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The map label for this gene is parB [H]

Identifier: 78355076

GI number: 78355076

Start: 23708

End: 24625

Strand: Reverse

Name: parB [H]

Synonym: Dde_0029

Alternate gene names: 78355076

Gene position: 24625-23708 (Counterclockwise)

Preceding gene: 78355078

Following gene: 78355075

Centisome position: 0.66

GC content: 54.9

Gene sequence:

>918_bases
ATGGCAGCTGTGCAAAGAGGATTAGGTCGCGGACTGGATGCCCTGTTTAAAGGTTATCAGGAAGAAGCGCCCGCGGCAGA
TACCAAACATGAAAATCCGGGCACAGTATCCATAAAGGCGCTGATGCCTAATCCTGATCAACCGCGCAAACATTTCAGCG
AAGAAGCTCTGCAGGAGCTGACAGACTCCATCCGTTCACAGGGTGTATTGCAGCCGCTTCTGGTGCGGCCCGCCAAAAAC
GCGGAAGGCATGTACGAAATAATCGCCGGAGAGCGTCGCTGGCGGGCATGCCAGAAAGCAAGGGTGACAGACGTACCCGT
CATCATCAAAAACCTGACGGATGAAGAGACCCTTGCCGTAGCTCTGATAGAAAACCTGCAGCGCGAAGACCTGAACCCTA
TGGAAGAAGCTCACGGCATGGCACAGCTGAAAGAGCAGTTCGGCATGAATCAGGAAACGCTGGCCGCCAGACTGGGTAAA
AGCCGATCTGCCGTAGCCAATACGCTGCGCCTTTTGCAGCTGCCCGAAGCAGCACAGCAGGACCTGACAAAAGGAGCGCT
GACAGCCGGACATGCCCGCACATTGTTATCCGTTTCGGACGAGACCGCGCGCGCAGCATTGCACAGACGCATAATCGACG
AAGGGCTGACCGTACGGGCAGCAGAAGAGCAGGCCGCATACTTTAAAGAGCACGGCGAATTGCCCGCAGAAAACAGCGCT
GGCCCGGCAAAAAAGGCTTCCGCGCTTCCCAGAACCATGCCCAGCCCGACTATGAGCAGCCTGCGCGAAAAACTTAAAGC
AACCATGCCGGTAAAGGCCAGTATCACCGGTTCGGAAGAAAAAGGAAAAGTAACGTTGTCTTTTTCTTCTCAGGAAGAGC
TGGCAAGGGTTCTTTCACTGCTGGGCATTGAACTGTAG

Upstream 100 bases:

>100_bases
GTATTTTTATCAGACATACTTCGCCTCCGAATAGTTGTTGCGCTTGCATAGGGCTGCAACACAATTCAGGAGGAATCAAC
ATATTGTCAAGGAGAGAGAA

Downstream 100 bases:

>100_bases
CAAAGGCGCCACTCCATGACCTATTCTTTTGATACTGAACGCCTGTGCGCCGCCATACCGGCTCTGACCGGCAAAAGAGT
GCTTATCGTCGGCGACGTGA

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAAVQRGLGRGLDALFKGYQEEAPAADTKHENPGTVSIKALMPNPDQPRKHFSEEALQELTDSIRSQGVLQPLLVRPAKN
AEGMYEIIAGERRWRACQKARVTDVPVIIKNLTDEETLAVALIENLQREDLNPMEEAHGMAQLKEQFGMNQETLAARLGK
SRSAVANTLRLLQLPEAAQQDLTKGALTAGHARTLLSVSDETARAALHRRIIDEGLTVRAAEEQAAYFKEHGELPAENSA
GPAKKASALPRTMPSPTMSSLREKLKATMPVKASITGSEEKGKVTLSFSSQEELARVLSLLGIEL

Sequences:

>Translated_305_residues
MAAVQRGLGRGLDALFKGYQEEAPAADTKHENPGTVSIKALMPNPDQPRKHFSEEALQELTDSIRSQGVLQPLLVRPAKN
AEGMYEIIAGERRWRACQKARVTDVPVIIKNLTDEETLAVALIENLQREDLNPMEEAHGMAQLKEQFGMNQETLAARLGK
SRSAVANTLRLLQLPEAAQQDLTKGALTAGHARTLLSVSDETARAALHRRIIDEGLTVRAAEEQAAYFKEHGELPAENSA
GPAKKASALPRTMPSPTMSSLREKLKATMPVKASITGSEEKGKVTLSFSSQEELARVLSLLGIEL
>Mature_304_residues
AAVQRGLGRGLDALFKGYQEEAPAADTKHENPGTVSIKALMPNPDQPRKHFSEEALQELTDSIRSQGVLQPLLVRPAKNA
EGMYEIIAGERRWRACQKARVTDVPVIIKNLTDEETLAVALIENLQREDLNPMEEAHGMAQLKEQFGMNQETLAARLGKS
RSAVANTLRLLQLPEAAQQDLTKGALTAGHARTLLSVSDETARAALHRRIIDEGLTVRAAEEQAAYFKEHGELPAENSAG
PAKKASALPRTMPSPTMSSLREKLKATMPVKASITGSEEKGKVTLSFSSQEELARVLSLLGIEL

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33200; Mature: 33069

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVQRGLGRGLDALFKGYQEEAPAADTKHENPGTVSIKALMPNPDQPRKHFSEEALQEL
CCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
TDSIRSQGVLQPLLVRPAKNAEGMYEIIAGERRWRACQKARVTDVPVIIKNLTDEETLAV
HHHHHHCCCHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH
ALIENLQREDLNPMEEAHGMAQLKEQFGMNQETLAARLGKSRSAVANTLRLLQLPEAAQQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
DLTKGALTAGHARTLLSVSDETARAALHRRIIDEGLTVRAAEEQAAYFKEHGELPAENSA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCC
GPAKKASALPRTMPSPTMSSLREKLKATMPVKASITGSEEKGKVTLSFSSQEELARVLSL
CCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHH
LGIEL
HCCCC
>Mature Secondary Structure 
AAVQRGLGRGLDALFKGYQEEAPAADTKHENPGTVSIKALMPNPDQPRKHFSEEALQEL
CHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
TDSIRSQGVLQPLLVRPAKNAEGMYEIIAGERRWRACQKARVTDVPVIIKNLTDEETLAV
HHHHHHCCCHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH
ALIENLQREDLNPMEEAHGMAQLKEQFGMNQETLAARLGKSRSAVANTLRLLQLPEAAQQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
DLTKGALTAGHARTLLSVSDETARAALHRRIIDEGLTVRAAEEQAAYFKEHGELPAENSA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCC
GPAKKASALPRTMPSPTMSSLREKLKATMPVKASITGSEEKGKVTLSFSSQEELARVLSL
CCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHH
LGIEL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]