| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355085
Identifier: 78355085
GI number: 78355085
Start: 30558
End: 31454
Strand: Reverse
Name: 78355085
Synonym: Dde_0038
Alternate gene names: NA
Gene position: 31454-30558 (Counterclockwise)
Preceding gene: 78355086
Following gene: 78355084
Centisome position: 0.84
GC content: 62.99
Gene sequence:
>897_bases TTGGCTGTTGCAAATGTAGCCATCCGCGAAGACCTGCGCCCGTGGTATCAGGCCGGTGTACAGCATCTTTTTATGGATGA TGCGGTAACCGCATGGATAGAGCAGGGCAGGCGGGAACAGCAGACAGCCGCCCCGCAGGCTTCTGCCCTTGCGCAGGCGC CTGCTGCGGGCCGTCCGGTGCACTCTTCGGGCTTATCCGCCGCAGAGGCGACAACGCCGGAAACGCCTGCACGCAGTATC CGGCGGCAAGCCCCGCGCGCAGAAAAAACACCGGTGCAGGCTTCCTCAGGCAATCATTCAGCCTTCGGACAGTCCGGGCG GGCTTCCGCTCCTGTGCGCCCTGTAACGCACGAGGCTCCTGCAGCCTGCACCATGCAGGAAGACACTCCGCCGCCCCCGC AGGCCAGCAGCATGCCCCCCGAACAGTGGCCGCCACAATGGCAGGCCGCATGGAGCAAAATTCCCGGTCCCGCACCTGTG GTATGGACTTACTGGTCGCTGGGCGACGACCTGTGCGGTAATGCCAATGCAGAACGCGGCGCGTTGCTGCGTAAAATCAT AGGAAGCCTAAGGCTGCCGCGCGGGACCAGTGCCTTCTGGCCCGTGGCTCTGCCCGCCGCACCCGCGCCCGACGAACATG CCGCCCCCCTGCAGGCCAATCCCGAAATTTTTCTGGCCGGCATAAACAGAATACGCCCGCGAAGGGTGTTCGCCTTCGGC AGCAGGGCTCTGCGGTCATTTGCCCCCCATTGCGGTCTGCGTCCGTATCAGTTTGTACACTATAACGGCTTCAGGCTGTA TGCCATGCCCGACATCGACTACCTGCTTGAGTCGCCTGCACCGGTGGAAGCCGTCATTTCCTGTCTCAAGGTCGCCCTGC AGAAAGTTTCCCGCTGA
Upstream 100 bases:
>100_bases TTCAATCGGCCACCAACAAAGTTTTTGTGGCTGACAAAACAGGCCGGACCGAAGAATGGCCCGTACAGCCCAAAACCGAA GTGGCATGGAGGATTCTGGA
Downstream 100 bases:
>100_bases ATCCCGAAGCCGGCCCGCCGTCATGTACGGGGCCGGCTTTTTCTTTCAGTCTGTTCGTATTACGCACTGTCTTCATTTCA GAACACAACATCATTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAVANVAIREDLRPWYQAGVQHLFMDDAVTAWIEQGRREQQTAAPQASALAQAPAAGRPVHSSGLSAAEATTPETPARSI RRQAPRAEKTPVQASSGNHSAFGQSGRASAPVRPVTHEAPAACTMQEDTPPPPQASSMPPEQWPPQWQAAWSKIPGPAPV VWTYWSLGDDLCGNANAERGALLRKIIGSLRLPRGTSAFWPVALPAAPAPDEHAAPLQANPEIFLAGINRIRPRRVFAFG SRALRSFAPHCGLRPYQFVHYNGFRLYAMPDIDYLLESPAPVEAVISCLKVALQKVSR
Sequences:
>Translated_298_residues MAVANVAIREDLRPWYQAGVQHLFMDDAVTAWIEQGRREQQTAAPQASALAQAPAAGRPVHSSGLSAAEATTPETPARSI RRQAPRAEKTPVQASSGNHSAFGQSGRASAPVRPVTHEAPAACTMQEDTPPPPQASSMPPEQWPPQWQAAWSKIPGPAPV VWTYWSLGDDLCGNANAERGALLRKIIGSLRLPRGTSAFWPVALPAAPAPDEHAAPLQANPEIFLAGINRIRPRRVFAFG SRALRSFAPHCGLRPYQFVHYNGFRLYAMPDIDYLLESPAPVEAVISCLKVALQKVSR >Mature_297_residues AVANVAIREDLRPWYQAGVQHLFMDDAVTAWIEQGRREQQTAAPQASALAQAPAAGRPVHSSGLSAAEATTPETPARSIR RQAPRAEKTPVQASSGNHSAFGQSGRASAPVRPVTHEAPAACTMQEDTPPPPQASSMPPEQWPPQWQAAWSKIPGPAPVV WTYWSLGDDLCGNANAERGALLRKIIGSLRLPRGTSAFWPVALPAAPAPDEHAAPLQANPEIFLAGINRIRPRRVFAFGS RALRSFAPHCGLRPYQFVHYNGFRLYAMPDIDYLLESPAPVEAVISCLKVALQKVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32235; Mature: 32104
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVANVAIREDLRPWYQAGVQHLFMDDAVTAWIEQGRREQQTAAPQASALAQAPAAGRPV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCC HSSGLSAAEATTPETPARSIRRQAPRAEKTPVQASSGNHSAFGQSGRASAPVRPVTHEAP CCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AACTMQEDTPPPPQASSMPPEQWPPQWQAAWSKIPGPAPVVWTYWSLGDDLCGNANAERG CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHCCCHHCCCCCCHHH ALLRKIIGSLRLPRGTSAFWPVALPAAPAPDEHAAPLQANPEIFLAGINRIRPRRVFAFG HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECHHHCCCHHHHHHH SRALRSFAPHCGLRPYQFVHYNGFRLYAMPDIDYLLESPAPVEAVISCLKVALQKVSR HHHHHHHCCCCCCCCEEEEEECCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVANVAIREDLRPWYQAGVQHLFMDDAVTAWIEQGRREQQTAAPQASALAQAPAAGRPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCC HSSGLSAAEATTPETPARSIRRQAPRAEKTPVQASSGNHSAFGQSGRASAPVRPVTHEAP CCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AACTMQEDTPPPPQASSMPPEQWPPQWQAAWSKIPGPAPVVWTYWSLGDDLCGNANAERG CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHCCCHHCCCCCCHHH ALLRKIIGSLRLPRGTSAFWPVALPAAPAPDEHAAPLQANPEIFLAGINRIRPRRVFAFG HHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECHHHCCCHHHHHHH SRALRSFAPHCGLRPYQFVHYNGFRLYAMPDIDYLLESPAPVEAVISCLKVALQKVSR HHHHHHHCCCCCCCCEEEEEECCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA