Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356629

Identifier: 78356629

GI number: 78356629

Start: 1610776

End: 1611897

Strand: Reverse

Name: 78356629

Synonym: Dde_1586

Alternate gene names: NA

Gene position: 1611897-1610776 (Counterclockwise)

Preceding gene: 78356630

Following gene: 78356622

Centisome position: 43.21

GC content: 52.58

Gene sequence:

>1122_bases
ATGGTTTTTCCAAACCTTAAAATCGGCGACATCGTCGCCAGAGTTCCTATTATCCAGGGAGGGATGGGTGTAGGAATCTC
GCTTTCCGGTCTGGCAAGCGCCGTAGCCAACGAGGGCGGCATAGGCGTAATTGCCGGTGCCATGATTGGCATGAACGAAC
CGGACGTGGCTAAAAATCCGCTTGAGGCGAACATCCGCGCCTTGCGCAAAGAAATACGCAAAGCCAAAGAGATGACCAGA
GGCATCCTCGGCGTTAACATTATGGTTGCGCTGACCAATTTTGCCGATCTGGTAAAAACATCCATCGACGAAAAAATCGA
TGTGATTTTCTCCGGTGCCGGACTGCCGCTTGAACTGCCCAGATACCTTAAAGAAGCCAGTGAACAGGGCAAGGAAGAAG
TGCGCACCAAACTGGTGCCCATTGTATCCTCTGCACGCGCGGCTTCAATCATCTGCAAAAAATGGCTGAACCGATTTGAC
TACCTGCCCGATGCCTTTGTGGTGGAAGGTCCCAAAGCAGGCGGACATCTGGGTTTTAAGCCCGAAGAGCTTGATGACCC
CGAGTTTGCGCTTGAAAAAGTCATTCCGCAGGTCATTGAAGCTGTAAAACCCTTTGAAGCACAGCGTAACAGACGTATTC
CGGTGATTGCCGCAGGCGGTGTGTACAGCGGCGACGACATCCGCAGCTACATCGATATGGGCGCAGCCGGTGTACAGATG
GGCACCCGTTTTGTGGCCACGCATGAATGCGACGCCGACGACCGCTTTAAGCAGGCGTATGTCGATGCAAAACAGGAAGA
TGTGGTTGTGATAAAAAGCCCTGTGGGCATGCCCGGCAGAGCCATACGCAGCCAGTTTGTAAAAGATGTGGATGAAGGCA
GACGCCAGCCCGTCAAATGCGCCTTCCACTGCATACATTCCTGCAAAGTGGAAAAAAGCCCATACTGCATAGCTGCCGCA
CTGTTAAACGCCAAAAAAGGCAACCTCAACAAAGGGTTCGCTTTTTCGGGCACCAATGTTCATCGTGTGGACAAAATACA
GTCGGTAAAAGAGCTTGTGGACTCGCTCAAAGAAGAGTTCGAGGCCTCACGGCTGTCGCACCCCCTTCCCCGGACAAGCT
GA

Upstream 100 bases:

>100_bases
GATAGGTGCGTCCACCGGACGCCCTGCCCTTCCGCTGTCGTTCCCGACGGACCGGCAGCATCATCATAAGGGGCTGTTCT
GCCCCACGGAGGACTGAATC

Downstream 100 bases:

>100_bases
TACAAAGCGCTCCCGAAAGGGGGCGCTTTTTTTTGCAGCCGCCGGCCCGCAGCGTAAAATTCCCCGGCAAAACAGCAGTA
GACTGGTCAGCCCCCCCGCT

Product: 2-nitropropane dioxygenase family oxidoreductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNPLEANIRALRKEIRKAKEMTR
GILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELPRYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFD
YLPDAFVVEGPKAGGHLGFKPEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM
GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKCAFHCIHSCKVEKSPYCIAAA
LLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEFEASRLSHPLPRTS

Sequences:

>Translated_373_residues
MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNPLEANIRALRKEIRKAKEMTR
GILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELPRYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFD
YLPDAFVVEGPKAGGHLGFKPEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM
GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKCAFHCIHSCKVEKSPYCIAAA
LLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEFEASRLSHPLPRTS
>Mature_373_residues
MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNPLEANIRALRKEIRKAKEMTR
GILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELPRYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFD
YLPDAFVVEGPKAGGHLGFKPEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM
GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKCAFHCIHSCKVEKSPYCIAAA
LLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEFEASRLSHPLPRTS

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 40491; Mature: 40491

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNP
CCCCCCCHHHHHHHCCCEECCCCCCEEHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCC
LEANIRALRKEIRKAKEMTRGILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH
RYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFDYLPDAFVVEGPKAGGHLGFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
PEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHH
GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKC
CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
AFHCIHSCKVEKSPYCIAAALLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEF
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
EASRLSHPLPRTS
HHHHHCCCCCCCC
>Mature Secondary Structure
MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNP
CCCCCCCHHHHHHHCCCEECCCCCCEEHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCC
LEANIRALRKEIRKAKEMTRGILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH
RYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFDYLPDAFVVEGPKAGGHLGFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
PEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHH
GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKC
CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
AFHCIHSCKVEKSPYCIAAALLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEF
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
EASRLSHPLPRTS
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA