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The map label for this gene is soj [H]

Identifier: 78224603

GI number: 78224603

Start: 3827297

End: 3828070

Strand: Reverse

Name: soj [H]

Synonym: Gmet_3413

Alternate gene names: 78224603

Gene position: 3828070-3827297 (Counterclockwise)

Preceding gene: 78224604

Following gene: 78224602

Centisome position: 95.76

GC content: 61.11

Gene sequence:

>774_bases
ATGGCAAAGAAGATCTGCATAGCGAATCAGAAGGGTGGGGTCGGCAAGACCACCACCGCCGTCAACCTTGCCGCTTCCCT
TGCGGCGGCGGAAAAGCGGACGCTCCTGGTGGACATGGACCCCCAGGGGAACGCCGGAAGCGGCGTCGGCATCGACAAGG
GGAGCCTGACGGAGTCGGTCTACGACGCCATCATCAACGACGCCGATCCGGCAACGCTCATAGTCAGGACCGACCTCGCC
TGTCTCGACCTCCTTCCCGCCACCACCGACCTGGCCGGCGCCGAGCTGGAACTCGTCTCCGCCATGGCGCGGGAATGGAA
ACTCAAGGAGGCCCTGGCACACCTTGATGATCGGTATGACTACATCATCATCGACTGTCCCCCATCCTTGGGGCTTCTCA
CCGTCAACGCCATGACCGCCGCCGACTCGGTCCTTATCCCGCTCCAGTGCGAGTACTACGCCATGGAAGGGCTTTCACAG
ATCATCAAGACTATCAAGCTGGTTCAGAAGGGGCTCAACCCGAAGCTCGCCATTGAAGGGATCCTTCTCACCATGTACGA
CGGCCGTATCAACCTTTCCCGCCAGGTAAGCGAGGAGATCCGGACCCACTTCGGCTCCCTTGCCTTCCAGACCGTGGTCC
CCCGCAACGTGAGACTCTCCGAGGCCCCGAGCCACGGCCGTCCCATCATCCTGTACGACATAACCTCCAAGGGGGCCGTC
ACCTATATGGAACTGGCCAAGGAACTCATGGAAAGGGAGGCGCACCATGGTTAG

Upstream 100 bases:

>100_bases
CATCGGGTAAAAATACCTTCACAAGTCGGGGGTAATGTGGTAATTATTACGACTTTCCAGCTGCTTTCCCTTCTCACTTT
TCCCGCGACGGTTACCTGTG

Downstream 100 bases:

>100_bases
GAAGACCGGACTCGGCAAGGGGATGGCGGCCCTTCTTCCGGTCGTGGAGGAGGAGGGGAAACGCTACTTCTCCTGCCCCA
TCGAAGAGATCCGTCCCAAC

Product: chromosome segregation ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAKKICIANQKGGVGKTTTAVNLAASLAAAEKRTLLVDMDPQGNAGSGVGIDKGSLTESVYDAIINDADPATLIVRTDLA
CLDLLPATTDLAGAELELVSAMAREWKLKEALAHLDDRYDYIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQ
IIKTIKLVQKGLNPKLAIEGILLTMYDGRINLSRQVSEEIRTHFGSLAFQTVVPRNVRLSEAPSHGRPIILYDITSKGAV
TYMELAKELMEREAHHG

Sequences:

>Translated_257_residues
MAKKICIANQKGGVGKTTTAVNLAASLAAAEKRTLLVDMDPQGNAGSGVGIDKGSLTESVYDAIINDADPATLIVRTDLA
CLDLLPATTDLAGAELELVSAMAREWKLKEALAHLDDRYDYIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQ
IIKTIKLVQKGLNPKLAIEGILLTMYDGRINLSRQVSEEIRTHFGSLAFQTVVPRNVRLSEAPSHGRPIILYDITSKGAV
TYMELAKELMEREAHHG
>Mature_256_residues
AKKICIANQKGGVGKTTTAVNLAASLAAAEKRTLLVDMDPQGNAGSGVGIDKGSLTESVYDAIINDADPATLIVRTDLAC
LDLLPATTDLAGAELELVSAMAREWKLKEALAHLDDRYDYIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQI
IKTIKLVQKGLNPKLAIEGILLTMYDGRINLSRQVSEEIRTHFGSLAFQTVVPRNVRLSEAPSHGRPIILYDITSKGAVT
YMELAKELMEREAHHG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27734; Mature: 27603

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKICIANQKGGVGKTTTAVNLAASLAAAEKRTLLVDMDPQGNAGSGVGIDKGSLTESV
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
YDAIINDADPATLIVRTDLACLDLLPATTDLAGAELELVSAMAREWKLKEALAHLDDRYD
HHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
YIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQIIKTIKLVQKGLNPKLAIEG
EEEEECCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
ILLTMYDGRINLSRQVSEEIRTHFGSLAFQTVVPRNVRLSEAPSHGRPIILYDITSKGAV
EEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCCCCCEEEEEECCCCCH
TYMELAKELMEREAHHG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKKICIANQKGGVGKTTTAVNLAASLAAAEKRTLLVDMDPQGNAGSGVGIDKGSLTESV
CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
YDAIINDADPATLIVRTDLACLDLLPATTDLAGAELELVSAMAREWKLKEALAHLDDRYD
HHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
YIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQIIKTIKLVQKGLNPKLAIEG
EEEEECCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
ILLTMYDGRINLSRQVSEEIRTHFGSLAFQTVVPRNVRLSEAPSHGRPIILYDITSKGAV
EEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCCCCCEEEEEECCCCCH
TYMELAKELMEREAHHG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]