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The map label for this gene is yigC [C]

Identifier: 78356370

GI number: 78356370

Start: 1342314

End: 1344263

Strand: Direct

Name: yigC [C]

Synonym: Dde_1323

Alternate gene names: 78356370

Gene position: 1342314-1344263 (Clockwise)

Preceding gene: 78356369

Following gene: 78356390

Centisome position: 35.98

GC content: 59.74

Gene sequence:

>1950_bases
ATGACAGCGCGGCGTTTAACGACGCCGCGCGCTTGCGCTGAAAGCATATTTGCGCCACTCTTGCGCCTCGACGACACACC
TACTCACCTTAACAGAGAAGGAGATGGTTCCGTGCGTTACCGCAACATGACCATGCTTCTGGAAGACCTTGAGCGCCACG
GGCAGCTTATCCGTGTGGATGCCGAGGTGGACCCGTACCTTGAAATTGCCGCCATCCAGCGCCGTGCGTATCGCGCGGGC
GCACCGGCAATGCTGTTTACCCGTGTGAAAGGCACGCGTTTTCCCATGGTTGCCAACCTGTTCGGCACCATGGACCGCAC
GCGGTTCATTTTCCGCTCTTCGCTGCGTGCGCTGGAAGGACTGTTCCGGCTCAAGGTTGATCCGTTCGACTTTTTCAAAC
ATCCCTGGCGCTATGCCGGGGTTCCCCGTGCGCTTTTCAGCGCCATGCCGCGCACGGTGAAAAAAGGTTCTGTTTTTGAA
AACACCGCTGCCGTCAGCGAACTGCCGCAGCTTGTCTCGTGGCCGCGTGACGGCGGCGGGTATGTGACGCTGCCGCAGGT
GTATACAGAAAGCCCCGAGCATCCGGGGTACAAACATTCCAATATGGGAATGTACCGCGTGCAGCTTACCGGCCCGCACT
ATGAAAAAGACAGGGAAGTGGGGCTGCACTACCAGATACACCGGGGCATTGGGTACCACCACGCGCAGGCACTGCGTGTG
GGCGAGTCGCTGAAAGTCAATATCTTTGTGGGTGGCCCCCCGGCCATGACTCTGGCCGCGGTGATGCCTCTGCCCGATGA
TATTCCTGAAGTGGTTTTTGCCGGTGCGCTGGCCGGGTTCCGTATTCCCATGGTGAGGCGCGGGGGTGACCTGCCCGTGC
TGGCAGACGCCGATTTCTGCATCAGCGGCACCATAATGCCGTATCAGAAGCCGGAAGGGCCTTTCGGGGATCATCTGGGG
TATTACAGTCTGGAGCACGATTTTCCCGTGCTGCGCGTGGATAATGTCTGGCACCGTAACGGCGCTGTCTGGCCGTTTAC
CACTGTGGGACGCCCCCCGCAGGAAGATACCGTTTTCGGCGATTTTATCCACGAGCTGACTGCGGCCATGGTGCCGCAGG
TGTTCAGCGGGGTGCACGAGATACAGGCGGTTGACGCCGCGGGTGTGCATCCGCTGTTGCTGGCCATAGGCAGCGAACGT
TATGTACCCTGGGCCAGCGAACGCCAGCCGCAGGAACTTATCACATCGGGCATGGCGTTGCTGGGCAACACCCAGACCTC
GCTTTCCAAGTATGTGATGATCACCGCGCGCGAAGACGCTCCCGCGCTGACAACTCATGACTACGACGGGTTCTTCAAGC
ATATGCTGGAGCGTACCGATTTTGGCCGTGACCTGCATTTTATCACGCGTACCACGATAGATACGTTGGATTACACCGGT
ATCAGCCTTAATCAGGGTTCCAAACTTGTCTGGACAGCCTGTGGTGAGAAAAAGCGCGCCCTTGCCCACCATCTGCCTGC
GGATCTTACTCTGCCTGCGGGGTTTGGTGATGCGCGGCTGTTCGGGCGGGGTATTGTGGTGCTCAGAGGACCGGCGCATA
CGGCAGCGCGTGACGAACATGACGAGGCCATGTTCCGGCTTGCCGAGCACCTCGGCGGTATCGGCGGGCTGGAAGGAACA
CCGCTTTTTGTGGTGGCGGACGATGCCGCTTTTACGGCAGAGGACTGGACGAACTTCCTGTGGGTCACGTTCACCCGCTC
TGATCCCGCAACGGATATGTACGGTGCAGGCGCCTTTACCCATTGCAAGCACTGGGGATGCCGCGGGCCGCTCATCATTG
ACGCCCGGCTGAAATCGTTCCATGCCCCTGCGCTGGAGACAGACCCTGATGTGGAACGCAGGGTGGACGAACTGGGTGCC
CCCGGGGGGCCGCTGCACGGATTTGTGTAA

Upstream 100 bases:

>100_bases
GCAGCCTTTCCGGCGAGGCTGCCGCTTTGCGGGCTCTCATTGATTCCATGCATGACGAAACCTAGCCGCGGCGGAACACC
GTCACAGCGGCAGGAAGGGT

Downstream 100 bases:

>100_bases
GGCGTTTACATACGAAACAGAAGGACGGGAGTACGCTCAGGTACTCCCGTCTGTTTTTTAGCAAATGCCTGCGTCCGCAG
CGGAACCGTTATGCTGCGGC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MTARRLTTPRACAESIFAPLLRLDDTPTHLNREGDGSVRYRNMTMLLEDLERHGQLIRVDAEVDPYLEIAAIQRRAYRAG
APAMLFTRVKGTRFPMVANLFGTMDRTRFIFRSSLRALEGLFRLKVDPFDFFKHPWRYAGVPRALFSAMPRTVKKGSVFE
NTAAVSELPQLVSWPRDGGGYVTLPQVYTESPEHPGYKHSNMGMYRVQLTGPHYEKDREVGLHYQIHRGIGYHHAQALRV
GESLKVNIFVGGPPAMTLAAVMPLPDDIPEVVFAGALAGFRIPMVRRGGDLPVLADADFCISGTIMPYQKPEGPFGDHLG
YYSLEHDFPVLRVDNVWHRNGAVWPFTTVGRPPQEDTVFGDFIHELTAAMVPQVFSGVHEIQAVDAAGVHPLLLAIGSER
YVPWASERQPQELITSGMALLGNTQTSLSKYVMITAREDAPALTTHDYDGFFKHMLERTDFGRDLHFITRTTIDTLDYTG
ISLNQGSKLVWTACGEKKRALAHHLPADLTLPAGFGDARLFGRGIVVLRGPAHTAARDEHDEAMFRLAEHLGGIGGLEGT
PLFVVADDAAFTAEDWTNFLWVTFTRSDPATDMYGAGAFTHCKHWGCRGPLIIDARLKSFHAPALETDPDVERRVDELGA
PGGPLHGFV

Sequences:

>Translated_649_residues
MTARRLTTPRACAESIFAPLLRLDDTPTHLNREGDGSVRYRNMTMLLEDLERHGQLIRVDAEVDPYLEIAAIQRRAYRAG
APAMLFTRVKGTRFPMVANLFGTMDRTRFIFRSSLRALEGLFRLKVDPFDFFKHPWRYAGVPRALFSAMPRTVKKGSVFE
NTAAVSELPQLVSWPRDGGGYVTLPQVYTESPEHPGYKHSNMGMYRVQLTGPHYEKDREVGLHYQIHRGIGYHHAQALRV
GESLKVNIFVGGPPAMTLAAVMPLPDDIPEVVFAGALAGFRIPMVRRGGDLPVLADADFCISGTIMPYQKPEGPFGDHLG
YYSLEHDFPVLRVDNVWHRNGAVWPFTTVGRPPQEDTVFGDFIHELTAAMVPQVFSGVHEIQAVDAAGVHPLLLAIGSER
YVPWASERQPQELITSGMALLGNTQTSLSKYVMITAREDAPALTTHDYDGFFKHMLERTDFGRDLHFITRTTIDTLDYTG
ISLNQGSKLVWTACGEKKRALAHHLPADLTLPAGFGDARLFGRGIVVLRGPAHTAARDEHDEAMFRLAEHLGGIGGLEGT
PLFVVADDAAFTAEDWTNFLWVTFTRSDPATDMYGAGAFTHCKHWGCRGPLIIDARLKSFHAPALETDPDVERRVDELGA
PGGPLHGFV
>Mature_648_residues
TARRLTTPRACAESIFAPLLRLDDTPTHLNREGDGSVRYRNMTMLLEDLERHGQLIRVDAEVDPYLEIAAIQRRAYRAGA
PAMLFTRVKGTRFPMVANLFGTMDRTRFIFRSSLRALEGLFRLKVDPFDFFKHPWRYAGVPRALFSAMPRTVKKGSVFEN
TAAVSELPQLVSWPRDGGGYVTLPQVYTESPEHPGYKHSNMGMYRVQLTGPHYEKDREVGLHYQIHRGIGYHHAQALRVG
ESLKVNIFVGGPPAMTLAAVMPLPDDIPEVVFAGALAGFRIPMVRRGGDLPVLADADFCISGTIMPYQKPEGPFGDHLGY
YSLEHDFPVLRVDNVWHRNGAVWPFTTVGRPPQEDTVFGDFIHELTAAMVPQVFSGVHEIQAVDAAGVHPLLLAIGSERY
VPWASERQPQELITSGMALLGNTQTSLSKYVMITAREDAPALTTHDYDGFFKHMLERTDFGRDLHFITRTTIDTLDYTGI
SLNQGSKLVWTACGEKKRALAHHLPADLTLPAGFGDARLFGRGIVVLRGPAHTAARDEHDEAMFRLAEHLGGIGGLEGTP
LFVVADDAAFTAEDWTNFLWVTFTRSDPATDMYGAGAFTHCKHWGCRGPLIIDARLKSFHAPALETDPDVERRVDELGAP
GGPLHGFV

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=496, Percent_Identity=28.0241935483871, Blast_Score=176, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 72047; Mature: 71916

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRLTTPRACAESIFAPLLRLDDTPTHLNREGDGSVRYRNMTMLLEDLERHGQLIRVD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEE
AEVDPYLEIAAIQRRAYRAGAPAMLFTRVKGTRFPMVANLFGTMDRTRFIFRSSLRALEG
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFRLKVDPFDFFKHPWRYAGVPRALFSAMPRTVKKGSVFENTAAVSELPQLVSWPRDGGG
HHHEECCHHHHHCCCHHHCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
YVTLPQVYTESPEHPGYKHSNMGMYRVQLTGPHYEKDREVGLHYQIHRGIGYHHAQALRV
EEEECHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHC
GESLKVNIFVGGPPAMTLAAVMPLPDDIPEVVFAGALAGFRIPMVRRGGDLPVLADADFC
CCCEEEEEEECCCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCE
ISGTIMPYQKPEGPFGDHLGYYSLEHDFPVLRVDNVWHRNGAVWPFTTVGRPPQEDTVFG
EECEECCCCCCCCCCCCCCCCEEECCCCCEEEECCEEECCCCCCEECCCCCCCCCCCHHH
DFIHELTAAMVPQVFSGVHEIQAVDAAGVHPLLLAIGSERYVPWASERQPQELITSGMAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHH
LGNTQTSLSKYVMITAREDAPALTTHDYDGFFKHMLERTDFGRDLHFITRTTIDTLDYTG
HCCCHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCC
ISLNQGSKLVWTACGEKKRALAHHLPADLTLPAGFGDARLFGRGIVVLRGPAHTAARDEH
EEECCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCCHHEECCCEEEEECCCCCCCCCHH
DEAMFRLAEHLGGIGGLEGTPLFVVADDAAFTAEDWTNFLWVTFTRSDPATDMYGAGAFT
HHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHH
HCKHWGCRGPLIIDARLKSFHAPALETDPDVERRVDELGAPGGPLHGFV
HHHHCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TARRLTTPRACAESIFAPLLRLDDTPTHLNREGDGSVRYRNMTMLLEDLERHGQLIRVD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEE
AEVDPYLEIAAIQRRAYRAGAPAMLFTRVKGTRFPMVANLFGTMDRTRFIFRSSLRALEG
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFRLKVDPFDFFKHPWRYAGVPRALFSAMPRTVKKGSVFENTAAVSELPQLVSWPRDGGG
HHHEECCHHHHHCCCHHHCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
YVTLPQVYTESPEHPGYKHSNMGMYRVQLTGPHYEKDREVGLHYQIHRGIGYHHAQALRV
EEEECHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHC
GESLKVNIFVGGPPAMTLAAVMPLPDDIPEVVFAGALAGFRIPMVRRGGDLPVLADADFC
CCCEEEEEEECCCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCE
ISGTIMPYQKPEGPFGDHLGYYSLEHDFPVLRVDNVWHRNGAVWPFTTVGRPPQEDTVFG
EECEECCCCCCCCCCCCCCCCEEECCCCCEEEECCEEECCCCCCEECCCCCCCCCCCHHH
DFIHELTAAMVPQVFSGVHEIQAVDAAGVHPLLLAIGSERYVPWASERQPQELITSGMAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHH
LGNTQTSLSKYVMITAREDAPALTTHDYDGFFKHMLERTDFGRDLHFITRTTIDTLDYTG
HCCCHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCC
ISLNQGSKLVWTACGEKKRALAHHLPADLTLPAGFGDARLFGRGIVVLRGPAHTAARDEH
EEECCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCCHHEECCCEEEEECCCCCCCCCHH
DEAMFRLAEHLGGIGGLEGTPLFVVADDAAFTAEDWTNFLWVTFTRSDPATDMYGAGAFT
HHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHH
HCKHWGCRGPLIIDARLKSFHAPALETDPDVERRVDELGAPGGPLHGFV
HHHHCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]