| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224218
Identifier: 78224218
GI number: 78224218
Start: 3410362
End: 3412002
Strand: Direct
Name: 78224218
Synonym: Gmet_3025
Alternate gene names: NA
Gene position: 3410362-3412002 (Clockwise)
Preceding gene: 78224217
Following gene: 78224219
Centisome position: 85.31
GC content: 60.27
Gene sequence:
>1641_bases ATGGGAGAATCCCCCTCAAACCCTTCGGGTCTCACCTTCAGGCTCGCCGATGACCGCAAGCTCAAGGCCATCTATGTGCC TGCGGCCGAGAAAGCCTCCGTGAACCTCGGCTTCCTGAGGCATGCCCTCGTCGCCGGCGGCTTCGCCGATCTCTTCATCT ACGACCATGCCCTCGTGGAGCTCATCAAGCGCTATAATGCCGCCACCCAGGAGTTCGTCTACGATGTCGGCGAACAACGC GACGGGACCTACATCATCCGCAACACTCCTGACAACATCGAGGCCTATCTGACCCTGACCCGCCCCTATGGCGGGAAACC GGTATGCCCGGAACAGCTGCACCAGGCCCTCAGAGAGCAGGGGGTTATCTATGGAGTCCTCACAGATGAAATCGAGACGG CCATAGAGGCCGGCGAGGCCACGGACCTGCTCATTGCGCGGGGAATTCCCCCTGAGCAGGGGACCGACGCAGAACTGGTA AGCCTGATCCCCCAGGCACGCGACCGGCAACCCGAACTTCAGGACAACGAAACCGTCGACTATCGTGACAGGGGAGAGAT CAGCAGCGTCAAGGCGGGTGATCCCCTCATGCGCCGGATTCCTCCGACCCCGGGAAAGCCGGGTACCAACATCATGGGAA AGGAGGTCCCGGCACCACCGGCAAAGGATCTCAAGTTTACCCCGAACCTGCCCGGCACGACCTTTGCCCCCGACGACCCC GACCTTCTCATTGCCGCCATCGACGGACAACCGGTGCTCGTGGCCAACGGCGTCATGATCGAGCCGGTCATAAAGATCAA AAATGTCGACCTTTCATCGGGCAACATCAGCTTCAAGGGTTCCGTCGACATTTCAGGGGATATTACCCCGGGGATGACGG TGCGCGCCACGGGCGACATCACCGTCGGCGGTGTCGTCGAAGGGGCCACCCTTGAGGCGGAGGGGGACATTGTGGTGCGG GGAGGGATAATCGGCCCGGGAGAGAACCGGGACCCCAAGGGTAAGTCAGGCCAAGAACGCGCCCTGATCCGCGCAAAGGG TAACATTGAGGCGCTCTTTGTGGAAAACTCCCTTGTGGAGGCCGGCGGCATGATCCAGATTGCAGGATTTGCCATGCAAA GCAACTTGGTGGCCGGCACCCAGGTTGTGGTGGGCCAGGAGGGGACCACGAAAGGGCACATCATCGGCGGGTCCTGTCAG GCGGTATCGCGGATCCAGGCAGTAACCCTCGGTTCCCACGCGGGAGTCCACACCACAGTGAGCGTGGGGGTTAATCCCCA CGTAAAGGAAAAGCTCTCCACCGTCAAATTGAAGATCGCTGAAGCGGAGCGTGAACTCGACGAATTGACCAAGAGACTTG ACTACTTTGCCTCTACCCCACTCAAAGGCTCCCCCGAGCAGATCAATGAGACCCGCCAGGCCAAGGACAAGCTCGTGACG GCGCTATCGGAACTCAAGGGAGAAAGGAAACGGCTCGAAAAGAGGCTCGAACAGGCCTCCGATGCCCTGATACGCGTGGA GCGGGCCGTATTGAGCGGCGTTGTCATCTCCATCGGCACCAAGACCCTCGAAGTGAAAGATGACATGGAAGGAGGGATCA CCTTCCGACTGGAAGATGACGCCATCGTCGCCTCCCAGTGA
Upstream 100 bases:
>100_bases TTGGGGTGGCTCAAGTTTTTTTACATCCATCCGATGAGTATGCCTATAGACGCACGTCTTCAGAGAGACTCAACAACACC CAACCGAGTAAGGTGGAAGC
Downstream 100 bases:
>100_bases GCCTGCCACTTCGGGCCCCCTTCCCGATTGACAGCTTTAACAAAGTATGGAATGGTTCCTGGTCATCAGGGGAGGGAGCC ATGCTAGTCATAGGACTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Two-Component Fusion Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MGESPSNPSGLTFRLADDRKLKAIYVPAAEKASVNLGFLRHALVAGGFADLFIYDHALVELIKRYNAATQEFVYDVGEQR DGTYIIRNTPDNIEAYLTLTRPYGGKPVCPEQLHQALREQGVIYGVLTDEIETAIEAGEATDLLIARGIPPEQGTDAELV SLIPQARDRQPELQDNETVDYRDRGEISSVKAGDPLMRRIPPTPGKPGTNIMGKEVPAPPAKDLKFTPNLPGTTFAPDDP DLLIAAIDGQPVLVANGVMIEPVIKIKNVDLSSGNISFKGSVDISGDITPGMTVRATGDITVGGVVEGATLEAEGDIVVR GGIIGPGENRDPKGKSGQERALIRAKGNIEALFVENSLVEAGGMIQIAGFAMQSNLVAGTQVVVGQEGTTKGHIIGGSCQ AVSRIQAVTLGSHAGVHTTVSVGVNPHVKEKLSTVKLKIAEAERELDELTKRLDYFASTPLKGSPEQINETRQAKDKLVT ALSELKGERKRLEKRLEQASDALIRVERAVLSGVVISIGTKTLEVKDDMEGGITFRLEDDAIVASQ
Sequences:
>Translated_546_residues MGESPSNPSGLTFRLADDRKLKAIYVPAAEKASVNLGFLRHALVAGGFADLFIYDHALVELIKRYNAATQEFVYDVGEQR DGTYIIRNTPDNIEAYLTLTRPYGGKPVCPEQLHQALREQGVIYGVLTDEIETAIEAGEATDLLIARGIPPEQGTDAELV SLIPQARDRQPELQDNETVDYRDRGEISSVKAGDPLMRRIPPTPGKPGTNIMGKEVPAPPAKDLKFTPNLPGTTFAPDDP DLLIAAIDGQPVLVANGVMIEPVIKIKNVDLSSGNISFKGSVDISGDITPGMTVRATGDITVGGVVEGATLEAEGDIVVR GGIIGPGENRDPKGKSGQERALIRAKGNIEALFVENSLVEAGGMIQIAGFAMQSNLVAGTQVVVGQEGTTKGHIIGGSCQ AVSRIQAVTLGSHAGVHTTVSVGVNPHVKEKLSTVKLKIAEAERELDELTKRLDYFASTPLKGSPEQINETRQAKDKLVT ALSELKGERKRLEKRLEQASDALIRVERAVLSGVVISIGTKTLEVKDDMEGGITFRLEDDAIVASQ >Mature_545_residues GESPSNPSGLTFRLADDRKLKAIYVPAAEKASVNLGFLRHALVAGGFADLFIYDHALVELIKRYNAATQEFVYDVGEQRD GTYIIRNTPDNIEAYLTLTRPYGGKPVCPEQLHQALREQGVIYGVLTDEIETAIEAGEATDLLIARGIPPEQGTDAELVS LIPQARDRQPELQDNETVDYRDRGEISSVKAGDPLMRRIPPTPGKPGTNIMGKEVPAPPAKDLKFTPNLPGTTFAPDDPD LLIAAIDGQPVLVANGVMIEPVIKIKNVDLSSGNISFKGSVDISGDITPGMTVRATGDITVGGVVEGATLEAEGDIVVRG GIIGPGENRDPKGKSGQERALIRAKGNIEALFVENSLVEAGGMIQIAGFAMQSNLVAGTQVVVGQEGTTKGHIIGGSCQA VSRIQAVTLGSHAGVHTTVSVGVNPHVKEKLSTVKLKIAEAERELDELTKRLDYFASTPLKGSPEQINETRQAKDKLVTA LSELKGERKRLEKRLEQASDALIRVERAVLSGVVISIGTKTLEVKDDMEGGITFRLEDDAIVASQ
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58355; Mature: 58224
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESPSNPSGLTFRLADDRKLKAIYVPAAEKASVNLGFLRHALVAGGFADLFIYDHALVE CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LIKRYNAATQEFVYDVGEQRDGTYIIRNTPDNIEAYLTLTRPYGGKPVCPEQLHQALREQ HHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHC GVIYGVLTDEIETAIEAGEATDLLIARGIPPEQGTDAELVSLIPQARDRQPELQDNETVD CCEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC YRDRGEISSVKAGDPLMRRIPPTPGKPGTNIMGKEVPAPPAKDLKFTPNLPGTTFAPDDP CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC DLLIAAIDGQPVLVANGVMIEPVIKIKNVDLSSGNISFKGSVDISGDITPGMTVRATGDI CEEEEEECCCEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCE TVGGVVEGATLEAEGDIVVRGGIIGPGENRDPKGKSGQERALIRAKGNIEALFVENSLVE EECCEEECCEEECCCCEEEECCEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCHHC AGGMIQIAGFAMQSNLVAGTQVVVGQEGTTKGHIIGGSCQAVSRIQAVTLGSHAGVHTTV CCCEEEEEEEEECCCCEECEEEEECCCCCCCCEEECCCHHHHHHEEEEEECCCCCCEEEE SVGVNPHVKEKLSTVKLKIAEAERELDELTKRLDYFASTPLKGSPEQINETRQAKDKLVT EECCCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ALSELKGERKRLEKRLEQASDALIRVERAVLSGVVISIGTKTLEVKDDMEGGITFRLEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCCCCCEEEEEECC AIVASQ EEECCC >Mature Secondary Structure GESPSNPSGLTFRLADDRKLKAIYVPAAEKASVNLGFLRHALVAGGFADLFIYDHALVE CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LIKRYNAATQEFVYDVGEQRDGTYIIRNTPDNIEAYLTLTRPYGGKPVCPEQLHQALREQ HHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHC GVIYGVLTDEIETAIEAGEATDLLIARGIPPEQGTDAELVSLIPQARDRQPELQDNETVD CCEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC YRDRGEISSVKAGDPLMRRIPPTPGKPGTNIMGKEVPAPPAKDLKFTPNLPGTTFAPDDP CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC DLLIAAIDGQPVLVANGVMIEPVIKIKNVDLSSGNISFKGSVDISGDITPGMTVRATGDI CEEEEEECCCEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCE TVGGVVEGATLEAEGDIVVRGGIIGPGENRDPKGKSGQERALIRAKGNIEALFVENSLVE EECCEEECCEEECCCCEEEECCEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCHHC AGGMIQIAGFAMQSNLVAGTQVVVGQEGTTKGHIIGGSCQAVSRIQAVTLGSHAGVHTTV CCCEEEEEEEEECCCCEECEEEEECCCCCCCCEEECCCHHHHHHEEEEEECCCCCCEEEE SVGVNPHVKEKLSTVKLKIAEAERELDELTKRLDYFASTPLKGSPEQINETRQAKDKLVT EECCCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ALSELKGERKRLEKRLEQASDALIRVERAVLSGVVISIGTKTLEVKDDMEGGITFRLEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCCCCCEEEEEECC AIVASQ EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA