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The map label for this gene is spsC [H]

Identifier: 78356178

GI number: 78356178

Start: 1160194

End: 1161354

Strand: Reverse

Name: spsC [H]

Synonym: Dde_1131

Alternate gene names: 78356178

Gene position: 1161354-1160194 (Counterclockwise)

Preceding gene: 78356179

Following gene: 78356177

Centisome position: 31.13

GC content: 59.43

Gene sequence:

>1161_bases
ATGCGTGAGTCCTTTCTGGTTTTCGGACAGCCCCTTATCGAACAGGACGAAATAGACGAAGTCGTGGACTCCATGCACAA
GGCATGGATCGGCACCGGTCCCAAGGTGCATCAGTTTGAACGCGATTTCGCCGCATACAAGGGCGTGGCGCATGCCGCCG
CCGTCAACTCGTGCACGGCAGCCCTGCACCTTGCCTGTCTTACACTCGACCTTGCACCCGGCGACGAGGTGATAACCACC
GCCATGACCTTCTGCGCGTCGGTCAATGCCATCATCCATGCCGGCGGTACTCCCGTGCTGGCTGATGCAGACCCCGTCAC
GCTTAATATTTCGGCCGAAACCATAGCCCCGCACATCGGCCCGCGCACCCGCGCCATCATGGTGGTGCACTACGCAGGAC
GCTGCTGCGATATGGACCCCATAATGGAGCTGGCCCGCAAACACGGTCTGATTGTCATCGAAGACTGCGCCCACGCCATT
GAAAGCGAATACAAAGGGCGCAAAGCCGGCACCATAGGGCACATAGGCTGCTTCAGCTTTTACGCCACCAAAAACATCGT
CACCGGCGAAGGCGGCATGATCATTTCTGACGACAAAGCCGCCATAGACCGCTGCAAAATAATGGCACTGCACGGCATGA
GCGCCGACGCATGGGCCAGATTCAGCGATGCGGGCTACAAGCACTATCAGGTTGTTGATCACGGCTTTAAGTACAACATG
ATGGATATTCAGGCGGCCATGGGCATCCATCAGCTGCGGCGCGTGGAAGAATACTGGAAACGCCGCGCCTGCATATGGCA
GAAGTACAATGAAGGACTGGCCGGACTTGGCATGGGCCTGCCCGCCGACGCCGAGGAACATACCCGCCATGCGTACCACC
TGTACACCATACGGGTGTCGGCCGCGTGCTGCGGCGTGGAACGCGACGCCATGCTTGAAGCGCTGAGGGCGCACAACATA
GGCGTGGGCGTACACTATCTGGCAGTTCCCGAACACCCCTACTACCGGCGCCGTTTCGGCTGGGACCCGGCAGACACTCC
GGTGGCCACAGCTTACGGGCGCGAGACTGTCAGCCTGCCCCTTTCCCCCAAACTGTCAGACGGTGATGTGGACGATGTCA
TAGAAGCCATCCGCGCCATCTGCACGGAATCTGCCAGATGA

Upstream 100 bases:

>100_bases
CGCATGACTGCACGCGGCCCCGTGGCAACAGGCAAAAAAACATCAACCCCGCGGCAGATTTCGGGCGTTTTCACCCCCAA
CGTAACGGAGCCCGCTTACA

Downstream 100 bases:

>100_bases
AATCCGGAATAACGGGGCTGGTACTCACATATAACGGCGGGCGTCTGCTGGACAAATGTCTGGCGTCGCTCGCATTTTGT
GACCGGGTGCTGGTGGTGGA

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MRESFLVFGQPLIEQDEIDEVVDSMHKAWIGTGPKVHQFERDFAAYKGVAHAAAVNSCTAALHLACLTLDLAPGDEVITT
AMTFCASVNAIIHAGGTPVLADADPVTLNISAETIAPHIGPRTRAIMVVHYAGRCCDMDPIMELARKHGLIVIEDCAHAI
ESEYKGRKAGTIGHIGCFSFYATKNIVTGEGGMIISDDKAAIDRCKIMALHGMSADAWARFSDAGYKHYQVVDHGFKYNM
MDIQAAMGIHQLRRVEEYWKRRACIWQKYNEGLAGLGMGLPADAEEHTRHAYHLYTIRVSAACCGVERDAMLEALRAHNI
GVGVHYLAVPEHPYYRRRFGWDPADTPVATAYGRETVSLPLSPKLSDGDVDDVIEAIRAICTESAR

Sequences:

>Translated_386_residues
MRESFLVFGQPLIEQDEIDEVVDSMHKAWIGTGPKVHQFERDFAAYKGVAHAAAVNSCTAALHLACLTLDLAPGDEVITT
AMTFCASVNAIIHAGGTPVLADADPVTLNISAETIAPHIGPRTRAIMVVHYAGRCCDMDPIMELARKHGLIVIEDCAHAI
ESEYKGRKAGTIGHIGCFSFYATKNIVTGEGGMIISDDKAAIDRCKIMALHGMSADAWARFSDAGYKHYQVVDHGFKYNM
MDIQAAMGIHQLRRVEEYWKRRACIWQKYNEGLAGLGMGLPADAEEHTRHAYHLYTIRVSAACCGVERDAMLEALRAHNI
GVGVHYLAVPEHPYYRRRFGWDPADTPVATAYGRETVSLPLSPKLSDGDVDDVIEAIRAICTESAR
>Mature_386_residues
MRESFLVFGQPLIEQDEIDEVVDSMHKAWIGTGPKVHQFERDFAAYKGVAHAAAVNSCTAALHLACLTLDLAPGDEVITT
AMTFCASVNAIIHAGGTPVLADADPVTLNISAETIAPHIGPRTRAIMVVHYAGRCCDMDPIMELARKHGLIVIEDCAHAI
ESEYKGRKAGTIGHIGCFSFYATKNIVTGEGGMIISDDKAAIDRCKIMALHGMSADAWARFSDAGYKHYQVVDHGFKYNM
MDIQAAMGIHQLRRVEEYWKRRACIWQKYNEGLAGLGMGLPADAEEHTRHAYHLYTIRVSAACCGVERDAMLEALRAHNI
GVGVHYLAVPEHPYYRRRFGWDPADTPVATAYGRETVSLPLSPKLSDGDVDDVIEAIRAICTESAR

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=379, Percent_Identity=39.3139841688654, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI2367285, Length=376, Percent_Identity=34.5744680851064, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42341; Mature: 42341

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESFLVFGQPLIEQDEIDEVVDSMHKAWIGTGPKVHQFERDFAAYKGVAHAAAVNSCTA
CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALHLACLTLDLAPGDEVITTAMTFCASVNAIIHAGGTPVLADADPVTLNISAETIAPHIG
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEEHHHHCCCCC
PRTRAIMVVHYAGRCCDMDPIMELARKHGLIVIEDCAHAIESEYKGRKAGTIGHIGCFSF
CCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHH
YATKNIVTGEGGMIISDDKAAIDRCKIMALHGMSADAWARFSDAGYKHYQVVDHGFKYNM
HHHCCEEECCCCEEEECCHHHHHHEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEECH
MDIQAAMGIHQLRRVEEYWKRRACIWQKYNEGLAGLGMGLPADAEEHTRHAYHLYTIRVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHCCEEEEEEEEEEE
AACCGVERDAMLEALRAHNIGVGVHYLAVPEHPYYRRRFGWDPADTPVATAYGRETVSLP
HHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEECCCCCEEECC
LSPKLSDGDVDDVIEAIRAICTESAR
CCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRESFLVFGQPLIEQDEIDEVVDSMHKAWIGTGPKVHQFERDFAAYKGVAHAAAVNSCTA
CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALHLACLTLDLAPGDEVITTAMTFCASVNAIIHAGGTPVLADADPVTLNISAETIAPHIG
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEEHHHHCCCCC
PRTRAIMVVHYAGRCCDMDPIMELARKHGLIVIEDCAHAIESEYKGRKAGTIGHIGCFSF
CCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHH
YATKNIVTGEGGMIISDDKAAIDRCKIMALHGMSADAWARFSDAGYKHYQVVDHGFKYNM
HHHCCEEECCCCEEEECCHHHHHHEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEECH
MDIQAAMGIHQLRRVEEYWKRRACIWQKYNEGLAGLGMGLPADAEEHTRHAYHLYTIRVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHCCEEEEEEEEEEE
AACCGVERDAMLEALRAHNIGVGVHYLAVPEHPYYRRRFGWDPADTPVATAYGRETVSLP
HHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEECCCCCEEECC
LSPKLSDGDVDDVIEAIRAICTESAR
CCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]