| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78224486
Identifier: 78224486
GI number: 78224486
Start: 3709007
End: 3709585
Strand: Direct
Name: 78224486
Synonym: Gmet_3295
Alternate gene names: NA
Gene position: 3709007-3709585 (Clockwise)
Preceding gene: 78224485
Following gene: 78224487
Centisome position: 92.79
GC content: 63.04
Gene sequence:
>579_bases ATGTCCGACACCTGTTGCGCACCCGGCTTCATGCCCCCGAAAAGCATAATCCTCGACGAGGGGGTACGCCTCCTCTACGA CCTGAACAAGGACCAATTGGTCGACATCATCGTCGACAGCGCCAAAAACTGGCTGGCCCACGACGGCCTCTGGTTCCAGG CCATCGAAGCTACCCATGGCATGGACGCGGCCATGGACGCCGACCGCGAGGCGTGGCGGAAGTTCACCGTCATCGAGGCC CAGAGGATCATGGCGCGCCTCGGCATCGAACCGGGGGGAGGAATTCCCGCTTTGGTCGAGTGCCTGAAGCACCGTCTCTA CGCCCGCCTGAACCTCCAGCAGATGGATGAAGCGACCGACACCCGTGCCGTCTTCATGATGGTGGACTGCCGGGTCCAGT CGGCCCGCAAGCGGAAGGGGCTTCCGGACTTCCCCTGCAAGTCGGTGGGAATCGTGGAATACGCCGAATTCGCCCGGACC GTGGACCCCAGGATCGAAACCCGCTGCATCGCCTGCCCCCCCGACCCGCACCCCGACTATTTCTGGTGTGCCTGGGAATT TACCCTGCGGGAGTCATAA
Upstream 100 bases:
>100_bases AGGAATATTCCGAGTCCCAAGGCCTGGGACCGCACCGCGCGCCGGGAGGGGCGCCTCCTTCGCCCGGCGCGCGGTGCCAC CTTTACCAAAGGAGAGAGAC
Downstream 100 bases:
>100_bases CGAAGTCCTCCGGGAGAAAGGGAGAACGTGCAATGAAAGTTCAATCGTCCATAGAAAAGGCCCTGGAGGGGATCCAGGAC GGGGCAACCCTCATGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSDTCCAPGFMPPKSIILDEGVRLLYDLNKDQLVDIIVDSAKNWLAHDGLWFQAIEATHGMDAAMDADREAWRKFTVIEA QRIMARLGIEPGGGIPALVECLKHRLYARLNLQQMDEATDTRAVFMMVDCRVQSARKRKGLPDFPCKSVGIVEYAEFART VDPRIETRCIACPPDPHPDYFWCAWEFTLRES
Sequences:
>Translated_192_residues MSDTCCAPGFMPPKSIILDEGVRLLYDLNKDQLVDIIVDSAKNWLAHDGLWFQAIEATHGMDAAMDADREAWRKFTVIEA QRIMARLGIEPGGGIPALVECLKHRLYARLNLQQMDEATDTRAVFMMVDCRVQSARKRKGLPDFPCKSVGIVEYAEFART VDPRIETRCIACPPDPHPDYFWCAWEFTLRES >Mature_191_residues SDTCCAPGFMPPKSIILDEGVRLLYDLNKDQLVDIIVDSAKNWLAHDGLWFQAIEATHGMDAAMDADREAWRKFTVIEAQ RIMARLGIEPGGGIPALVECLKHRLYARLNLQQMDEATDTRAVFMMVDCRVQSARKRKGLPDFPCKSVGIVEYAEFARTV DPRIETRCIACPPDPHPDYFWCAWEFTLRES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21822; Mature: 21691
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTCCAPGFMPPKSIILDEGVRLLYDLNKDQLVDIIVDSAKNWLAHDGLWFQAIEATHG CCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHEEEHHHHCC MDAAMDADREAWRKFTVIEAQRIMARLGIEPGGGIPALVECLKHRLYARLNLQQMDEATD CCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCC TRAVFMMVDCRVQSARKRKGLPDFPCKSVGIVEYAEFARTVDPRIETRCIACPPDPHPDY CEEEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCE FWCAWEFTLRES EEEEEEEEEECC >Mature Secondary Structure SDTCCAPGFMPPKSIILDEGVRLLYDLNKDQLVDIIVDSAKNWLAHDGLWFQAIEATHG CCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHEEEHHHHCC MDAAMDADREAWRKFTVIEAQRIMARLGIEPGGGIPALVECLKHRLYARLNLQQMDEATD CCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCC TRAVFMMVDCRVQSARKRKGLPDFPCKSVGIVEYAEFARTVDPRIETRCIACPPDPHPDY CEEEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCE FWCAWEFTLRES EEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA