| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pgl [H]
Identifier: 78356371
GI number: 78356371
Start: 1344375
End: 1345190
Strand: Reverse
Name: pgl [H]
Synonym: Dde_1324
Alternate gene names: 78356371
Gene position: 1345190-1344375 (Counterclockwise)
Preceding gene: 78356372
Following gene: 78356364
Centisome position: 36.06
GC content: 61.15
Gene sequence:
>816_bases ATGGCACACGACGTACGGCTCCGGACGGCACATGCCGCCACGGATTACGTCGTAAATCACCATGGGGGTTACATCATGAC ATTGGTTTCGCATCTTTCGCTGTATATCACACCCGACCCCGATGCCATGGCACGGCAGGCGGCGGAGCTTATAATAGAAC GCTGCGCCGCGGCAGTGGCCGCGCACGATGCCTTCACCATAGCGCTTTCCGGCGGCAGCACGCCGGTGCCGCTGTTCCGG CTGCTTGCCGGGCAGGAATACGCAGACCGCATTCCGTGGAATAAAGTCAGCGTATACTGGGTGGACGAACGCTGCGTCCA CCCCGACCACGAGCAGAGCAACTACCGTGTGGCCCGCGACGAGCTGCTGCACAAGGTGGACGCCACAAAATTCTACCGTA TGAAAGGAGAAGCACAGCCGGAAATTGCCGCACAGGCATATGAAGAACTGCTGCGCAGGCAGTTCGGGCTGTCAGCGGGT GAGCTGCCCCGCTTTGACTGCGTGCTGCTGGGAACAGGCGCCGATGGTCATACGGCATCGCTTTTTCCGCACTCCACCGG ACTGGAGGAGCGCGAAAAACTGGTCATTGACCAGTATGTACCCTCGCTGCACAGCACGCGTCTGACCCTGACCCTGCCGG TCATCAACAATGCCCGCGATGTCATTGTCATGGCCAGCGGTCACGCGAAACATCCGGTGCTGGCAAAAGCGCTCAACCTG CTGGAACCACGCCTCCTGCCCATACAGCACATCGCCCCCGCTGCCGGCAGGCTGAGCTGGGTCATTGATCAGGCCGCAGC GCAGCCGGCAGCCTGA
Upstream 100 bases:
>100_bases CCGCACCGTCAATGCTTTCAGCGCCTAGCAGCCCCACCGGCGCTGCGCCTTTGCACCGGATGCATCTGCTCTATTCCAAA ACAACGCAGGGTGTGGCACC
Downstream 100 bases:
>100_bases GCGTTCTGCAGGCCGCAGCATAACGGTTCCGCTGCGGACGCAGGCATTTGCTAAAAAACAGACGGGAGTACCTGAGCGTA CTCCCGTCCTTCTGTTTCGT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAHDVRLRTAHAATDYVVNHHGGYIMTLVSHLSLYITPDPDAMARQAAELIIERCAAAVAAHDAFTIALSGGSTPVPLFR LLAGQEYADRIPWNKVSVYWVDERCVHPDHEQSNYRVARDELLHKVDATKFYRMKGEAQPEIAAQAYEELLRRQFGLSAG ELPRFDCVLLGTGADGHTASLFPHSTGLEEREKLVIDQYVPSLHSTRLTLTLPVINNARDVIVMASGHAKHPVLAKALNL LEPRLLPIQHIAPAAGRLSWVIDQAAAQPAA
Sequences:
>Translated_271_residues MAHDVRLRTAHAATDYVVNHHGGYIMTLVSHLSLYITPDPDAMARQAAELIIERCAAAVAAHDAFTIALSGGSTPVPLFR LLAGQEYADRIPWNKVSVYWVDERCVHPDHEQSNYRVARDELLHKVDATKFYRMKGEAQPEIAAQAYEELLRRQFGLSAG ELPRFDCVLLGTGADGHTASLFPHSTGLEEREKLVIDQYVPSLHSTRLTLTLPVINNARDVIVMASGHAKHPVLAKALNL LEPRLLPIQHIAPAAGRLSWVIDQAAAQPAA >Mature_270_residues AHDVRLRTAHAATDYVVNHHGGYIMTLVSHLSLYITPDPDAMARQAAELIIERCAAAVAAHDAFTIALSGGSTPVPLFRL LAGQEYADRIPWNKVSVYWVDERCVHPDHEQSNYRVARDELLHKVDATKFYRMKGEAQPEIAAQAYEELLRRQFGLSAGE LPRFDCVLLGTGADGHTASLFPHSTGLEEREKLVIDQYVPSLHSTRLTLTLPVINNARDVIVMASGHAKHPVLAKALNLL EPRLLPIQHIAPAAGRLSWVIDQAAAQPAA
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=226, Percent_Identity=38.0530973451327, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI52145310, Length=213, Percent_Identity=38.0281690140845, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI115533058, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533060, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324362, Length=215, Percent_Identity=35.8139534883721, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319918, Length=213, Percent_Identity=35.6807511737089, Blast_Score=102, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321957, Length=241, Percent_Identity=29.8755186721992, Blast_Score=90, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321687, Length=251, Percent_Identity=26.6932270916335, Blast_Score=75, Evalue=9e-15, Organism=Drosophila melanogaster, GI24641119, Length=229, Percent_Identity=33.1877729257642, Blast_Score=106, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 29821; Mature: 29690
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDVRLRTAHAATDYVVNHHGGYIMTLVSHLSLYITPDPDAMARQAAELIIERCAAAVA CCCCEEEEEHHHHHHEEEECCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHH AHDAFTIALSGGSTPVPLFRLLAGQEYADRIPWNKVSVYWVDERCVHPDHEQSNYRVARD HCCEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHH ELLHKVDATKFYRMKGEAQPEIAAQAYEELLRRQFGLSAGELPRFDCVLLGTGADGHTAS HHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEE LFPHSTGLEEREKLVIDQYVPSLHSTRLTLTLPVINNARDVIVMASGHAKHPVLAKALNL ECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHH LEPRLLPIQHIAPAAGRLSWVIDQAAAQPAA HCCCCCCHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AHDVRLRTAHAATDYVVNHHGGYIMTLVSHLSLYITPDPDAMARQAAELIIERCAAAVA CCCEEEEEHHHHHHEEEECCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHH AHDAFTIALSGGSTPVPLFRLLAGQEYADRIPWNKVSVYWVDERCVHPDHEQSNYRVARD HCCEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHH ELLHKVDATKFYRMKGEAQPEIAAQAYEELLRRQFGLSAGELPRFDCVLLGTGADGHTAS HHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEE LFPHSTGLEEREKLVIDQYVPSLHSTRLTLTLPVINNARDVIVMASGHAKHPVLAKALNL ECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHH LEPRLLPIQHIAPAAGRLSWVIDQAAAQPAA HCCCCCCHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]