Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355676

Identifier: 78355676

GI number: 78355676

Start: 648049

End: 650052

Strand: Reverse

Name: 78355676

Synonym: Dde_0629

Alternate gene names: NA

Gene position: 650052-648049 (Counterclockwise)

Preceding gene: 78355677

Following gene: 78355675

Centisome position: 17.43

GC content: 62.33

Gene sequence:

>2004_bases
ATGACACAAGGCAACCCCGCCCGCCAGCCCGGACTGGTACGCACGTTTCTGCAACGCACCCTGCCTTTCAGCGAACTGCC
AGCAGACAGCCTGCGCCGCCTTGCAGAAGTCTGCACGGTGGAGTTTGTTCCGGAAGGTACGGCACTGCCGCACAGCGCGC
AGCGCCCCGAGGCCCTGCGCGTAGTGCAGCAGGGTGCCGTGCGGCTGACAGTTGCGCAGGAAGACGGCAGCCCTGCGCTG
CAGGACACCAGAGGCGAAGGCGACATCATCGGGGCCGCCGCGCTGCTGGGGCGCAGCACTGCTTCAGTACATGCAACAAC
ACTGGAGGATACTTTTTTCATCCGCATACCGGGAAAAACATTTCTCGGACTTGCTTCGGAATTTCCTGCCGTAGAACGTT
ATTTCATGCGCACTCTGCCGGAAGAGTACCTTACACGGGCCTTTGACGAAATGCGCCTGCGCTGCGAAGGAGCCTCCGGC
AGCGGAGGTCTGTATCTTTTTTCCGGTCTGGCGGGCGATCTGGTGCACAGACCGCCGGAAACGGTGGTGCGCGGCACCAC
CCTGCAGCAGGCCGCGTACCGCATGATGAAATCCGGCACAGGATCGCTGCTGGTCTGCGAAGCAGCTCCGCCGCACGGAG
AACCGGACGCGGCAGACATGCACCTGCACGCTGCGGTCCGGACTGCCGCACTCGGGGGCAGCCCCGCAGCAGGGCCGGTC
ATCGGCATCGTCACCGATAAAGATCTGCGCAATGCAGTGGCGCTGGGCATGGGTCACGAGGCTCCGGCGGAAACCGTCAT
GTCCGCTCCGGTGGCGGCTGTGGACGAAACCTGCACCTGTTTTGACGCGCTGCTCGAAATGATGCGCCGCCAGATTCATC
ACCTTGCCGTTTTGCGTGCGGGCAGGGTTGTCGGCGTCATCACGGCCCACGACATCATGGTCGTACAGGGACGCACGCCG
TTTTCACTCTTCCGCGAAATAATGCAGCAGCGCGATCTGCGCAGTCTGCACCCGCTGGGCCCGCGCGTGGCGCATGTTGT
GCGCGCCGTGGTCGAAGAAGGTGCCCGCGCGGCTGCGGCAGTACGCATGATAACAGTGTTCAACGACCTTTTTCTGGAAA
AGGTGCTCACCCTGCTGCAGGCCGAAACGGGTCCGCCGCCGGCAAAATTCAGCTGGATGCTGCTGGGCAGCGAAGGCCGC
AGAGAGCAGACCTTTGCCACCGATCAGGACAACGCCCTTGTACTGGAAGACTGCCCTGACGATATCATAGCGCGGGCTGC
ACAGGTGTACTTTGACGCTTTCTGCACGCGGGCCGTGGCAGAGCTGGAAGCATGCGGTTTCGCCCGATGCGCCGGAGGCA
TAATGGCTTCGGAGCCGGGCATGCGTCTGTCTGTTTCCGGCTGGCAGCGACGCTTTATCCGCTGGATACACACGCCGGAA
CCGCAGGAACTGCTCAAGTCGTCAATCTTTTTCGACTTCCGCCACGGGCATGGTCATGCCCCGCTGGTACGGCACCTGCG
TGAATCGGTGGCTGCCGCGGCGCAGGCCGATCAGGTCTTTCTGCGTCATCTGGCCGCAGACGCACTGCGCGACCGGCCGC
CCCTGTCTTTTTTCCGCAACCTTGTGGTCGAAAAAAGCGGAGACCACCGGAACATGCTGGATATCAAACGCCGCGGCATG
CTGCCTTTCGTCAATATTGCACGCCTGATGGCGCTGGCGCACGGCATTGACGAAACATCCACGCCGGACAGGCTGACGGC
GCTGGAACAGGAAGGTCACATGCCCGCCCAGCTGTGCCGCGAGGCGCGCGAAGGCTACGAGTTTCTCATGCATGTCCGGC
TGGTACACCAGCTGGGACAGATACGGCGCGGCGAACCCGCGGGAAATCATATTTCACCGGCCGAACTGACCGGACTGGAA
AAACGGACGCTCAAAGAGGTGTTTGCCGTAACCGAGCGGCTGCAGGCATTCACCCGGCAACGTTTCAAGCTGGATGTGTC
CTGA

Upstream 100 bases:

>100_bases
GACGGCATGGCGGACGGCGTCCTGCTAAACCGGCCCTGCGGGGGACGGCTGCAGGACACGCCCGGCCGTCCGCCGCTTTT
ACCGCTGCACAGGAGAAGCC

Downstream 100 bases:

>100_bases
AAGTTCTGTGCACGCAGCAGGCGTGTACAGCTATCCGGAGAAGTTATTATGGGAATACGCTCGTTATTGCGCAGCCTGCG
CCACAGACCGCCGCTGCATC

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; Signal Protein; CBS Domain Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; Cyclic-Nucleotide Signal Transduction Protein; DNA Polymerase III Subunit Epsilon; Multidomain-Containing Protein; CBS Signal-Transduction Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALRVVQQGAVRLTVAQEDGSPAL
QDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASG
SGGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV
IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRAGRVVGVITAHDIMVVQGRTP
FSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGR
REQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE
PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHRNMLDIKRRGM
LPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCREAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLE
KRTLKEVFAVTERLQAFTRQRFKLDVS

Sequences:

>Translated_667_residues
MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALRVVQQGAVRLTVAQEDGSPAL
QDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASG
SGGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV
IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRAGRVVGVITAHDIMVVQGRTP
FSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGR
REQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE
PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHRNMLDIKRRGM
LPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCREAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLE
KRTLKEVFAVTERLQAFTRQRFKLDVS
>Mature_666_residues
TQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALRVVQQGAVRLTVAQEDGSPALQ
DTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASGS
GGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPVI
GIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRAGRVVGVITAHDIMVVQGRTPF
SLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGRR
EQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPEP
QELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHRNMLDIKRRGML
PFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCREAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEK
RTLKEVFAVTERLQAFTRQRFKLDVS

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73221; Mature: 73090

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00527 RIBOSOMAL_S14

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALR
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH
VVQQGAVRLTVAQEDGSPALQDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKT
HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEEECCHH
FLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASGSGGLYLFSGLAGDLVHRPPE
HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCHHHHHCCCHH
TVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV
HHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE
IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRA
EEEEECHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRVVGVITAHDIMVVQGRTPFSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAA
CCEEEEEEECEEEEEECCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHH
VRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGRREQTFATDQDNALVLEDCPD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCH
DIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEECCCCCEEEHHHHHHHHHHHHCCCC
PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRN
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LVVEKSGDHRNMLDIKRRGMLPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCR
HHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH
EAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEKRTLKEVFAVTERLQAFTRQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RFKLDVS
HHEECCC
>Mature Secondary Structure 
TQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALR
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH
VVQQGAVRLTVAQEDGSPALQDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKT
HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEEECCHH
FLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASGSGGLYLFSGLAGDLVHRPPE
HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCHHHHHCCCHH
TVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV
HHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE
IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRA
EEEEECHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRVVGVITAHDIMVVQGRTPFSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAA
CCEEEEEEECEEEEEECCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHH
VRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGRREQTFATDQDNALVLEDCPD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCH
DIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEECCCCCEEEHHHHHHHHHHHHCCCC
PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRN
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LVVEKSGDHRNMLDIKRRGMLPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCR
HHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH
EAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEKRTLKEVFAVTERLQAFTRQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RFKLDVS
HHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA