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The map label for this gene is yrrL [H]

Identifier: 78224214

GI number: 78224214

Start: 3403021

End: 3404097

Strand: Direct

Name: yrrL [H]

Synonym: Gmet_3021

Alternate gene names: 78224214

Gene position: 3403021-3404097 (Clockwise)

Preceding gene: 78224213

Following gene: 78224217

Centisome position: 85.13

GC content: 60.72

Gene sequence:

>1077_bases
ATGGAAGAGTCCATACCACCAAAAGATACCCCCGGCGAAACCGGTGATCAGCCGCCCCGGCGTTTCGTACTGAAAGATCG
CCGTATTCTGGCGGCGTCGGCCCTTGCCCTCCTTCTGCTCCTGGTCCTCCCTGCCCGCTATCTATTCTTTCTCGCCCTAC
CTGCCGGCGACGGCAAGACAGTGCGGATCGTCGACTTTGCGAAGGGGGAATCGGTCGCCAGGATCGCCGCCGACCTCGAA
CGGGACGGGATTGTCTCCAGTGCCCGCATCTTTGTCATCCATACCCGTCTCAAGGGAGTATCAGGAAAACTCCAGGCAGG
GGAATACCAGTTCAGCAACGGAATGCGGCCCGGGGAAATCCTCCGCATGATGCTCAACGGTGAGGTCGCGGTGCGCCGGT
TCGCCGTCCCCGAAGGATACTCCATCCACCAACTGGCAGAACTCCTTGAGAGTCAGAAACTCTTTAGCAAAGAAGGGTTC
CTCAAGGCTGCCACCGACCCTGCGCTCCTGACCGAACTGGGGATTGAGGGGAAAAGCGTCGAAGGGTATCTCTTCCCGAG
CACCTACGATGTGACGCGCACCATGGACGAGGCAGCACTTATCAGGGCCATGACGGCCCAGTTCCACAAGGTCTGCGATG
GTCAACTCGCCGACGCTGCGCGCCGCATCGGCATGACCCCCTTTCAGGTTGTAACCCTCGCCTCTCTCATCGAGAAAGAG
GCTGTAGTTGCCACGGATCGCCCACTCATCTCGTCGGTCTTTCACAACCGGCTTGCCAAGGGAATGCGCCTCCAGAGCGA
CCCCACCGCCGTCTACGGCGTCAGGGCCTTCGCCAGCGCCGTCACGAAGCAGGACATCGAGCGCCAAACGCCCTACAACA
CCTATCTCATTGCCGGGCTCCCCCCCGGCCCCATCGGCAATCCAAGCAAGGGAGCGATTGAGGCCGCCCTCAACCCGGTC
CGCACCCGCTACCTGTACTTCGTATCAAAGAAAGACGGCACCCATCACTTCTCCACCAGCCTCGACGAGCACAACGCCGC
TGTCGCCACCTACCTGAAGACGAACCGTGGCAACTGA

Upstream 100 bases:

>100_bases
TTCTGGTCATCTGGAAACACCGGGAGAACATCCAGCGACTGCGGGCTGGCACGGAAAACCGCTTCAAGGCATGACACGCA
CTCAGTGATACCCTGCTTCC

Downstream 100 bases:

>100_bases
ACAGCGCTAACCAGTGCGACCGGAACCGAAACCCAGGGACACCGGCCTGTCAGCAATAGTGTTCGCGCGCCTCCAAAAAC
AAAAAACCCCGCCGTTTCGT

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MEESIPPKDTPGETGDQPPRRFVLKDRRILAASALALLLLLVLPARYLFFLALPAGDGKTVRIVDFAKGESVARIAADLE
RDGIVSSARIFVIHTRLKGVSGKLQAGEYQFSNGMRPGEILRMMLNGEVAVRRFAVPEGYSIHQLAELLESQKLFSKEGF
LKAATDPALLTELGIEGKSVEGYLFPSTYDVTRTMDEAALIRAMTAQFHKVCDGQLADAARRIGMTPFQVVTLASLIEKE
AVVATDRPLISSVFHNRLAKGMRLQSDPTAVYGVRAFASAVTKQDIERQTPYNTYLIAGLPPGPIGNPSKGAIEAALNPV
RTRYLYFVSKKDGTHHFSTSLDEHNAAVATYLKTNRGN

Sequences:

>Translated_358_residues
MEESIPPKDTPGETGDQPPRRFVLKDRRILAASALALLLLLVLPARYLFFLALPAGDGKTVRIVDFAKGESVARIAADLE
RDGIVSSARIFVIHTRLKGVSGKLQAGEYQFSNGMRPGEILRMMLNGEVAVRRFAVPEGYSIHQLAELLESQKLFSKEGF
LKAATDPALLTELGIEGKSVEGYLFPSTYDVTRTMDEAALIRAMTAQFHKVCDGQLADAARRIGMTPFQVVTLASLIEKE
AVVATDRPLISSVFHNRLAKGMRLQSDPTAVYGVRAFASAVTKQDIERQTPYNTYLIAGLPPGPIGNPSKGAIEAALNPV
RTRYLYFVSKKDGTHHFSTSLDEHNAAVATYLKTNRGN
>Mature_358_residues
MEESIPPKDTPGETGDQPPRRFVLKDRRILAASALALLLLLVLPARYLFFLALPAGDGKTVRIVDFAKGESVARIAADLE
RDGIVSSARIFVIHTRLKGVSGKLQAGEYQFSNGMRPGEILRMMLNGEVAVRRFAVPEGYSIHQLAELLESQKLFSKEGF
LKAATDPALLTELGIEGKSVEGYLFPSTYDVTRTMDEAALIRAMTAQFHKVCDGQLADAARRIGMTPFQVVTLASLIEKE
AVVATDRPLISSVFHNRLAKGMRLQSDPTAVYGVRAFASAVTKQDIERQTPYNTYLIAGLPPGPIGNPSKGAIEAALNPV
RTRYLYFVSKKDGTHHFSTSLDEHNAAVATYLKTNRGN

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=286, Percent_Identity=35.3146853146853, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 39132; Mature: 39132

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESIPPKDTPGETGDQPPRRFVLKDRRILAASALALLLLLVLPARYLFFLALPAGDGKT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE
VRIVDFAKGESVARIAADLERDGIVSSARIFVIHTRLKGVSGKLQAGEYQFSNGMRPGEI
EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEECCCCCCHHHH
LRMMLNGEVAVRRFAVPEGYSIHQLAELLESQKLFSKEGFLKAATDPALLTELGIEGKSV
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHCCCCCCC
EGYLFPSTYDVTRTMDEAALIRAMTAQFHKVCDGQLADAARRIGMTPFQVVTLASLIEKE
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
AVVATDRPLISSVFHNRLAKGMRLQSDPTAVYGVRAFASAVTKQDIERQTPYNTYLIAGL
HHEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PPGPIGNPSKGAIEAALNPVRTRYLYFVSKKDGTHHFSTSLDEHNAAVATYLKTNRGN
CCCCCCCCCCCHHHHHHHHHEEEEEEEEECCCCCCHHHCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MEESIPPKDTPGETGDQPPRRFVLKDRRILAASALALLLLLVLPARYLFFLALPAGDGKT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE
VRIVDFAKGESVARIAADLERDGIVSSARIFVIHTRLKGVSGKLQAGEYQFSNGMRPGEI
EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEECCCCCCHHHH
LRMMLNGEVAVRRFAVPEGYSIHQLAELLESQKLFSKEGFLKAATDPALLTELGIEGKSV
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHCCCCCCC
EGYLFPSTYDVTRTMDEAALIRAMTAQFHKVCDGQLADAARRIGMTPFQVVTLASLIEKE
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
AVVATDRPLISSVFHNRLAKGMRLQSDPTAVYGVRAFASAVTKQDIERQTPYNTYLIAGL
HHEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PPGPIGNPSKGAIEAALNPVRTRYLYFVSKKDGTHHFSTSLDEHNAAVATYLKTNRGN
CCCCCCCCCCCHHHHHHHHHEEEEEEEEECCCCCCHHHCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]