| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is waaE [H]
Identifier: 78356177
GI number: 78356177
Start: 1159427
End: 1160197
Strand: Reverse
Name: waaE [H]
Synonym: Dde_1130
Alternate gene names: 78356177
Gene position: 1160197-1159427 (Counterclockwise)
Preceding gene: 78356178
Following gene: 78356176
Centisome position: 31.1
GC content: 56.16
Gene sequence:
>771_bases ATGAAATCCGGAATAACGGGGCTGGTACTCACATATAACGGCGGGCGTCTGCTGGACAAATGTCTGGCGTCGCTCGCATT TTGTGACCGGGTGCTGGTGGTGGATTCATTTTCTACAGACAGCACGGTGGAGATAGCCCGCAACCGCGGCGCCGATGTGC TGCAAAACCCATGGCACGGCCCTGCGGCACAATTCGAGTTTGCCCTGGCGCAGATTGATACGGAATGGGTCGTAAGCCTT GATCAGGATGAAATATGCACCCCCGCCCTGAGTCAGGCGGTGCAGAAAACCGTACGCACCGCTCCGGCCGGTCTTGCCGG CTGCTATCCGCGCCGCCGCAACTGGTACCACGACCGTTTCATGAAGCACTCCGGCTGGTATCCCGACAGGTTGTTGCGGG TGTTTCGTCCGGCACTCATGCAGGTACATGTAAGCGGTGCCCATTATTCTTTTCACCCGCAGGGCCCCACACAGAACATC GACGCGGATATACTGCATTATCCGTACGAAAGTTTTTTTCAGCATCTGGAAAAAATCAACGCCTATGCCCAGCAGGGAGC CGATGACCTGCGGCGCAAAGGCAAAAAAGGTGGTATAGCAGCGGGTATGGCACATGGCTTTGCCCGTTTTTTCAAGCTGT ATGTCATCCAGCGGGGCATGCTGGACGGACGTGCAGGCTTTATAAATGCAACGCACGGCGCGTTTTACGCATACCTGAAG TACGTCCGCGTACAGGAAGGCGACTGGGGAGCGCCGTACGATCATTCATGA
Upstream 100 bases:
>100_bases GGCGCGAGACTGTCAGCCTGCCCCTTTCCCCCAAACTGTCAGACGGTGATGTGGACGATGTCATAGAAGCCATCCGCGCC ATCTGCACGGAATCTGCCAG
Downstream 100 bases:
>100_bases ACACCGCAGAAAACAGCGGTCCGCCCCGGACCGGCCAAGCATAACACTATTGAGGAAAGACAACGATGAGCGAACTGAAA TACAAGCGCGCGCTGATCAA
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHGPAAQFEFALAQIDTEWVVSL DQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRFMKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNI DADILHYPYESFFQHLEKINAYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK YVRVQEGDWGAPYDHS
Sequences:
>Translated_256_residues MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHGPAAQFEFALAQIDTEWVVSL DQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRFMKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNI DADILHYPYESFFQHLEKINAYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK YVRVQEGDWGAPYDHS >Mature_256_residues MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHGPAAQFEFALAQIDTEWVVSL DQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRFMKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNI DADILHYPYESFFQHLEKINAYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK YVRVQEGDWGAPYDHS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28775; Mature: 28775
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHG CCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHHHCCCCCC PAAQFEFALAQIDTEWVVSLDQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRF CHHHHHHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHCCHHHHHH MKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNIDADILHYPYESFFQHLEKIN HHCCCCCHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHH AYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK HHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH YVRVQEGDWGAPYDHS HHHEECCCCCCCCCCC >Mature Secondary Structure MKSGITGLVLTYNGGRLLDKCLASLAFCDRVLVVDSFSTDSTVEIARNRGADVLQNPWHG CCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHHHCCCCCC PAAQFEFALAQIDTEWVVSLDQDEICTPALSQAVQKTVRTAPAGLAGCYPRRRNWYHDRF CHHHHHHHHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHCCHHHHHH MKHSGWYPDRLLRVFRPALMQVHVSGAHYSFHPQGPTQNIDADILHYPYESFFQHLEKIN HHCCCCCHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHH AYAQQGADDLRRKGKKGGIAAGMAHGFARFFKLYVIQRGMLDGRAGFINATHGAFYAYLK HHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHH YVRVQEGDWGAPYDHS HHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11371519 [H]