| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355281
Identifier: 78355281
GI number: 78355281
Start: 218915
End: 219730
Strand: Reverse
Name: 78355281
Synonym: Dde_0234
Alternate gene names: NA
Gene position: 219730-218915 (Counterclockwise)
Preceding gene: 78355282
Following gene: 78355280
Centisome position: 5.89
GC content: 57.72
Gene sequence:
>816_bases ATGCGGAAGCTGTTACTTGTTCTGGCTCTTGTGATGAGCCTGACCGGCGTTGCGTACGCCGAAGCACCGGTTCTTATGAT GGCCACCACCACCAGCACCGACAACACCGGTCTGCTGGATGACCTTGCCCCCCAGTTTACCAAAGACACCGGCATTGAAC TGCGCTGGACAGCTGTGGGCACGGGCAAAGCCCTGAAAATGGGTGAAAACTGCGACGTGGACATTCTGCTGGTACACGCC CCCGCAGCGGAAAAAGCCTTTGTTGATGCCGGTTTCGGCACTGCACGCACCCAGCTTATGTACAACGATTTTGTCATCAT CGGCCCCGCCGCCGACCCCGCAGGGGTCAAAGGCATGACCGTGGCCGCGGCTCTGGGCAGGATAGCCGCGGATAATGCCG TATTTGTAAGCCGCGGCGACAACTCGGGCACCCACAAGATGGAAAAAAGCCTGTGGAAGCAGATCGAAGGCTCGTCCCCT GAAAAAGAAGCATGGTATGTGCAGACCGGACAGGGCATGCTGCGCACCATCAACGTGGCTGCCGAAAAAGGCGGGTACAC CATGACCGACCGCGGCACCTACATCAAATACGAAGCCTCCATGGACGGCAACCCGCCGCTGAAAATTCTGGTGGAAGGCG ACAAAATTCTCTTCAACCAGTACAGCGCCATTCCGGTCAACCCCGCCCATTGCCCCAAGGTGAAAAAAGACCTTGCAGAC AAGTTCGTCAACTGGATGGCCAGCCCCGCCACCCAGAAAACCATCGGCGACTTCAAGCTGATGGGCAAGGCGCTGTTCAC CCCCAACGCCGAATAA
Upstream 100 bases:
>100_bases GACATGGCGGTAGGTATTCAGGTAATAATTTCCGCATTGTGTTTTATTTAGCTGATTGCGTACCGGAACTGACGCAAACA AACCATGACGGAGGAAAGCG
Downstream 100 bases:
>100_bases TACCCAGCGGCCCGATTTATGCCGGACAACCGTCCGGCCACCGGCAGAGGGGCGACCCGTTCGCCCCTCTGTCATTACAG GTCAGTATACGTCAGTACAG
Product: ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Signal Peptide; TUNGstate Abc Transporter Permease; ABC-Type Transport Protein Permease Component; ABC Transporter; Periplasmic Protein; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRKLLLVLALVMSLTGVAYAEAPVLMMATTTSTDNTGLLDDLAPQFTKDTGIELRWTAVGTGKALKMGENCDVDILLVHA PAAEKAFVDAGFGTARTQLMYNDFVIIGPAADPAGVKGMTVAAALGRIAADNAVFVSRGDNSGTHKMEKSLWKQIEGSSP EKEAWYVQTGQGMLRTINVAAEKGGYTMTDRGTYIKYEASMDGNPPLKILVEGDKILFNQYSAIPVNPAHCPKVKKDLAD KFVNWMASPATQKTIGDFKLMGKALFTPNAE
Sequences:
>Translated_271_residues MRKLLLVLALVMSLTGVAYAEAPVLMMATTTSTDNTGLLDDLAPQFTKDTGIELRWTAVGTGKALKMGENCDVDILLVHA PAAEKAFVDAGFGTARTQLMYNDFVIIGPAADPAGVKGMTVAAALGRIAADNAVFVSRGDNSGTHKMEKSLWKQIEGSSP EKEAWYVQTGQGMLRTINVAAEKGGYTMTDRGTYIKYEASMDGNPPLKILVEGDKILFNQYSAIPVNPAHCPKVKKDLAD KFVNWMASPATQKTIGDFKLMGKALFTPNAE >Mature_271_residues MRKLLLVLALVMSLTGVAYAEAPVLMMATTTSTDNTGLLDDLAPQFTKDTGIELRWTAVGTGKALKMGENCDVDILLVHA PAAEKAFVDAGFGTARTQLMYNDFVIIGPAADPAGVKGMTVAAALGRIAADNAVFVSRGDNSGTHKMEKSLWKQIEGSSP EKEAWYVQTGQGMLRTINVAAEKGGYTMTDRGTYIKYEASMDGNPPLKILVEGDKILFNQYSAIPVNPAHCPKVKKDLAD KFVNWMASPATQKTIGDFKLMGKALFTPNAE
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29097; Mature: 29097
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLLVLALVMSLTGVAYAEAPVLMMATTTSTDNTGLLDDLAPQFTKDTGIELRWTAVG CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHCHHHCCCCCCEEEEEEEC TGKALKMGENCDVDILLVHAPAAEKAFVDAGFGTARTQLMYNDFVIIGPAADPAGVKGMT CCCEEECCCCCCEEEEEEECCCCCCCEEECCCCCHHEEEEECCEEEEECCCCCCCCCHHH VAAALGRIAADNAVFVSRGDNSGTHKMEKSLWKQIEGSSPEKEAWYVQTGQGMLRTINVA HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEE AEKGGYTMTDRGTYIKYEASMDGNPPLKILVEGDKILFNQYSAIPVNPAHCPKVKKDLAD ECCCCEEEECCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHH KFVNWMASPATQKTIGDFKLMGKALFTPNAE HHHHHHCCCCCHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure MRKLLLVLALVMSLTGVAYAEAPVLMMATTTSTDNTGLLDDLAPQFTKDTGIELRWTAVG CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHCHHHCCCCCCEEEEEEEC TGKALKMGENCDVDILLVHAPAAEKAFVDAGFGTARTQLMYNDFVIIGPAADPAGVKGMT CCCEEECCCCCCEEEEEEECCCCCCCEEECCCCCHHEEEEECCEEEEECCCCCCCCCHHH VAAALGRIAADNAVFVSRGDNSGTHKMEKSLWKQIEGSSPEKEAWYVQTGQGMLRTINVA HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEE AEKGGYTMTDRGTYIKYEASMDGNPPLKILVEGDKILFNQYSAIPVNPAHCPKVKKDLAD ECCCCEEEECCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHH KFVNWMASPATQKTIGDFKLMGKALFTPNAE HHHHHHCCCCCHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA