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The map label for this gene is 78356665

Identifier: 78356665

GI number: 78356665

Start: 1671375

End: 1672487

Strand: Direct

Name: 78356665

Synonym: Dde_1622

Alternate gene names: NA

Gene position: 1671375-1672487 (Clockwise)

Preceding gene: 78356660

Following gene: 78356666

Centisome position: 44.81

GC content: 55.62

Gene sequence:

>1113_bases
ATGCGCATGATTTCGGTTGTCACGGCCCTGTTGGTGGTTCTGTTCGGTTTTTCAGGTGCCCGGGCTGCGCTGTCCCTGCC
GGCTGTGCACGATGCTGCAGGAAAGGCTCTTGCCGTACCGGTTCCCGTGCAGCGGGTTATCTGTTCGGGCTCGGGTTGTC
TGCGCTTGCTGACATACCTTCAGGCTCAGCATATGGCCGTGGCGGTGGACGATATCGAAGTCCGCAGAGACCGTTTTGAC
GCCCGGCCATACGCTCTTGCCAACCCTTCATTTAAAAATCTTCCCGTATTCGGGCAGTTCCGCGGATACGACAACCCGGA
ACGCATTCTTATGCTTGCGCCTCAGCCGCAGGTTGTTTTTAAAACCTACACAAGCTCCATGGGGTACGATCCCCTTGAGC
TGCAGCAAAAAACCGGCATTCCCGTGGTGGTGCTCAATTATGGCGATCTTGGAGCCGGACGCCAGCATCTGTATGACAGC
CTGCGCATGATGGGGCATGTGGTGGGCAAGACCGGCCGTGCCGAAGAAGTAATCACTTTTTTTGAAAACGCCATTGCCGA
TCTGCAACGGCGGACCGCCGGCATTGCGGAAAATATGCGGCCGTCTGTTTTTGTGGGGGGGATAGCTTTCAAGGGGCCGC
ACGGGTTTCAGTCCACCGAGCCTGCTTACCCGCCTTTCAGTTTTGTAAATGCACGCAACCTTGCCGGGCAGGATGCCGTG
GGCAGCAGGCTGCAGCATTCTGACGTTGCCCGTGAAAAAATTGTCCAATGGAATCCCGACTACCTCTTTGTCGATCTGTC
TACTCTCCGGCTGGCGGACAAAGCCAACGGTATAGAAGAGCTTCGTTCCGACCCTGCATATGCGACGCTGAGTGCGGTGC
GGCAGGGGCGTGTGTTCGGCCTGCTGCCGTACAACTGGTACACGCAGAATTACGGTTCCATACTTGCCAATGCCTACTAT
ATCGGCTCCGTGCTGTATCCCGAACGTTTTGCCGACGTGGATCCCGCAGCAAAAGCTGATGAGATTTATACGTTTCTTGT
GGGTAGTCCCGTTTTTGACCAGTTGAACAGATCCTTTGATGGGCTTGCATACAGAGCGGTTCCGGTGAACTGA

Upstream 100 bases:

>100_bases
TTCTTTGTGTAAGTGATTGTTGACCTTGTGCCACCGGCAGGCTAGATGTAACAAAAAAGGTAAATTTGTAGCACAATAAG
CGGATGCCGGAGGAGACTGT

Downstream 100 bases:

>100_bases
CATGCATTTTCATGACGGAAAGGTTCCCGAAGAGTACCGCCGGTATATATGGGCCAAGGTTGTGTTTCTGTGTGGTGTTT
CTGCAGCGCTGCTGGCAGCG

Product: iron transport periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MRMISVVTALLVVLFGFSGARAALSLPAVHDAAGKALAVPVPVQRVICSGSGCLRLLTYLQAQHMAVAVDDIEVRRDRFD
ARPYALANPSFKNLPVFGQFRGYDNPERILMLAPQPQVVFKTYTSSMGYDPLELQQKTGIPVVVLNYGDLGAGRQHLYDS
LRMMGHVVGKTGRAEEVITFFENAIADLQRRTAGIAENMRPSVFVGGIAFKGPHGFQSTEPAYPPFSFVNARNLAGQDAV
GSRLQHSDVAREKIVQWNPDYLFVDLSTLRLADKANGIEELRSDPAYATLSAVRQGRVFGLLPYNWYTQNYGSILANAYY
IGSVLYPERFADVDPAAKADEIYTFLVGSPVFDQLNRSFDGLAYRAVPVN

Sequences:

>Translated_370_residues
MRMISVVTALLVVLFGFSGARAALSLPAVHDAAGKALAVPVPVQRVICSGSGCLRLLTYLQAQHMAVAVDDIEVRRDRFD
ARPYALANPSFKNLPVFGQFRGYDNPERILMLAPQPQVVFKTYTSSMGYDPLELQQKTGIPVVVLNYGDLGAGRQHLYDS
LRMMGHVVGKTGRAEEVITFFENAIADLQRRTAGIAENMRPSVFVGGIAFKGPHGFQSTEPAYPPFSFVNARNLAGQDAV
GSRLQHSDVAREKIVQWNPDYLFVDLSTLRLADKANGIEELRSDPAYATLSAVRQGRVFGLLPYNWYTQNYGSILANAYY
IGSVLYPERFADVDPAAKADEIYTFLVGSPVFDQLNRSFDGLAYRAVPVN
>Mature_370_residues
MRMISVVTALLVVLFGFSGARAALSLPAVHDAAGKALAVPVPVQRVICSGSGCLRLLTYLQAQHMAVAVDDIEVRRDRFD
ARPYALANPSFKNLPVFGQFRGYDNPERILMLAPQPQVVFKTYTSSMGYDPLELQQKTGIPVVVLNYGDLGAGRQHLYDS
LRMMGHVVGKTGRAEEVITFFENAIADLQRRTAGIAENMRPSVFVGGIAFKGPHGFQSTEPAYPPFSFVNARNLAGQDAV
GSRLQHSDVAREKIVQWNPDYLFVDLSTLRLADKANGIEELRSDPAYATLSAVRQGRVFGLLPYNWYTQNYGSILANAYY
IGSVLYPERFADVDPAAKADEIYTFLVGSPVFDQLNRSFDGLAYRAVPVN

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 40722; Mature: 40722

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMISVVTALLVVLFGFSGARAALSLPAVHDAAGKALAVPVPVQRVICSGSGCLRLLTYL
CHHHHHHHHHHHHHHCCCCCHHEEECCCHHHCCCCEEECCCCHHHHHCCCCCHHHHHHHH
QAQHMAVAVDDIEVRRDRFDARPYALANPSFKNLPVFGQFRGYDNPERILMLAPQPQVVF
HHHHEEEEEHHHHHHHHHCCCCCEEECCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEH
KTYTSSMGYDPLELQQKTGIPVVVLNYGDLGAGRQHLYDSLRMMGHVVGKTGRAEEVITF
EEHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
FENAIADLQRRTAGIAENMRPSVFVGGIAFKGPHGFQSTEPAYPPFSFVNARNLAGQDAV
HHHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHH
GSRLQHSDVAREKIVQWNPDYLFVDLSTLRLADKANGIEELRSDPAYATLSAVRQGRVFG
HHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCEEE
LLPYNWYTQNYGSILANAYYIGSVLYPERFADVDPAAKADEIYTFLVGSPVFDQLNRSFD
EECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHEEEEEECCHHHHHHCCCCC
GLAYRAVPVN
CEEEEEEECC
>Mature Secondary Structure
MRMISVVTALLVVLFGFSGARAALSLPAVHDAAGKALAVPVPVQRVICSGSGCLRLLTYL
CHHHHHHHHHHHHHHCCCCCHHEEECCCHHHCCCCEEECCCCHHHHHCCCCCHHHHHHHH
QAQHMAVAVDDIEVRRDRFDARPYALANPSFKNLPVFGQFRGYDNPERILMLAPQPQVVF
HHHHEEEEEHHHHHHHHHCCCCCEEECCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEH
KTYTSSMGYDPLELQQKTGIPVVVLNYGDLGAGRQHLYDSLRMMGHVVGKTGRAEEVITF
EEHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
FENAIADLQRRTAGIAENMRPSVFVGGIAFKGPHGFQSTEPAYPPFSFVNARNLAGQDAV
HHHHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHH
GSRLQHSDVAREKIVQWNPDYLFVDLSTLRLADKANGIEELRSDPAYATLSAVRQGRVFG
HHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCEEE
LLPYNWYTQNYGSILANAYYIGSVLYPERFADVDPAAKADEIYTFLVGSPVFDQLNRSFD
EECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHEEEEEECCHHHHHHCCCCC
GLAYRAVPVN
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]