| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is aegA [H]
Identifier: 78356297
GI number: 78356297
Start: 1263741
End: 1265171
Strand: Reverse
Name: aegA [H]
Synonym: Dde_1250
Alternate gene names: 78356297
Gene position: 1265171-1263741 (Counterclockwise)
Preceding gene: 78356298
Following gene: 78356295
Centisome position: 33.92
GC content: 59.89
Gene sequence:
>1431_bases ATGAAAGCAAGTAAAAAGCCCGTCAGACCCAGAGTGCCCATGCCCGTGCAGCCGCCCGAAGAGCGGATACGCAATTTTGA CGAAGTAGCAACGGGTTACACGCTGGAAATGGCCGCAGAAGAAGCCGCGCGCTGTCTGCAGTGCAAAAAACCAAAATGTG TCAAAGGCTGTCCTGTGGAAGTGCCCATTCCGCAATTTATCGCGCATCTGGCGGCGGGCGACATAGACGCGGCCTACCGC ACCCTGAAAAGCACCAACAGTCTGCCGGCAGTCTGCGGACGGGTGTGCCCGCAGGAGGTGCAATGCGAAGGCGAATGCAT CCTGACAGCCAAAGGGCAGCCGGTGGCCATAGGCCGTCTGGAACGGTTTGTGGCAGACGAATACATGCACCGCGATGCCT GCGGGCTTATTTCCGGCAAGCCGGAATGCCCGCTGATTGATCCGCACAAAAAGGTTGCCTGCATCGGCAGCGGACCGGCC AGCCTGACAGCTGCCGGATATCTGGCGGCCAGAGGCTGCAAGGTGACCGTGTTTGAGGCTCTGCACGAACTGGGCGGGGT GCTGGTCTACGGTATTCCGGAATTCCGACTGCCCAAAGAAAAAATAGTAGCCAAAGAAGTGAATGCCCTGCGCGAACTGG AAGTGGACTTTGTCCGTAACCGTGTGGGCGGCAAGACATTCTCCATAGGCGAACTGTTCGCACAGGGGTACAGGGCGGTC TTCATCGGCGTAGGAGCCGGTCTTCCCAGATTTCTGGGTATTCCCGGTGAAAATCTCAACGGGGTTTTTTCCGCCAATGA ATACCTCACACGGGTCAATCTGGGACGGGCATACAGCTTTCCCGACTATGACACACCCATCATCCGCGGACGCCGTGTTA CCGTTTTCGGGGGCGGCAACGTAGCCATGGACGCGGCCCGTACAGCTCTGCGGCTGGGTGCGGATTCTGTGCACATCGTC TACAGGCGCACCGTGGCCGAAATGCCCGCCCGCCATGAAGAAGTGGAACACGCCATGGAAGAAGGCGTGAAAATGCAGGA GCTGTGCGCTCCCATTGCGTTTGTGCCCGATGCGGAGGGCTGCCTGAGTGGTGTACGCCTGCAGCAGATGCAGCTGGGAG AGCCTGATCAGTCCGGCAGGCGGCGTCCGGTGCCGGTGGAGGGAAGCGAACTGCTTCTGCCCACGGATCTGGCCGTCATT GCGGTGGGAACCCGCTCCAATCCGGTACTGCTGGAGGCCGAACCGGAGCTTGACCTGAACAGATGGGGCTACATCAGCAT AAACAGCGACACAGGCGAAACCAGCATACCCGACGTGTTTGCCGGCGGCGACATAGTCACCGGCGCAGCCACCGTGATAC TGGCCATGGGCGCAGGACGCACAGCCGCCAAGGAAATTGCCCGCAGGCTCGGTTGTCAGCCCGACGACTAG
Upstream 100 bases:
>100_bases GACGGCCATCAGGTGGACTTTGCCGAACTGCGGCAACGCCTGAACGCTTTCCGTCCGCTTGAGCGCGAATCCTATGACCA TCACTGCAGGTGCAAATGCC
Downstream 100 bases:
>100_bases CCCTCACGCCCCTGCCCGCTGCCGCCACGTCCAGCCCGGCGGCAGCGGGTCCGGTGCGGGGCAGACGGCAGCACCGGCGG CTCCCTCTGGCACCGGCAGA
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKASKKPVRPRVPMPVQPPEERIRNFDEVATGYTLEMAAEEAARCLQCKKPKCVKGCPVEVPIPQFIAHLAAGDIDAAYR TLKSTNSLPAVCGRVCPQEVQCEGECILTAKGQPVAIGRLERFVADEYMHRDACGLISGKPECPLIDPHKKVACIGSGPA SLTAAGYLAARGCKVTVFEALHELGGVLVYGIPEFRLPKEKIVAKEVNALRELEVDFVRNRVGGKTFSIGELFAQGYRAV FIGVGAGLPRFLGIPGENLNGVFSANEYLTRVNLGRAYSFPDYDTPIIRGRRVTVFGGGNVAMDAARTALRLGADSVHIV YRRTVAEMPARHEEVEHAMEEGVKMQELCAPIAFVPDAEGCLSGVRLQQMQLGEPDQSGRRRPVPVEGSELLLPTDLAVI AVGTRSNPVLLEAEPELDLNRWGYISINSDTGETSIPDVFAGGDIVTGAATVILAMGAGRTAAKEIARRLGCQPDD
Sequences:
>Translated_476_residues MKASKKPVRPRVPMPVQPPEERIRNFDEVATGYTLEMAAEEAARCLQCKKPKCVKGCPVEVPIPQFIAHLAAGDIDAAYR TLKSTNSLPAVCGRVCPQEVQCEGECILTAKGQPVAIGRLERFVADEYMHRDACGLISGKPECPLIDPHKKVACIGSGPA SLTAAGYLAARGCKVTVFEALHELGGVLVYGIPEFRLPKEKIVAKEVNALRELEVDFVRNRVGGKTFSIGELFAQGYRAV FIGVGAGLPRFLGIPGENLNGVFSANEYLTRVNLGRAYSFPDYDTPIIRGRRVTVFGGGNVAMDAARTALRLGADSVHIV YRRTVAEMPARHEEVEHAMEEGVKMQELCAPIAFVPDAEGCLSGVRLQQMQLGEPDQSGRRRPVPVEGSELLLPTDLAVI AVGTRSNPVLLEAEPELDLNRWGYISINSDTGETSIPDVFAGGDIVTGAATVILAMGAGRTAAKEIARRLGCQPDD >Mature_476_residues MKASKKPVRPRVPMPVQPPEERIRNFDEVATGYTLEMAAEEAARCLQCKKPKCVKGCPVEVPIPQFIAHLAAGDIDAAYR TLKSTNSLPAVCGRVCPQEVQCEGECILTAKGQPVAIGRLERFVADEYMHRDACGLISGKPECPLIDPHKKVACIGSGPA SLTAAGYLAARGCKVTVFEALHELGGVLVYGIPEFRLPKEKIVAKEVNALRELEVDFVRNRVGGKTFSIGELFAQGYRAV FIGVGAGLPRFLGIPGENLNGVFSANEYLTRVNLGRAYSFPDYDTPIIRGRRVTVFGGGNVAMDAARTALRLGADSVHIV YRRTVAEMPARHEEVEHAMEEGVKMQELCAPIAFVPDAEGCLSGVRLQQMQLGEPDQSGRRRPVPVEGSELLLPTDLAVI AVGTRSNPVLLEAEPELDLNRWGYISINSDTGETSIPDVFAGGDIVTGAATVILAMGAGRTAAKEIARRLGCQPDD
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=476, Percent_Identity=31.7226890756302, Blast_Score=189, Evalue=4e-48, Organism=Escherichia coli, GI1788811, Length=459, Percent_Identity=38.3442265795207, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI87082180, Length=477, Percent_Identity=37.1069182389937, Blast_Score=268, Evalue=6e-73, Organism=Escherichia coli, GI1789606, Length=466, Percent_Identity=36.2660944206009, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1788468, Length=445, Percent_Identity=32.3595505617978, Blast_Score=181, Evalue=8e-47, Organism=Escherichia coli, GI1789243, Length=465, Percent_Identity=33.9784946236559, Blast_Score=176, Evalue=3e-45, Organism=Caenorhabditis elegans, GI71984108, Length=470, Percent_Identity=32.1276595744681, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17570289, Length=480, Percent_Identity=28.3333333333333, Blast_Score=142, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6320030, Length=481, Percent_Identity=30.7692307692308, Blast_Score=163, Evalue=6e-41, Organism=Drosophila melanogaster, GI24665547, Length=490, Percent_Identity=31.0204081632653, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24665543, Length=490, Percent_Identity=31.0204081632653, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI28574881, Length=490, Percent_Identity=31.0204081632653, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24665539, Length=490, Percent_Identity=31.0204081632653, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24640763, Length=488, Percent_Identity=29.3032786885246, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI18858217, Length=488, Percent_Identity=29.3032786885246, Blast_Score=161, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 51243; Mature: 51243
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASKKPVRPRVPMPVQPPEERIRNFDEVATGYTLEMAAEEAARCLQCKKPKCVKGCPVE CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC VPIPQFIAHLAAGDIDAAYRTLKSTNSLPAVCGRVCPQEVQCEGECILTAKGQPVAIGRL CCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCEEEEECCCCEEHHHH ERFVADEYMHRDACGLISGKPECPLIDPHKKVACIGSGPASLTAAGYLAARGCKVTVFEA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEHHHHH LHELGGVLVYGIPEFRLPKEKIVAKEVNALRELEVDFVRNRVGGKTFSIGELFAQGYRAV HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEE FIGVGAGLPRFLGIPGENLNGVFSANEYLTRVNLGRAYSFPDYDTPIIRGRRVTVFGGGN EEECCCCCHHHHCCCCCCCCCEEECCHHHHEEECCCEECCCCCCCCEECCCEEEEEECCC VAMDAARTALRLGADSVHIVYRRTVAEMPARHEEVEHAMEEGVKMQELCAPIAFVPDAEG EEHHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCEEECCCCHH CLSGVRLQQMQLGEPDQSGRRRPVPVEGSELLLPTDLAVIAVGTRSNPVLLEAEPELDLN HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEEECCCCCCC RWGYISINSDTGETSIPDVFAGGDIVTGAATVILAMGAGRTAAKEIARRLGCQPDD CEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKASKKPVRPRVPMPVQPPEERIRNFDEVATGYTLEMAAEEAARCLQCKKPKCVKGCPVE CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC VPIPQFIAHLAAGDIDAAYRTLKSTNSLPAVCGRVCPQEVQCEGECILTAKGQPVAIGRL CCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCEEEEECCCCEEHHHH ERFVADEYMHRDACGLISGKPECPLIDPHKKVACIGSGPASLTAAGYLAARGCKVTVFEA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEHHHHH LHELGGVLVYGIPEFRLPKEKIVAKEVNALRELEVDFVRNRVGGKTFSIGELFAQGYRAV HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEE FIGVGAGLPRFLGIPGENLNGVFSANEYLTRVNLGRAYSFPDYDTPIIRGRRVTVFGGGN EEECCCCCHHHHCCCCCCCCCEEECCHHHHEEECCCEECCCCCCCCEECCCEEEEEECCC VAMDAARTALRLGADSVHIVYRRTVAEMPARHEEVEHAMEEGVKMQELCAPIAFVPDAEG EEHHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCEEECCCCHH CLSGVRLQQMQLGEPDQSGRRRPVPVEGSELLLPTDLAVIAVGTRSNPVLLEAEPELDLN HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEEECCCCCCC RWGYISINSDTGETSIPDVFAGGDIVTGAATVILAMGAGRTAAKEIARRLGCQPDD CEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]