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The map label for this gene is (hspc4-1 [H]

Identifier: 78356390

GI number: 78356390

Start: 1361551

End: 1361958

Strand: Direct

Name: (hspc4-1 [H]

Synonym: Dde_1343

Alternate gene names: 78356390

Gene position: 1361551-1361958 (Clockwise)

Preceding gene: 78356370

Following gene: 78356391

Centisome position: 36.5

GC content: 41.42

Gene sequence:

>408_bases
ATGGTAATTGATTTCAGTTCTCTTTATGAAATGCCGAGAAGTTTTGAAAAACTCTTTGATGAGTTTGCAAGAGCCAGCAA
AGGCGGATACATCAGAAACGCCACTGCAGGACTCAACATTGTTGAAGATGATGAAAACTATTATGTAGATCTTCTTGTTC
CTGCTGTAGACCCCGAAAATATTGATCTTACTATTTCTGACAAGAATCTTATAATTCGTGGTGAAGTGGAAAAAGAAGCT
GGTAAATTCTTCAGGCAGGAAAGGGGCTATGGTTCTTTTCAGCGTGTCATTACGCTGAATGCACCTGTTGACCGTGATGC
CGTGCAGGCAACCTGCGAAAATGGCATTCTGAGGGTTGTTCTTCCTAAATCGGAAGCCGTCAAACCCAGAAAAATAGCTA
TTTCCTGA

Upstream 100 bases:

>100_bases
GGCAGGGCTTTTTTTGCGCAGAAAAAAAATTAACTGCTGTTGACAGCGCATAAAGCTGCTTTATCTTGAACGCAAGACGA
TGAATCAGGAGGTCATTACT

Downstream 100 bases:

>100_bases
TGGAGGTCTTCACATGAACACTGAAGTTGTAAAACACGAAGAAAAGGCATTGCCCAAAGTTATTCCTTCCACGGACATTC
TTGAAATGGAAGACGGGTTT

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MVIDFSSLYEMPRSFEKLFDEFARASKGGYIRNATAGLNIVEDDENYYVDLLVPAVDPENIDLTISDKNLIIRGEVEKEA
GKFFRQERGYGSFQRVITLNAPVDRDAVQATCENGILRVVLPKSEAVKPRKIAIS

Sequences:

>Translated_135_residues
MVIDFSSLYEMPRSFEKLFDEFARASKGGYIRNATAGLNIVEDDENYYVDLLVPAVDPENIDLTISDKNLIIRGEVEKEA
GKFFRQERGYGSFQRVITLNAPVDRDAVQATCENGILRVVLPKSEAVKPRKIAIS
>Mature_135_residues
MVIDFSSLYEMPRSFEKLFDEFARASKGGYIRNATAGLNIVEDDENYYVDLLVPAVDPENIDLTISDKNLIIRGEVEKEA
GKFFRQERGYGSFQRVITLNAPVDRDAVQATCENGILRVVLPKSEAVKPRKIAIS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15188; Mature: 15188

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDFSSLYEMPRSFEKLFDEFARASKGGYIRNATAGLNIVEDDENYYVDLLVPAVDPEN
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCC
IDLTISDKNLIIRGEVEKEAGKFFRQERGYGSFQRVITLNAPVDRDAVQATCENGILRVV
EEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCEEEEE
LPKSEAVKPRKIAIS
ECCCCCCCCEEEECC
>Mature Secondary Structure
MVIDFSSLYEMPRSFEKLFDEFARASKGGYIRNATAGLNIVEDDENYYVDLLVPAVDPEN
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCC
IDLTISDKNLIIRGEVEKEAGKFFRQERGYGSFQRVITLNAPVDRDAVQATCENGILRVV
EEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCEEEEE
LPKSEAVKPRKIAIS
ECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA