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The map label for this gene is fliC [C]

Identifier: 78356613

GI number: 78356613

Start: 1593387

End: 1594280

Strand: Reverse

Name: fliC [C]

Synonym: Dde_1570

Alternate gene names: 78356613

Gene position: 1594280-1593387 (Counterclockwise)

Preceding gene: 78356622

Following gene: 78356607

Centisome position: 42.74

GC content: 58.05

Gene sequence:

>894_bases
ATGTCTCTTATTATCAACCACAACTTGATGGCCCTTAATGCGGCGAACAACCTCGGCAACTCGTACAGCAAGCTTGCCAC
CTCCATCCGCCGTCTTTCATCGGGGCTGCGAGTGGGAACAGCAGCCGACGACGCCGCCGGTCTGGCAATCCGCGAAATCA
TGCGTTCGGACATTGCCGCCCTTAATCAGGGCATCCGCAACGCCAACGATGCAATTTCGCTTATCCAGACGGCCGACGGC
GCTCTGCAGGTCATCGACGAAAAACTCATCCGTATGAAGGAGCTGGCCGAACAGGCCGCAACGGGTACATACACCTCGGC
CCAGCGTCTGATAATCGACTCCGAATATCAGGCCATGGCCTCGGAAATCACCCGAATAGCCAACTCCACAGACTTCAACG
GCATCCATCTGCTCAACGGGCACCTTTCCGGCGCCACCCATGATGGAAGCGGCCTTGTGGCAACCGGTAAACTCAAGGTG
CACTTCGGCACAGCCAACGACTCGGCGGAAGACTATTACTACATCCAGATCGGCGCCTCCACGGCATCTGCACTGGGCGT
AGGCACGCAGGCGGGCACCTCTGCCAAAGCGGCCAGCATTTCCACCCAGTCCGCGGCACAGGCTGCACTGGCAGCCCTTG
AGGACGCCATCGTGTCAAAGGATAAAATCCGGGCAAACCTCGGAGCCATCCAGAACCGGCTGGAAAACACCATAACCAAC
TTGCAGATCCAGTCCGAAAACCTGCAGGCGGCGGAATCACGTATTTCCGACGTGGACGTCTCTCTGGAGATGACAGAATT
CACACGCCAGCAAATTCTGTCACAGTCCGCGGTCGCCATGCTGTCACAGGCCAACACGCTCCCCAGACTGGCCCTGAATC
TTCTCGGGGCCTGA

Upstream 100 bases:

>100_bases
AGTGGGGAGGGGAGAACCTTTTGGTCAGAAGAGCGTGACTTCAGCTGACCGCTCCCCTACTGAGGCAAGGAAGCCGTGAC
TCATTCAAGGAGGAATGGTC

Downstream 100 bases:

>100_bases
TTACGACACATCGGGAGAGGCCGTAGCAGCAAAACAATCACAGGCTTCCGCATTGCCGGAAGCGGCACGAAGTCATTACT
TCAGGGAAAGACCATCCTCC

Product: flagellin

Products: NA

Alternate protein names: Class B [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSLIINHNLMALNAANNLGNSYSKLATSIRRLSSGLRVGTAADDAAGLAIREIMRSDIAALNQGIRNANDAISLIQTADG
ALQVIDEKLIRMKELAEQAATGTYTSAQRLIIDSEYQAMASEITRIANSTDFNGIHLLNGHLSGATHDGSGLVATGKLKV
HFGTANDSAEDYYYIQIGASTASALGVGTQAGTSAKAASISTQSAAQAALAALEDAIVSKDKIRANLGAIQNRLENTITN
LQIQSENLQAAESRISDVDVSLEMTEFTRQQILSQSAVAMLSQANTLPRLALNLLGA

Sequences:

>Translated_297_residues
MSLIINHNLMALNAANNLGNSYSKLATSIRRLSSGLRVGTAADDAAGLAIREIMRSDIAALNQGIRNANDAISLIQTADG
ALQVIDEKLIRMKELAEQAATGTYTSAQRLIIDSEYQAMASEITRIANSTDFNGIHLLNGHLSGATHDGSGLVATGKLKV
HFGTANDSAEDYYYIQIGASTASALGVGTQAGTSAKAASISTQSAAQAALAALEDAIVSKDKIRANLGAIQNRLENTITN
LQIQSENLQAAESRISDVDVSLEMTEFTRQQILSQSAVAMLSQANTLPRLALNLLGA
>Mature_296_residues
SLIINHNLMALNAANNLGNSYSKLATSIRRLSSGLRVGTAADDAAGLAIREIMRSDIAALNQGIRNANDAISLIQTADGA
LQVIDEKLIRMKELAEQAATGTYTSAQRLIIDSEYQAMASEITRIANSTDFNGIHLLNGHLSGATHDGSGLVATGKLKVH
FGTANDSAEDYYYIQIGASTASALGVGTQAGTSAKAASISTQSAAQAALAALEDAIVSKDKIRANLGAIQNRLENTITNL
QIQSENLQAAESRISDVDVSLEMTEFTRQQILSQSAVAMLSQANTLPRLALNLLGA

Specific function: Component of the core of the flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=144, Percent_Identity=44.4444444444444, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31198; Mature: 31067

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIINHNLMALNAANNLGNSYSKLATSIRRLSSGLRVGTAADDAAGLAIREIMRSDIAA
CEEEEECCEEEEECCHHCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LNQGIRNANDAISLIQTADGALQVIDEKLIRMKELAEQAATGTYTSAQRLIIDSEYQAMA
HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH
SEITRIANSTDFNGIHLLNGHLSGATHDGSGLVATGKLKVHFGTANDSAEDYYYIQIGAS
HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECC
TASALGVGTQAGTSAKAASISTQSAAQAALAALEDAIVSKDKIRANLGAIQNRLENTITN
CHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LQIQSENLQAAESRISDVDVSLEMTEFTRQQILSQSAVAMLSQANTLPRLALNLLGA
CEEECCHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
SLIINHNLMALNAANNLGNSYSKLATSIRRLSSGLRVGTAADDAAGLAIREIMRSDIAA
EEEEECCEEEEECCHHCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LNQGIRNANDAISLIQTADGALQVIDEKLIRMKELAEQAATGTYTSAQRLIIDSEYQAMA
HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH
SEITRIANSTDFNGIHLLNGHLSGATHDGSGLVATGKLKVHFGTANDSAEDYYYIQIGAS
HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECC
TASALGVGTQAGTSAKAASISTQSAAQAALAALEDAIVSKDKIRANLGAIQNRLENTITN
CHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LQIQSENLQAAESRISDVDVSLEMTEFTRQQILSQSAVAMLSQANTLPRLALNLLGA
CEEECCHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3045083 [H]