Click here to switch to the map view.

The map label for this gene is btrV [H]

Identifier: 78355767

GI number: 78355767

Start: 739005

End: 739337

Strand: Reverse

Name: btrV [H]

Synonym: Dde_0720

Alternate gene names: 78355767

Gene position: 739337-739005 (Counterclockwise)

Preceding gene: 78355768

Following gene: 78355759

Centisome position: 19.82

GC content: 54.95

Gene sequence:

>333_bases
ATGACGCTGACCACCATTACGCACGATAACGTGACGATTCTGGAAATGCGTGAACGGCTGGACGGACAAGGTACGCAGCA
GCTGGAAAAAACCGTTGAAGAACTGCTTTCCGCCGGGGCCAGAACCCTGCTCTTTGATTTTCAGGATCTGGACTATATTA
ACAGCTCGGGCCTGCGTGTGCTGGTGATGGCCTATCAGCGCCTGCACCCGGCAGGCGGAACAGTGACCATATGCTGCGCA
CGCGACTATATTCAGGAAGTGTTCGAGATATCGGGCTACGACAAGCTGTTCGGCATGTATGAAACCCGTGATGCCGCCCT
AGGCTCGCTGTAG

Upstream 100 bases:

>100_bases
TGGATGATTTCCGCTATACACGAAAAAAAGATAACAACATCATAGTGCTGGGAAAACGGCTCGACAACGGGTCAAAGCAT
GACGATGAAAGGAGCCACGC

Downstream 100 bases:

>100_bases
GACGCCACGCTTCTGCCACACCGGTGTCAACGTGCTGCCAATATCTGCCGAAATGCTGCCCGATTGCCTTCGGATTGCTT
TCGGATACCGGAACAGGCCG

Product: anti-anti-sigma regulatory factor, SpoIIAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTLTTITHDNVTILEMRERLDGQGTQQLEKTVEELLSAGARTLLFDFQDLDYINSSGLRVLVMAYQRLHPAGGTVTICCA
RDYIQEVFEISGYDKLFGMYETRDAALGSL

Sequences:

>Translated_110_residues
MTLTTITHDNVTILEMRERLDGQGTQQLEKTVEELLSAGARTLLFDFQDLDYINSSGLRVLVMAYQRLHPAGGTVTICCA
RDYIQEVFEISGYDKLFGMYETRDAALGSL
>Mature_109_residues
TLTTITHDNVTILEMRERLDGQGTQQLEKTVEELLSAGARTLLFDFQDLDYINSSGLRVLVMAYQRLHPAGGTVTICCAR
DYIQEVFEISGYDKLFGMYETRDAALGSL

Specific function: Possible positive regulator of sigma-B activity. Non-phosphorylated BtrV binds to BtrW, preventing its association with an unknown partner(s) that might be sigma-B. When phosphorylated, releases BtrW, which is then free to complex with and inactivate its

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 12355; Mature: 12224

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTTITHDNVTILEMRERLDGQGTQQLEKTVEELLSAGARTLLFDFQDLDYINSSGLRV
CEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCHH
LVMAYQRLHPAGGTVTICCARDYIQEVFEISGYDKLFGMYETRDAALGSL
HHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
TLTTITHDNVTILEMRERLDGQGTQQLEKTVEELLSAGARTLLFDFQDLDYINSSGLRV
EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCHH
LVMAYQRLHPAGGTVTICCARDYIQEVFEISGYDKLFGMYETRDAALGSL
HHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]