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The map label for this gene is fecD [C]

Identifier: 78356666

GI number: 78356666

Start: 1672489

End: 1673559

Strand: Direct

Name: fecD [C]

Synonym: Dde_1623

Alternate gene names: 78356666

Gene position: 1672489-1673559 (Clockwise)

Preceding gene: 78356665

Following gene: 78356667

Centisome position: 44.84

GC content: 60.22

Gene sequence:

>1071_bases
ATGCATTTTCATGACGGAAAGGTTCCCGAAGAGTACCGCCGGTATATATGGGCCAAGGTTGTGTTTCTGTGTGGTGTTTC
TGCAGCGCTGCTGGCAGCGCTGGTTGTCTCCGTCAGCTCAGGGGCGGCGGATATCCCGCTGGGTTCTGTTGTCCGCAGCC
TTGCCGGACTGGGAGCCGATGCCCGCACCGAGGCCATAATCTGGAACATCCGCCTGCCGCAGGCTCTTTCCGCCATTGTG
GCCGGAGCGGGGCTGGCTGTGGCAGGTGCGGCCATGCAGGCCATATTGCGCAACCCGCTCGGGTCACCGTTCACGCTGGG
TATTTCGCATGCGGCGGCCTTTGGCGCGGCTTTTTCGGTAATGGTGCTCGGCGGCGGGGCCATGACATCCACAGCCGCGG
GTGCCGTCAGTGTCACTTCGCCGCTGATGACGACAGCGGCGGCCTTTGCATGCAGCCTTTCCGCTGCGCTGGTCATTATC
GCTGTTTCCCGTCTGCGCGGGGCTTCTCCCGAAACCATGGTCTTGACCGGCGTTGCGTTGGGAGCTCTTTTTACCGCGGG
AACCATGTTTCTGCAGTTTTTCGCTGACGATGTGCAGCTTGCGGCCATCGTGTTCTGGACATTTGGCGATACGGCACGGG
CCACGTGGACAGAGCTGGCGGTTCTGGCCCTGACAACGGCGGCATGCAGTGTATATTTTTTATCCAACGTATGGAATTAC
AACGCCATAGATGCCGGAGACGAAACTGCCATGGGGCTGGGAGTACGCGTGGGCAGGGTGCGGCTGACAGGCATGCTTGT
GGCCAGTCTGCTGACGGCGGTCATCATAGCGTTTCTGGGAATCATCGGCTTTGTGGGGCTGGTGGTGCCGCATATGGTCA
GACGTGTCATAGGGGCCGATCACCGTTTTCTGTTGCCTGCATCCGTGGCGGGCGGCGCGCTGATTCTGCTGGTTTCCGAC
ACTGCGGCCCGGCTGATTCTGGCGCCGCATGTTCTTCCGGTATCGGTACTTACCTCATTCATGGGGGCACCGGTGTTTAT
CTGGCTGATTGTCAGGGGGCGTAAAGTCTAG

Upstream 100 bases:

>100_bases
GCTGATGAGATTTATACGTTTCTTGTGGGTAGTCCCGTTTTTGACCAGTTGAACAGATCCTTTGATGGGCTTGCATACAG
AGCGGTTCCGGTGAACTGAC

Downstream 100 bases:

>100_bases
GAGGCCGTAGTGCTGAATGTAAGTGATGTTTCGTTCGCCTATAACGGCAGGCACGTTCTGCGGGGCATTGCTTTCGGCGT
GCAGCCGGGGGAACTGGTGG

Product: iron(III) dicitrate transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MHFHDGKVPEEYRRYIWAKVVFLCGVSAALLAALVVSVSSGAADIPLGSVVRSLAGLGADARTEAIIWNIRLPQALSAIV
AGAGLAVAGAAMQAILRNPLGSPFTLGISHAAAFGAAFSVMVLGGGAMTSTAAGAVSVTSPLMTTAAAFACSLSAALVII
AVSRLRGASPETMVLTGVALGALFTAGTMFLQFFADDVQLAAIVFWTFGDTARATWTELAVLALTTAACSVYFLSNVWNY
NAIDAGDETAMGLGVRVGRVRLTGMLVASLLTAVIIAFLGIIGFVGLVVPHMVRRVIGADHRFLLPASVAGGALILLVSD
TAARLILAPHVLPVSVLTSFMGAPVFIWLIVRGRKV

Sequences:

>Translated_356_residues
MHFHDGKVPEEYRRYIWAKVVFLCGVSAALLAALVVSVSSGAADIPLGSVVRSLAGLGADARTEAIIWNIRLPQALSAIV
AGAGLAVAGAAMQAILRNPLGSPFTLGISHAAAFGAAFSVMVLGGGAMTSTAAGAVSVTSPLMTTAAAFACSLSAALVII
AVSRLRGASPETMVLTGVALGALFTAGTMFLQFFADDVQLAAIVFWTFGDTARATWTELAVLALTTAACSVYFLSNVWNY
NAIDAGDETAMGLGVRVGRVRLTGMLVASLLTAVIIAFLGIIGFVGLVVPHMVRRVIGADHRFLLPASVAGGALILLVSD
TAARLILAPHVLPVSVLTSFMGAPVFIWLIVRGRKV
>Mature_356_residues
MHFHDGKVPEEYRRYIWAKVVFLCGVSAALLAALVVSVSSGAADIPLGSVVRSLAGLGADARTEAIIWNIRLPQALSAIV
AGAGLAVAGAAMQAILRNPLGSPFTLGISHAAAFGAAFSVMVLGGGAMTSTAAGAVSVTSPLMTTAAAFACSLSAALVII
AVSRLRGASPETMVLTGVALGALFTAGTMFLQFFADDVQLAAIVFWTFGDTARATWTELAVLALTTAACSVYFLSNVWNY
NAIDAGDETAMGLGVRVGRVRLTGMLVASLLTAVIIAFLGIIGFVGLVVPHMVRRVIGADHRFLLPASVAGGALILLVSD
TAARLILAPHVLPVSVLTSFMGAPVFIWLIVRGRKV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=340, Percent_Identity=34.1176470588235, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1788004, Length=295, Percent_Identity=34.2372881355932, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790741, Length=290, Percent_Identity=31.3793103448276, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786805, Length=319, Percent_Identity=33.5423197492163, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1786347, Length=295, Percent_Identity=30.5084745762712, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786804, Length=337, Percent_Identity=31.1572700296736, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36634; Mature: 36634

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFHDGKVPEEYRRYIWAKVVFLCGVSAALLAALVVSVSSGAADIPLGSVVRSLAGLGAD
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
ARTEAIIWNIRLPQALSAIVAGAGLAVAGAAMQAILRNPLGSPFTLGISHAAAFGAAFSV
CCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
MVLGGGAMTSTAAGAVSVTSPLMTTAAAFACSLSAALVIIAVSRLRGASPETMVLTGVAL
EEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
GALFTAGTMFLQFFADDVQLAAIVFWTFGDTARATWTELAVLALTTAACSVYFLSNVWNY
HHHHHHHHHHHHHHHCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAIDAGDETAMGLGVRVGRVRLTGMLVASLLTAVIIAFLGIIGFVGLVVPHMVRRVIGAD
CCCCCCCCCHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HRFLLPASVAGGALILLVSDTAARLILAPHVLPVSVLTSFMGAPVFIWLIVRGRKV
CCEEEECCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHEEHHEECCCCC
>Mature Secondary Structure
MHFHDGKVPEEYRRYIWAKVVFLCGVSAALLAALVVSVSSGAADIPLGSVVRSLAGLGAD
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
ARTEAIIWNIRLPQALSAIVAGAGLAVAGAAMQAILRNPLGSPFTLGISHAAAFGAAFSV
CCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
MVLGGGAMTSTAAGAVSVTSPLMTTAAAFACSLSAALVIIAVSRLRGASPETMVLTGVAL
EEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
GALFTAGTMFLQFFADDVQLAAIVFWTFGDTARATWTELAVLALTTAACSVYFLSNVWNY
HHHHHHHHHHHHHHHCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAIDAGDETAMGLGVRVGRVRLTGMLVASLLTAVIIAFLGIIGFVGLVVPHMVRRVIGAD
CCCCCCCCCHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HRFLLPASVAGGALILLVSDTAARLILAPHVLPVSVLTSFMGAPVFIWLIVRGRKV
CCEEEECCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHEEHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]