKADVPPAEITPRPIPR
EECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
REPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS
CCCCEEEEEECCCEEEEECCCCCEECCCCCEEEEEEEEEEEEEECCEEEECCCCCCCCEE
LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQ
EEECCCEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHH
AVAARTHALYMLLRSSERPYDVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIA
HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECEEE
LAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDMQWSCSIPLSELAMLLRSRGY
EEEEECCCCCEEECCCCEEECCCCEEEEECCCCCCCHHCCEEECCCCHHHHHHHHHHCCC
PVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT
CCHHCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEECHHHHHHHHHCCCCCCE
ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY
EEEECCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA