Click here to switch to the map view.

The map label for this gene is 78224098

Identifier: 78224098

GI number: 78224098

Start: 3285351

End: 3285623

Strand: Reverse

Name: 78224098

Synonym: Gmet_2902

Alternate gene names: NA

Gene position: 3285623-3285351 (Counterclockwise)

Preceding gene: 78224099

Following gene: 78224097

Centisome position: 82.19

GC content: 56.04

Gene sequence:

>273_bases
ATGAAAAGAATCATCGCATCTCTTGCCCTGTCCGTCTTCTGCGCCGGCCTTGCCTTCGCCGCTGACGAGCTTACCTTCAA
GGCAAAGAACGGGGACGTCAAGTTCCCGCACAAAAAGCACCAGCAAGTGGTGGGCAACTGCAAGAAGTGCCACGAGAAGG
GCCCGGGCAAGATCGAGGGCTTTGGCAAGGATTGGGCTCACAAGACTTGCAAGGGCTGCCACGAAGAAATGAAGAAGGGG
CCGACCAAGTGCGGCGATTGCCACAAGAAGTAA

Upstream 100 bases:

>100_bases
AACTTTTTGACTTGCAGGGTTACTCTTGACAAACAAAATTGCTCGGGTATAAGTTTCTGACGGTTTTTTACAAACGCTTC
AAGCAAAAGGGGGTACACCA

Downstream 100 bases:

>100_bases
TGGTGTAGCAATCCGGCGTTACCAGCGGTAACGGAAAGGGGATAACGGACGACAGTTATCCCCTTTCTTTTTTGTTGATC
TTATATGAGAAAAAATTAAA

Product: cytochrome c3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKRIIASLALSVFCAGLAFAADELTFKAKNGDVKFPHKKHQQVVGNCKKCHEKGPGKIEGFGKDWAHKTCKGCHEEMKKG
PTKCGDCHKK

Sequences:

>Translated_90_residues
MKRIIASLALSVFCAGLAFAADELTFKAKNGDVKFPHKKHQQVVGNCKKCHEKGPGKIEGFGKDWAHKTCKGCHEEMKKG
PTKCGDCHKK
>Mature_90_residues
MKRIIASLALSVFCAGLAFAADELTFKAKNGDVKFPHKKHQQVVGNCKKCHEKGPGKIEGFGKDWAHKTCKGCHEEMKKG
PTKCGDCHKK

Specific function: May be involved in anaerobic iron respiration

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYC7_GEOMG (P81894)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_385845.1
- ProteinModelPortal:   P81894
- SMR:   P81894
- STRING:   P81894
- GeneID:   3740852
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_2902
- eggNOG:   NOG78461
- HOGENOM:   HBG489053
- OMA:   SVFCAGL
- ProtClustDB:   CLSK827780
- BioCyc:   GMET269799:GMET_2902-MONOMER
- GO:   GO:0006810
- InterPro:   IPR002322
- InterPro:   IPR020942
- PRINTS:   PR00609

Pfam domain/function: PF02085 Cytochrom_CIII

EC number: NA

Molecular weight: Translated: 9898; Mature: 9898

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS51007 CYTC

Important sites: BINDING 47-47 BINDING 50-50 BINDING 70-70 BINDING 73-73 BINDING 84-84 BINDING 87-87

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIIASLALSVFCAGLAFAADELTFKAKNGDVKFPHKKHQQVVGNCKKCHEKGPGKIEG
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
FGKDWAHKTCKGCHEEMKKGPTKCGDCHKK
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRIIASLALSVFCAGLAFAADELTFKAKNGDVKFPHKKHQQVVGNCKKCHEKGPGKIEG
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
FGKDWAHKTCKGCHEEMKKGPTKCGDCHKK
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA