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The map label for this gene is rcp1 [H]

Identifier: 78224604

GI number: 78224604

Start: 3828215

End: 3828634

Strand: Reverse

Name: rcp1 [H]

Synonym: Gmet_3414

Alternate gene names: 78224604

Gene position: 3828634-3828215 (Counterclockwise)

Preceding gene: 78224605

Following gene: 78224603

Centisome position: 95.78

GC content: 57.86

Gene sequence:

>420_bases
ATGGAGAAGTTTCAGGTTCTTCTGGTGGAGGATAATCCGGACGATGAATTTCTCGCGCTGCGCGCCTTGCGCAAGCAGGG
AATCGACAACATTGTCGTTGCCCACGATGGGGAAGAGGCCCTTGCACGTCTTCTGGGCCCCGGTTCTCCGGGGGGGGGAG
GGGAGATTCTCGAACCGGCGTTTATCCTGCTCGACCTGAAGCTGCCGAAAATAAACGGCATTGAGGTTCTCACCGCCCTT
CGCGGCAACGTGAGGACTAAGCAGGTTCCGGTCATCGTCATCAGTTCGTCCCGGGAGGAGACCGACCTGAAATGCTGCCG
TGAGTTGGACGTCCTCAGCTGCCTGACCAAGCCGGTGGATGGGAAAGAGATAGTTGGCATCCTGGAGAAGGCCGGCCTCT
TCGATATACACCCCTCTTGA

Upstream 100 bases:

>100_bases
GGGGTAGAGGTTTGCACTCTGGAGCATTGCAACAGTTTCATTATGGCGTACTATTTAACGGCCAGTTTTGGGAAAGCGGG
ACGCAGAGAGGAGAGTGCCG

Downstream 100 bases:

>100_bases
CGCGCCCTGCCCCGTGGGGGGGCGATGACCCTCATTCCACGCGCCATCGGGTAAAAATACCTTCACAAGTCGGGGGTAAT
GTGGTAATTATTACGACTTT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEKFQVLLVEDNPDDEFLALRALRKQGIDNIVVAHDGEEALARLLGPGSPGGGGEILEPAFILLDLKLPKINGIEVLTAL
RGNVRTKQVPVIVISSSREETDLKCCRELDVLSCLTKPVDGKEIVGILEKAGLFDIHPS

Sequences:

>Translated_139_residues
MEKFQVLLVEDNPDDEFLALRALRKQGIDNIVVAHDGEEALARLLGPGSPGGGGEILEPAFILLDLKLPKINGIEVLTAL
RGNVRTKQVPVIVISSSREETDLKCCRELDVLSCLTKPVDGKEIVGILEKAGLFDIHPS
>Mature_139_residues
MEKFQVLLVEDNPDDEFLALRALRKQGIDNIVVAHDGEEALARLLGPGSPGGGGEILEPAFILLDLKLPKINGIEVLTAL
RGNVRTKQVPVIVISSSREETDLKCCRELDVLSCLTKPVDGKEIVGILEKAGLFDIHPS

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 15064; Mature: 15064

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFQVLLVEDNPDDEFLALRALRKQGIDNIVVAHDGEEALARLLGPGSPGGGGEILEPA
CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCE
FILLDLKLPKINGIEVLTALRGNVRTKQVPVIVISSSREETDLKCCRELDVLSCLTKPVD
EEEEEEECCCCCCHHHEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
GKEIVGILEKAGLFDIHPS
CHHHHHHHHHCCEEECCCC
>Mature Secondary Structure
MEKFQVLLVEDNPDDEFLALRALRKQGIDNIVVAHDGEEALARLLGPGSPGGGGEILEPA
CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCE
FILLDLKLPKINGIEVLTALRGNVRTKQVPVIVISSSREETDLKCCRELDVLSCLTKPVD
EEEEEEECCCCCCHHHEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
GKEIVGILEKAGLFDIHPS
CHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]