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The map label for this gene is rrf2 [H]

Identifier: 78355282

GI number: 78355282

Start: 219976

End: 220638

Strand: Reverse

Name: rrf2 [H]

Synonym: Dde_0235

Alternate gene names: 78355282

Gene position: 220638-219976 (Counterclockwise)

Preceding gene: 78355284

Following gene: 78355281

Centisome position: 5.91

GC content: 58.22

Gene sequence:

>663_bases
ATGCTGACAAGCCGCCGGATACGGCTTACACTCCCGGTAAACGGTGCCCGACCGGACGCAAGTCGGGCTTTGTTGACGTG
CCGCGCACCCGGCGGGTATCCGTCGCGTTCAGGCGCCTTACTCCATTATTTTCCAACATCCCATTTTGCAGATATGAAGC
TTTCAGCCCGCACCCGCTATGCAGCCAGACTGCTGCTGGATCTGGCCCAGCACGCCACGGACGCACCCCGTACCGCGTCT
GCTCTTTCCGAACAGACAGGGGTTTCCGTTCAATTCATCGAACAGATCATCAAACCGCTCAAAAAAGCAAAACTTATCAA
CAGCGTCCGGGGGGCTGCAGGCGGGCATATGCTTAGCCGCGCGCCCTCTGAAATAACACTGGCCCAGATAGTCGATGTGA
TGGAAGGCGGCATACGCCTGACAGACTGCTGCACCGACAACGAGCTGTGTACACGCACGCCCACCTGCAAAACGCGGGTG
GCGTGGCTGCGCATTTCCGAGGTTCTTGAACGCGAGCTAAACTCCATCACTCTGGAAGACCTCATGTCCGGCGAACACCT
GTTCAATATCTGCGGTTCTGACGAAGGGCTGGATGTCCGGCTGGAAGACCTGCCCGAACAGGAAGAATCGGAAGACTGCG
GCGTTTGCGGCGGCGGCATCTGA

Upstream 100 bases:

>100_bases
GCTGCCCCAGCATACACCACATCGCACGCCGCCGACAGCGGGCATGATGCATTATCGCGGCATCATGCCGCCGCCCGCAT
GAAAAACTCTTTCCGGCTTC

Downstream 100 bases:

>100_bases
CCCTGCGGCACCATCAGCGCCCCCCCAAAAAAGCTCAGGCCGCCCGTAGAGGGCGGCTTTTTTCATGCGCTGCCGCACAG
CGCCCGACACGTCGCGAAGG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLTSRRIRLTLPVNGARPDASRALLTCRAPGGYPSRSGALLHYFPTSHFADMKLSARTRYAARLLLDLAQHATDAPRTAS
ALSEQTGVSVQFIEQIIKPLKKAKLINSVRGAAGGHMLSRAPSEITLAQIVDVMEGGIRLTDCCTDNELCTRTPTCKTRV
AWLRISEVLERELNSITLEDLMSGEHLFNICGSDEGLDVRLEDLPEQEESEDCGVCGGGI

Sequences:

>Translated_220_residues
MLTSRRIRLTLPVNGARPDASRALLTCRAPGGYPSRSGALLHYFPTSHFADMKLSARTRYAARLLLDLAQHATDAPRTAS
ALSEQTGVSVQFIEQIIKPLKKAKLINSVRGAAGGHMLSRAPSEITLAQIVDVMEGGIRLTDCCTDNELCTRTPTCKTRV
AWLRISEVLERELNSITLEDLMSGEHLFNICGSDEGLDVRLEDLPEQEESEDCGVCGGGI
>Mature_220_residues
MLTSRRIRLTLPVNGARPDASRALLTCRAPGGYPSRSGALLHYFPTSHFADMKLSARTRYAARLLLDLAQHATDAPRTAS
ALSEQTGVSVQFIEQIIKPLKKAKLINSVRGAAGGHMLSRAPSEITLAQIVDVMEGGIRLTDCCTDNELCTRTPTCKTRV
AWLRISEVLERELNSITLEDLMSGEHLFNICGSDEGLDVRLEDLPEQEESEDCGVCGGGI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=141, Percent_Identity=29.7872340425532, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 23951; Mature: 23951

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSRRIRLTLPVNGARPDASRALLTCRAPGGYPSRSGALLHYFPTSHFADMKLSARTRY
CCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
AARLLLDLAQHATDAPRTASALSEQTGVSVQFIEQIIKPLKKAKLINSVRGAAGGHMLSR
HHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
APSEITLAQIVDVMEGGIRLTDCCTDNELCTRTPTCKTRVAWLRISEVLERELNSITLED
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEHHH
LMSGEHLFNICGSDEGLDVRLEDLPEQEESEDCGVCGGGI
HHCCCCEEHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTSRRIRLTLPVNGARPDASRALLTCRAPGGYPSRSGALLHYFPTSHFADMKLSARTRY
CCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
AARLLLDLAQHATDAPRTASALSEQTGVSVQFIEQIIKPLKKAKLINSVRGAAGGHMLSR
HHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
APSEITLAQIVDVMEGGIRLTDCCTDNELCTRTPTCKTRVAWLRISEVLERELNSITLED
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEHHH
LMSGEHLFNICGSDEGLDVRLEDLPEQEESEDCGVCGGGI
HHCCCCEEHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]