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The map label for this gene is soj [H]

Identifier: 78355078

GI number: 78355078

Start: 25128

End: 25907

Strand: Reverse

Name: soj [H]

Synonym: Dde_0031

Alternate gene names: 78355078

Gene position: 25907-25128 (Counterclockwise)

Preceding gene: 78355079

Following gene: 78355076

Centisome position: 0.69

GC content: 51.15

Gene sequence:

>780_bases
GTGGCAAGAATCATCGCTATCGCTAACCAGAAGGGTGGAGTAGGCAAGACCACGACTGCCATTAACCTTGCGGCCTCGCT
GGCAGTGATGGAAAAACGCGTGTTGCTGGTAGACTGCGACCCGCAAGCTAACGGCACAAGCGGGCTGGGCATTGATCCGG
ACCAACTGGGCGAAAGCCTGTACACGGTTTTTTTCCGGCCGGAAGAAGCGTTGGAAGCCGTTCACCCCACCAATCTGGAA
TATTTGTCCGTACTGCCTACCACCACCGATCTGGTGGCCGTGGAGCTGGAACTGGTGGATAAAATGGGTAGAGAATATTA
TCTGACAGATGTCCTGAAAAATCTGGAAAGCAGATACGATTATATAATTCTGGACTGCCCGCCATCGCTGGGGCTTATCA
CGCTGAATGCGTTGTGTGCCGCACGCGAATTGCTCATTCCGCTTCAATGCGAGTTTTTTGCACTGGAAGGCATTGTCAAA
CTGCTGCAGACCTTCGAACAGGTAAAGAAACGGCTTAACCCGGGGCTGACGCTGATGGGCGTTGTGCTTACCATGTACGA
CCTGCGAAACAGACTTTCGCGTCAGGTAAAAAATGAAGTACGCAAATGTTTTCCGGACCATTTGTTTGAAACAGTGGTAC
CCAGAAATGTGCGCCTTTCCGAAGCCCCGAGCTACGGAAAATCAATCATTCATTATGACGTGAAATCAAAAGGCGCTGAG
GCCTATCTGGCACTGTCCAAAGAAGTTGTGCTCAGAAGGCCCCAGCAGAAAAACGGGTAG

Upstream 100 bases:

>100_bases
TCTGGCCGCTTTACTAGCTATACACTCGACCTCAGCGTGAAATATGACTGCCTGTCATGTTTCACGTGAAACATGAACGT
GCAAACCGAGAGAGAGTGCT

Downstream 100 bases:

>100_bases
GGCGGTTACTCGGTGCACACGGCTGTATGTTCGTAGCAGATGTGGTCTTTGAAGTGTTTTTTACGCACAGTGGCCCCGCA
GGCCTTGCAACGAAAAACCA

Product: chromosome segregation ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MARIIAIANQKGGVGKTTTAINLAASLAVMEKRVLLVDCDPQANGTSGLGIDPDQLGESLYTVFFRPEEALEAVHPTNLE
YLSVLPTTTDLVAVELELVDKMGREYYLTDVLKNLESRYDYIILDCPPSLGLITLNALCAARELLIPLQCEFFALEGIVK
LLQTFEQVKKRLNPGLTLMGVVLTMYDLRNRLSRQVKNEVRKCFPDHLFETVVPRNVRLSEAPSYGKSIIHYDVKSKGAE
AYLALSKEVVLRRPQQKNG

Sequences:

>Translated_259_residues
MARIIAIANQKGGVGKTTTAINLAASLAVMEKRVLLVDCDPQANGTSGLGIDPDQLGESLYTVFFRPEEALEAVHPTNLE
YLSVLPTTTDLVAVELELVDKMGREYYLTDVLKNLESRYDYIILDCPPSLGLITLNALCAARELLIPLQCEFFALEGIVK
LLQTFEQVKKRLNPGLTLMGVVLTMYDLRNRLSRQVKNEVRKCFPDHLFETVVPRNVRLSEAPSYGKSIIHYDVKSKGAE
AYLALSKEVVLRRPQQKNG
>Mature_258_residues
ARIIAIANQKGGVGKTTTAINLAASLAVMEKRVLLVDCDPQANGTSGLGIDPDQLGESLYTVFFRPEEALEAVHPTNLEY
LSVLPTTTDLVAVELELVDKMGREYYLTDVLKNLESRYDYIILDCPPSLGLITLNALCAARELLIPLQCEFFALEGIVKL
LQTFEQVKKRLNPGLTLMGVVLTMYDLRNRLSRQVKNEVRKCFPDHLFETVVPRNVRLSEAPSYGKSIIHYDVKSKGAEA
YLALSKEVVLRRPQQKNG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28853; Mature: 28722

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIIAIANQKGGVGKTTTAINLAASLAVMEKRVLLVDCDPQANGTSGLGIDPDQLGESL
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHH
YTVFFRPEEALEAVHPTNLEYLSVLPTTTDLVAVELELVDKMGREYYLTDVLKNLESRYD
EEEEECCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
YIILDCPPSLGLITLNALCAARELLIPLQCEFFALEGIVKLLQTFEQVKKRLNPGLTLMG
EEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VVLTMYDLRNRLSRQVKNEVRKCFPDHLFETVVPRNVRLSEAPSYGKSIIHYDVKSKGAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCH
AYLALSKEVVLRRPQQKNG
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARIIAIANQKGGVGKTTTAINLAASLAVMEKRVLLVDCDPQANGTSGLGIDPDQLGESL
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHH
YTVFFRPEEALEAVHPTNLEYLSVLPTTTDLVAVELELVDKMGREYYLTDVLKNLESRYD
EEEEECCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
YIILDCPPSLGLITLNALCAARELLIPLQCEFFALEGIVKLLQTFEQVKKRLNPGLTLMG
EEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VVLTMYDLRNRLSRQVKNEVRKCFPDHLFETVVPRNVRLSEAPSYGKSIIHYDVKSKGAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCH
AYLALSKEVVLRRPQQKNG
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]