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The map label for this gene is parB [H]

Identifier: 78224602

GI number: 78224602

Start: 3826465

End: 3827304

Strand: Reverse

Name: parB [H]

Synonym: Gmet_3412

Alternate gene names: 78224602

Gene position: 3827304-3826465 (Counterclockwise)

Preceding gene: 78224603

Following gene: 78224601

Centisome position: 95.74

GC content: 62.38

Gene sequence:

>840_bases
ATGGTTAGGAAGACCGGACTCGGCAAGGGGATGGCGGCCCTTCTTCCGGTCGTGGAGGAGGAGGGGAAACGCTACTTCTC
CTGCCCCATCGAAGAGATCCGTCCCAACCGGAACCAGCCCCGCAAGACCTTCACCCCCGACAGGCTGGAAGAGCTTGCCG
CATCCATCCGCGAGAAGGGGATAATCCAGCCCCTCGTGGTGCGGAAAAAGGGAGACCACTACGAGCTCATCGCCGGCGAG
CGCCGCTGGCGGGCCGCCCAGAAGGCCGGACTCCGCGAGGTGCCGGTGGTCATCCAGGACGTCTCCGAGGATACCGCCCT
GGAGATGGCCCTCATCGAGAACATCCAGCGGGAGGACTTGAACGCCGTGGAGGAGGCCGAGGCCTACCACGCCCTCATGG
AGAACTTCAGCCTGACTCAGGACGAGCTCGCGAAGAGGGTGGGGAAGGATCGATCCACCGTGGCCAACTCCCTGCGGCTC
CTGAAGCTTCCCGCCGAACTGAAGAAGGACATCGTCGAAGAGCGCTTGGCCATGGGCCATGCGCGGGCGATTCTTGCCCT
CGATACCGACCTCCAGATGCGGGAGGCCCGCGATGCCGTCGTCAAGGGAAACCTCACCGTGCGCGAGGCGGAAAGCCTTG
TGAAACGGTTGAAGGGGGAGCAGAAGCCCAAGCCTAAGGTTGCAACCGTGGAGGTCCATGCTGCTGACCTCGTGGAGCAG
TTGCGGCGTCGCTTCATGACAAAAATTGCGGTTCGCAAGAGCGGCAAAGGGGGCAAAATCGAGATTGCCTACGGCAGCCG
CGACGAACTTGCAAGAATCGTCGATCTTCTGCTCGGTTAA

Upstream 100 bases:

>100_bases
CCGAGCCACGGCCGTCCCATCATCCTGTACGACATAACCTCCAAGGGGGCCGTCACCTATATGGAACTGGCCAAGGAACT
CATGGAAAGGGAGGCGCACC

Downstream 100 bases:

>100_bases
AGGGCGTGCGATACGGTCGGGAGCATGCACGCCGTATCGTTTTTTGGATAAATTTGTTGACAAGTGCCAATGCGTGTGAT
AGCTAACGTCTGTTTTGCGG

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVRKTGLGKGMAALLPVVEEEGKRYFSCPIEEIRPNRNQPRKTFTPDRLEELAASIREKGIIQPLVVRKKGDHYELIAGE
RRWRAAQKAGLREVPVVIQDVSEDTALEMALIENIQREDLNAVEEAEAYHALMENFSLTQDELAKRVGKDRSTVANSLRL
LKLPAELKKDIVEERLAMGHARAILALDTDLQMREARDAVVKGNLTVREAESLVKRLKGEQKPKPKVATVEVHAADLVEQ
LRRRFMTKIAVRKSGKGGKIEIAYGSRDELARIVDLLLG

Sequences:

>Translated_279_residues
MVRKTGLGKGMAALLPVVEEEGKRYFSCPIEEIRPNRNQPRKTFTPDRLEELAASIREKGIIQPLVVRKKGDHYELIAGE
RRWRAAQKAGLREVPVVIQDVSEDTALEMALIENIQREDLNAVEEAEAYHALMENFSLTQDELAKRVGKDRSTVANSLRL
LKLPAELKKDIVEERLAMGHARAILALDTDLQMREARDAVVKGNLTVREAESLVKRLKGEQKPKPKVATVEVHAADLVEQ
LRRRFMTKIAVRKSGKGGKIEIAYGSRDELARIVDLLLG
>Mature_279_residues
MVRKTGLGKGMAALLPVVEEEGKRYFSCPIEEIRPNRNQPRKTFTPDRLEELAASIREKGIIQPLVVRKKGDHYELIAGE
RRWRAAQKAGLREVPVVIQDVSEDTALEMALIENIQREDLNAVEEAEAYHALMENFSLTQDELAKRVGKDRSTVANSLRL
LKLPAELKKDIVEERLAMGHARAILALDTDLQMREARDAVVKGNLTVREAESLVKRLKGEQKPKPKVATVEVHAADLVEQ
LRRRFMTKIAVRKSGKGGKIEIAYGSRDELARIVDLLLG

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 31370; Mature: 31370

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRKTGLGKGMAALLPVVEEEGKRYFSCPIEEIRPNRNQPRKTFTPDRLEELAASIREKG
CCCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
IIQPLVVRKKGDHYELIAGERRWRAAQKAGLREVPVVIQDVSEDTALEMALIENIQREDL
CCCHHHEECCCCCEEEECCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
NAVEEAEAYHALMENFSLTQDELAKRVGKDRSTVANSLRLLKLPAELKKDIVEERLAMGH
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ARAILALDTDLQMREARDAVVKGNLTVREAESLVKRLKGEQKPKPKVATVEVHAADLVEQ
HHEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHH
LRRRFMTKIAVRKSGKGGKIEIAYGSRDELARIVDLLLG
HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MVRKTGLGKGMAALLPVVEEEGKRYFSCPIEEIRPNRNQPRKTFTPDRLEELAASIREKG
CCCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
IIQPLVVRKKGDHYELIAGERRWRAAQKAGLREVPVVIQDVSEDTALEMALIENIQREDL
CCCHHHEECCCCCEEEECCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
NAVEEAEAYHALMENFSLTQDELAKRVGKDRSTVANSLRLLKLPAELKKDIVEERLAMGH
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ARAILALDTDLQMREARDAVVKGNLTVREAESLVKRLKGEQKPKPKVATVEVHAADLVEQ
HHEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHH
LRRRFMTKIAVRKSGKGGKIEIAYGSRDELARIVDLLLG
HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]