| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78224217
Identifier: 78224217
GI number: 78224217
Start: 3409118
End: 3410242
Strand: Direct
Name: 78224217
Synonym: Gmet_3024
Alternate gene names: NA
Gene position: 3409118-3410242 (Clockwise)
Preceding gene: 78224214
Following gene: 78224218
Centisome position: 85.28
GC content: 59.64
Gene sequence:
>1125_bases ATGTATCAGGATGCTTTCAGATCGCTATTTGAGATTAATATGGGGATTCGTAGCGGAGAACGGGTACTTGTTTTCAGTGA CACGATCCGCATCGACGAGGCACCAATCCCTTCCGAGCGGAACCGCCGCGAACGCCTATTGCAGGTAGCGGAGGAAGCCG CCCGTTTCGCGGAAACAACGTACGGAAGGACGGATTTCGTTTCTTTCCCCGCAACTGCCGCATCGGGAGCCGAGCCGCCG GAAACTCTCTGGCGGTCAGCCTTCGGGAATGGCATTGTCGACACGCTTGCCGCCGAGGGCATCCTGCCGCGTCTGTTGGC AAAAGAGGCTACAGCGGACGATGTTGAGCGCTCCAGGGAACTGATACTCGCCTCCCGTCGTGACGTGGTTGACGTGGTGG TGGCCCTGGCAAACAACTCAACGAGCCATACCCGCTTCCGGTCCCTCGTGAACGCGGCCGGAGGACGCTTCGCAAGTCTT CCCCACTTCGATCCCGAAATGTTCTTCACCTCCATGCAGGTCGACTGGCATGCCCTGGCAGAACGGACCAAACAGCTTGC GGCGGCAGTTAACGAAGCAACGGAAATCCTTATTGAAACCCCCAACGGGACGCGGATGCGGATCGGCAAGGCGGGTCGAC AGGCCGAGGGAGACGACGGCCTCCTGACCGCACCGGGAAGCTTCGGCAACCTCCCGGCCGGCGAGGTCTACCTGGCCCCC CTCGAAGGGACAAGCGAAGGGGTCATGGTGCTGGAGTATGGACCGACCCGAAAGCTCTCCTCCTCCGTGGAACTAATCGT GCGCAACGGAATCGTTACCGATATCCGCGGCGACGAACCCCATCGGGAGTGGCTTGAACGCCGGTTCGCCGAGAACGGAA AAAACCGCAACATCGCCGAACTCGGCATTGGAACCAATGACCGTGCTACCAGGCCCGACAACATACTCGAAGCAGAGAAG ATTCTCGGCACTATCCACATCGCCCTCGGTGACAATTCAGGTTTCGGCGGCACGGTCCAGACGCCGTTTCACGAGGACTA CGTCTTCTACCGACCAACCCTTACCGCCGTAGCCGCTAATGGCTCCCCCACGGTGCTGTTGAGGGACGGTACGCTTTTGC TCTAA
Upstream 100 bases:
>100_bases ATCATTGGTTTTCCCTTATGATTGCTCCACCTCTCCCCCTCTGGTATAGTTCCCGGACAGCCACCAGTCGTGACCCATCC ATACGGAAAAGGAGCCTGTA
Downstream 100 bases:
>100_bases TCCCCTTCACACAAATTGCTTGGGGTGGCTCAAGTTTTTTTACATCCATCCGATGAGTATGCCTATAGACGCACGTCTTC AGAGAGACTCAACAACACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Leucyl Aminopeptidase-Like Protein; Aminopeptidase T; Aminopeptidase-Like Protein
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MYQDAFRSLFEINMGIRSGERVLVFSDTIRIDEAPIPSERNRRERLLQVAEEAARFAETTYGRTDFVSFPATAASGAEPP ETLWRSAFGNGIVDTLAAEGILPRLLAKEATADDVERSRELILASRRDVVDVVVALANNSTSHTRFRSLVNAAGGRFASL PHFDPEMFFTSMQVDWHALAERTKQLAAAVNEATEILIETPNGTRMRIGKAGRQAEGDDGLLTAPGSFGNLPAGEVYLAP LEGTSEGVMVLEYGPTRKLSSSVELIVRNGIVTDIRGDEPHREWLERRFAENGKNRNIAELGIGTNDRATRPDNILEAEK ILGTIHIALGDNSGFGGTVQTPFHEDYVFYRPTLTAVAANGSPTVLLRDGTLLL
Sequences:
>Translated_374_residues MYQDAFRSLFEINMGIRSGERVLVFSDTIRIDEAPIPSERNRRERLLQVAEEAARFAETTYGRTDFVSFPATAASGAEPP ETLWRSAFGNGIVDTLAAEGILPRLLAKEATADDVERSRELILASRRDVVDVVVALANNSTSHTRFRSLVNAAGGRFASL PHFDPEMFFTSMQVDWHALAERTKQLAAAVNEATEILIETPNGTRMRIGKAGRQAEGDDGLLTAPGSFGNLPAGEVYLAP LEGTSEGVMVLEYGPTRKLSSSVELIVRNGIVTDIRGDEPHREWLERRFAENGKNRNIAELGIGTNDRATRPDNILEAEK ILGTIHIALGDNSGFGGTVQTPFHEDYVFYRPTLTAVAANGSPTVLLRDGTLLL >Mature_374_residues MYQDAFRSLFEINMGIRSGERVLVFSDTIRIDEAPIPSERNRRERLLQVAEEAARFAETTYGRTDFVSFPATAASGAEPP ETLWRSAFGNGIVDTLAAEGILPRLLAKEATADDVERSRELILASRRDVVDVVVALANNSTSHTRFRSLVNAAGGRFASL PHFDPEMFFTSMQVDWHALAERTKQLAAAVNEATEILIETPNGTRMRIGKAGRQAEGDDGLLTAPGSFGNLPAGEVYLAP LEGTSEGVMVLEYGPTRKLSSSVELIVRNGIVTDIRGDEPHREWLERRFAENGKNRNIAELGIGTNDRATRPDNILEAEK ILGTIHIALGDNSGFGGTVQTPFHEDYVFYRPTLTAVAANGSPTVLLRDGTLLL
Specific function: Unknown
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40882; Mature: 40882
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQDAFRSLFEINMGIRSGERVLVFSDTIRIDEAPIPSERNRRERLLQVAEEAARFAETT CCHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC YGRTDFVSFPATAASGAEPPETLWRSAFGNGIVDTLAAEGILPRLLAKEATADDVERSRE CCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LILASRRDVVDVVVALANNSTSHTRFRSLVNAAGGRFASLPHFDPEMFFTSMQVDWHALA HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCHHHHHH ERTKQLAAAVNEATEILIETPNGTRMRIGKAGRQAEGDDGLLTAPGSFGNLPAGEVYLAP HHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE LEGTSEGVMVLEYGPTRKLSSSVELIVRNGIVTDIRGDEPHREWLERRFAENGKNRNIAE CCCCCCCEEEEEECCCHHHHHHHHEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCEEE LGIGTNDRATRPDNILEAEKILGTIHIALGDNSGFGGTVQTPFHEDYVFYRPTLTAVAAN ECCCCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEECC GSPTVLLRDGTLLL CCCEEEEECCCEEC >Mature Secondary Structure MYQDAFRSLFEINMGIRSGERVLVFSDTIRIDEAPIPSERNRRERLLQVAEEAARFAETT CCHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC YGRTDFVSFPATAASGAEPPETLWRSAFGNGIVDTLAAEGILPRLLAKEATADDVERSRE CCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LILASRRDVVDVVVALANNSTSHTRFRSLVNAAGGRFASLPHFDPEMFFTSMQVDWHALA HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCHHHHHH ERTKQLAAAVNEATEILIETPNGTRMRIGKAGRQAEGDDGLLTAPGSFGNLPAGEVYLAP HHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE LEGTSEGVMVLEYGPTRKLSSSVELIVRNGIVTDIRGDEPHREWLERRFAENGKNRNIAE CCCCCCCEEEEEECCCHHHHHHHHEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCEEE LGIGTNDRATRPDNILEAEKILGTIHIALGDNSGFGGTVQTPFHEDYVFYRPTLTAVAAN ECCCCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEEECC GSPTVLLRDGTLLL CCCEEEEECCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA