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The map label for this gene is dcrA [H]

Identifier: 78356369

GI number: 78356369

Start: 1340245

End: 1342278

Strand: Direct

Name: dcrA [H]

Synonym: Dde_1322

Alternate gene names: 78356369

Gene position: 1340245-1342278 (Clockwise)

Preceding gene: 78356368

Following gene: 78356370

Centisome position: 35.93

GC content: 58.65

Gene sequence:

>2034_bases
ATGACAATTAAGGTAAGGCTGATTGCAGGACTGGGTGTGCTTGTTTTTCTGACAGTTCTGCTGGGCGGTGTGGGTATATT
CGCGCTGGAGCAGGGTAAAAAGGATCTCAGCCATCTGATAGACGAACAGGTGGAGCTGCGTGACATGGCGGATGCCATAC
GCTATGGCGCGGCGCAGCACCGCAGGTTTGAAAAAGACCTGTTTCTGAACATCGGCGACAGAGAGCGGCAACAGCGTTAT
CTTGCCCGTTTCCGCGAGGCTTCGGCCGCGCTCGGCGCAGATATTGAGCGTCTGGGCCGCATAGTTTCCGCCAGCAGTGC
CATGAGCGAACACCGGAGACTGCCGGATGTGCTGAAACAGGCGCACGCGGACTATGTGCGGGCATTTGAATCGCTGGCCG
CGGAAACCATGGATGACCCTGACCTGACTCCGCAGGAAGCCAACAGGCGGTTCGGCTCGGCCAAGGAGCATATCTACCTG
CTGGAAAGTACAACAGATGAAATTGTCCGGCTGGTGACACACGGCCTGGACAGTTACATTGAGCTTATTCTCAGCCGTAA
CAATACATTGCGCCTGTTGATGATCTGCCTGACGGTGTTTGTGGCTGCGGCGGGAGCGGGGGCGGCCCGCTGGCTGTTCC
GTTCTGTGGAGGTTCCGCTCGCGGCTGTTATAGAACATACGGAACAGGTGGCCGACGGCAGGCTGGATCATCGCAGCACA
TACCGTTTTTCCGGTGAAATGCAGACGCTTTTCGGTGCTGTGGAACGCATGGTGCAGTCCATCAAAGAACGCATTCTGCA
TAATCAGGCTATCATTAACGGTGTACCCGATCCTATTATCGTGACGGATGCCGGCTGTATGATAACCTCGGTGAATGCTG
CCGCACTGGAGCTTCTGGGCAAGGATGAAAAGACGCTGGCAGGGCAGGCGCTGACTTCTGTGCTGGGGCGCGATTTTCAC
GGTGGCGAGTCTCCGGTGGAAACCATTGCCCGCAGCGGCGCAGCGGGGCACGCCCTCACGTTTGCCCATGCTTCGGGAGG
GCAGGAGCGGTATTACCATGCGCGGGCCGTGAAGCTGGCGGACGGCGGGGGACATGTGTACGGCTATATGGAGGTTCTGC
AGGATATCACATCAGTCAAGGCGGGCGAGCTGAACGCTCTGCGTCAGTCCGAGCGTCTGGCGGGAATCGCACGCAAGGCT
GAAGGAATTGCTGCCAATGTGGCCGAGGCTTCCGGAATTTTGGAAGAGCAGGTTACCGAGGCTGCCCGGGGTGCCGACCA
GCAGCAGCAGCGCAGTTCGGAGTCGGCCACAGCCATGGAAGAGATGAACGCCACGGTACGGGAAGTGGCGCAGAATGCTT
CGGATACGCATCTGATGACCGAAGACGTGCGCCGCAAGGCGTCGCATGGTGCCGAACTGGTTGACGGCGTGGTGCGTGCG
GTGGACGGGCTGGAACGTCAGTCGCTTGAACTGCGTACGGAAATGGAGCAGCTGGGGGCCAAAGCGGCGGATACAGGCAA
GGTGCTGGGAGTGATAACGGATATTGCGGACCAGACAAACCTGCTCGCCCTTAATGCGGCCATAGAGGCCGCCCGTGCCG
GAGATGCCGGAAGAGGGTTTGCCGTAGTTGCCGACGAGGTGCGCAAGCTGGCGGAAAAAACCATGCAGGCCACCGGTGAG
GTGGAGCAGGTCATCATGGGTATTCAGCAGTACACCGCGCGCAGTGTGCAGGCTACGGAAACCGCAGTACGCGCCGTAAG
CGAAAGCCGCGGGCTGGCCGGAGAAGCAGGACGTATGCTGCACGAAATAGTGGGTGCGGTGCATACTGCCAGCGATCAGG
TAAATTCCATTGCCACCGCAGCGGAAGAACAGGCCGCCACCAGTGAGGAAATTAACAGGATAATTATGGAAGTAAATGAA
ATTTCTGATGATACGGCACAGCGGATGGCCGAGGCGGAGCATGCTGTGCGCAGCCTTTCCGGCGAGGCTGCCGCTTTGCG
GGCTCTCATTGATTCCATGCATGACGAAACCTAG

Upstream 100 bases:

>100_bases
GTTTATGTGCTATGATCCTTCAAGGTAACCGTGCGCACATCCGGCGGCGCACGTCCGGCGGCGGGCGGAACGTATGAAAA
CAATTATTCCGGGGCAGGGT

Downstream 100 bases:

>100_bases
CCGCGGCGGAACACCGTCACAGCGGCAGGAAGGGTATGACAGCGCGGCGTTTAACGACGCCGCGCGCTTGCGCTGAAAGC
ATATTTGCGCCACTCTTGCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 676

Protein sequence:

>677_residues
MTIKVRLIAGLGVLVFLTVLLGGVGIFALEQGKKDLSHLIDEQVELRDMADAIRYGAAQHRRFEKDLFLNIGDRERQQRY
LARFREASAALGADIERLGRIVSASSAMSEHRRLPDVLKQAHADYVRAFESLAAETMDDPDLTPQEANRRFGSAKEHIYL
LESTTDEIVRLVTHGLDSYIELILSRNNTLRLLMICLTVFVAAAGAGAARWLFRSVEVPLAAVIEHTEQVADGRLDHRST
YRFSGEMQTLFGAVERMVQSIKERILHNQAIINGVPDPIIVTDAGCMITSVNAAALELLGKDEKTLAGQALTSVLGRDFH
GGESPVETIARSGAAGHALTFAHASGGQERYYHARAVKLADGGGHVYGYMEVLQDITSVKAGELNALRQSERLAGIARKA
EGIAANVAEASGILEEQVTEAARGADQQQQRSSESATAMEEMNATVREVAQNASDTHLMTEDVRRKASHGAELVDGVVRA
VDGLERQSLELRTEMEQLGAKAADTGKVLGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATGE
VEQVIMGIQQYTARSVQATETAVRAVSESRGLAGEAGRMLHEIVGAVHTASDQVNSIATAAEEQAATSEEINRIIMEVNE
ISDDTAQRMAEAEHAVRSLSGEAAALRALIDSMHDET

Sequences:

>Translated_677_residues
MTIKVRLIAGLGVLVFLTVLLGGVGIFALEQGKKDLSHLIDEQVELRDMADAIRYGAAQHRRFEKDLFLNIGDRERQQRY
LARFREASAALGADIERLGRIVSASSAMSEHRRLPDVLKQAHADYVRAFESLAAETMDDPDLTPQEANRRFGSAKEHIYL
LESTTDEIVRLVTHGLDSYIELILSRNNTLRLLMICLTVFVAAAGAGAARWLFRSVEVPLAAVIEHTEQVADGRLDHRST
YRFSGEMQTLFGAVERMVQSIKERILHNQAIINGVPDPIIVTDAGCMITSVNAAALELLGKDEKTLAGQALTSVLGRDFH
GGESPVETIARSGAAGHALTFAHASGGQERYYHARAVKLADGGGHVYGYMEVLQDITSVKAGELNALRQSERLAGIARKA
EGIAANVAEASGILEEQVTEAARGADQQQQRSSESATAMEEMNATVREVAQNASDTHLMTEDVRRKASHGAELVDGVVRA
VDGLERQSLELRTEMEQLGAKAADTGKVLGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATGE
VEQVIMGIQQYTARSVQATETAVRAVSESRGLAGEAGRMLHEIVGAVHTASDQVNSIATAAEEQAATSEEINRIIMEVNE
ISDDTAQRMAEAEHAVRSLSGEAAALRALIDSMHDET
>Mature_676_residues
TIKVRLIAGLGVLVFLTVLLGGVGIFALEQGKKDLSHLIDEQVELRDMADAIRYGAAQHRRFEKDLFLNIGDRERQQRYL
ARFREASAALGADIERLGRIVSASSAMSEHRRLPDVLKQAHADYVRAFESLAAETMDDPDLTPQEANRRFGSAKEHIYLL
ESTTDEIVRLVTHGLDSYIELILSRNNTLRLLMICLTVFVAAAGAGAARWLFRSVEVPLAAVIEHTEQVADGRLDHRSTY
RFSGEMQTLFGAVERMVQSIKERILHNQAIINGVPDPIIVTDAGCMITSVNAAALELLGKDEKTLAGQALTSVLGRDFHG
GESPVETIARSGAAGHALTFAHASGGQERYYHARAVKLADGGGHVYGYMEVLQDITSVKAGELNALRQSERLAGIARKAE
GIAANVAEASGILEEQVTEAARGADQQQQRSSESATAMEEMNATVREVAQNASDTHLMTEDVRRKASHGAELVDGVVRAV
DGLERQSLELRTEMEQLGAKAADTGKVLGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATGEV
EQVIMGIQQYTARSVQATETAVRAVSESRGLAGEAGRMLHEIVGAVHTASDQVNSIATAAEEQAATSEEINRIIMEVNEI
SDDTAQRMAEAEHAVRSLSGEAAALRALIDSMHDET

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=229, Percent_Identity=34.9344978165939, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1787690, Length=238, Percent_Identity=33.6134453781513, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI2367378, Length=217, Percent_Identity=33.6405529953917, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788194, Length=238, Percent_Identity=31.9327731092437, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1789453, Length=241, Percent_Identity=28.6307053941909, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 73053; Mature: 72922

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKVRLIAGLGVLVFLTVLLGGVGIFALEQGKKDLSHLIDEQVELRDMADAIRYGAAQH
CEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RRFEKDLFLNIGDRERQQRYLARFREASAALGADIERLGRIVSASSAMSEHRRLPDVLKQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AHADYVRAFESLAAETMDDPDLTPQEANRRFGSAKEHIYLLESTTDEIVRLVTHGLDSYI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
ELILSRNNTLRLLMICLTVFVAAAGAGAARWLFRSVEVPLAAVIEHTEQVADGRLDHRST
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
YRFSGEMQTLFGAVERMVQSIKERILHNQAIINGVPDPIIVTDAGCMITSVNAAALELLG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECHHHHHHHHC
KDEKTLAGQALTSVLGRDFHGGESPVETIARSGAAGHALTFAHASGGQERYYHARAVKLA
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHEEEEE
DGGGHVYGYMEVLQDITSVKAGELNALRQSERLAGIARKAEGIAANVAEASGILEEQVTE
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AARGADQQQQRSSESATAMEEMNATVREVAQNASDTHLMTEDVRRKASHGAELVDGVVRA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
VDGLERQSLELRTEMEQLGAKAADTGKVLGVITDIADQTNLLALNAAIEAARAGDAGRGF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCH
AVVADEVRKLAEKTMQATGEVEQVIMGIQQYTARSVQATETAVRAVSESRGLAGEAGRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HEIVGAVHTASDQVNSIATAAEEQAATSEEINRIIMEVNEISDDTAQRMAEAEHAVRSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GEAAALRALIDSMHDET
CHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIKVRLIAGLGVLVFLTVLLGGVGIFALEQGKKDLSHLIDEQVELRDMADAIRYGAAQH
EEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RRFEKDLFLNIGDRERQQRYLARFREASAALGADIERLGRIVSASSAMSEHRRLPDVLKQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AHADYVRAFESLAAETMDDPDLTPQEANRRFGSAKEHIYLLESTTDEIVRLVTHGLDSYI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
ELILSRNNTLRLLMICLTVFVAAAGAGAARWLFRSVEVPLAAVIEHTEQVADGRLDHRST
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
YRFSGEMQTLFGAVERMVQSIKERILHNQAIINGVPDPIIVTDAGCMITSVNAAALELLG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECHHHHHHHHC
KDEKTLAGQALTSVLGRDFHGGESPVETIARSGAAGHALTFAHASGGQERYYHARAVKLA
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHEEEEE
DGGGHVYGYMEVLQDITSVKAGELNALRQSERLAGIARKAEGIAANVAEASGILEEQVTE
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AARGADQQQQRSSESATAMEEMNATVREVAQNASDTHLMTEDVRRKASHGAELVDGVVRA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
VDGLERQSLELRTEMEQLGAKAADTGKVLGVITDIADQTNLLALNAAIEAARAGDAGRGF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCH
AVVADEVRKLAEKTMQATGEVEQVIMGIQQYTARSVQATETAVRAVSESRGLAGEAGRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
HEIVGAVHTASDQVNSIATAAEEQAATSEEINRIIMEVNEISDDTAQRMAEAEHAVRSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GEAAALRALIDSMHDET
CHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]