Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is waaE [H]

Identifier: 78356177

GI number: 78356177

Start: 1159427

End: 1160197

Strand: Reverse

Name: waaE [H]

Synonym: Dde_1130

Alternate gene names: 78356177

Gene position: 1160197-1159427 (Counterclockwise)

Preceding gene: 78356178

Following gene: 78356176

Centisome position: 31.1

GC content: 56.16

Gene sequence:

>771_bases
ATGAAATCCGGAATAACGGGGCTGGTACTCACATATAACGGCGGGCGTCTGCTGGACAAATGTCTGGCGTCGCTCGCATT
TTGTGACCGGGTGCTGGTGGTGGATTCATTTTCTACAGACAGCACGGTGGAGATAGCCCGCAACCGCGGCGCCGATGTGC
TGCAAAACCCATGGCACGGCCCTGCGGCACAATTCGAGTTTGCCCTGGCGCAGATTGATACGGAATGGGTCGTAAGCCTT
GATCAGGATGAAATATGCACCCCCGCCCTGAGTCAGGCGGTGCAGAAAACCGTACGCACCGCTCCGGCCGGTCTTGCCGG
CTGCTATCCGCGCCGCCGCAACTGGTACCACGACCGTTTCATGAAGCACTCCGGCTGGTATCCCGACAGGTTGTTGCGGG
TGTTTCGTCCGGCACTCATGCAGGTACATGTAAGCGGTGCCCATTATTCTTTTCACCCGCAGGGCCCCACACAGAACATC
GACGCGGATATACTGCATTATCCGTACGAAAGTTTTTTTCAGCATCTGGAAAAAATCAACGCCTATGCCCAGCAGGGAGC
CGATGACCTGCGGCGCAAAGGCAAAAAAGGTGGTATAGCAGCGGGTATGGCACATGGCTTTGCCCGTTTTTTCAAGCTGT
ATGTCATCCAGCGGGGCATGCTGGACGGACGTGCAGGCTTTATAAATGCAACGCACGGCGCGTTTTACGCATACCTGAAG
TACGTCCGCGTACAGGAAGGCGACTGGGGAGCGCCGTACGATCATTCATGA

Upstream 100 bases:

>100_bases
GGCGCGAGACTGTCAGCCTGCCCCTTTCCCCCAAACTGTCAGACGGTGATGTGGACGATGTCATAGAAGCCATCCGCGCC
ATCTGCACGGAATCTGCCAG

Downstream 100 bases:

>100_bases
ACACCGCAGAAAACAGCGGTCCGCCCCGGACCGGCCAAGCATAACACTATTGAGGAAAGACAACGATGAGCGAACTGAAA
TACAAGCGCGCGCTGATCAA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHGPAAQFEFALAQIDTEWVVSL
DQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRFMKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNI
DADILHYPYESFFQHLEKINAYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK
YVRVQEGDWGAPYDHS

Sequences:

>Translated_256_residues
MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHGPAAQFEFALAQIDTEWVVSL
DQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRFMKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNI
DADILHYPYESFFQHLEKINAYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK
YVRVQEGDWGAPYDHS
>Mature_256_residues
MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHGPAAQFEFALAQIDTEWVVSL
DQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRFMKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNI
DADILHYPYESFFQHLEKINAYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK
YVRVQEGDWGAPYDHS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 28775; Mature: 28775

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHHHCCCCCC
PAAQFEFALAQIDTEWVVSLDQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRF
CHHHHHHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHCCHHHHHH
MKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNIDADILHYPYESFFQHLEKIN
HHCCCCCHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHH
AYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK
HHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH
YVRVQEGDWGAPYDHS
HHHEECCCCCCCCCCC
>Mature Secondary Structure
MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHHHCCCCCC
PAAQFEFALAQIDTEWVVSLDQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRF
CHHHHHHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHCCHHHHHH
MKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNIDADILHYPYESFFQHLEKIN
HHCCCCCHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHH
AYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK
HHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH
YVRVQEGDWGAPYDHS
HHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11371519 [H]