| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is resB [H]
Identifier: 78224097
GI number: 78224097
Start: 3283799
End: 3285157
Strand: Reverse
Name: resB [H]
Synonym: Gmet_2901
Alternate gene names: 78224097
Gene position: 3285157-3283799 (Counterclockwise)
Preceding gene: 78224098
Following gene: 78224096
Centisome position: 82.18
GC content: 56.14
Gene sequence:
>1359_bases TTGACAACCAGCAATCGCGGCTTTTTGGAAACCCTCTGGGATTTCTTCTGCTCTCTTAAGCTTGCCATATCCCTTCTTAT CCTGTTGGCAGCCACATCGATCATCGGCACGATCATTCCCCAAGGGCCTCCCCCCCCCGAGTATCTTCAGACGATCAGCG AGGGGAAACACAAGTTCTACCAGGCACTCGGCTTTTTCGACATGTACCACTCCTGGTGGTTCATCCTCCTGCTCTATCTC TTTACGGTCAATATTGTTGCCTGTTCCATCAAGCGTCTGCCGCGGGTCTGGAAGGCCATTTCCGAGCCTACCCTGGTCAT GGATGACAAATTTGAAAAAACATTGAGCCTGACCCACGACTTCAAGATGAATGGCGATGCAGCATCGCTTCGGGACAAGA TGGTAGCCTTCCTCAAGGGTGAATTTGCCGCACCGGTGGTGACCGAGCGGGATGGCGAGTTCCACCTCTTTGCCCAGAAG ACTCCCTACAGCCGGCTCGGGGTCTATGTGGTCCACCTGAGCATTATCGTCATCTTTATCGGAGCACTCATCGGCTCATT CTTCGGGTACAAGGCCTACGTCGAAATCGCCGAGGGCACCAGCACGTCGGTCGTTCACAACCGTGCGGACATGAAGCCGA TTGATCTCGGCTTCACCGTCCGGTGCGATAAATTCACGGTTTCATACTACGATACCGGAGCTCCGAAGGAGTTCAAGAGT CTCCTGACCGTTATCGACGGCGGCAAGGTGGTGTTCGACAAGCGGCCGGTCATCGTCAACGATCCGCTTACCTACAAGGG GATTACCTTCTACCAGGCGAGCTACAGGCCGGCCGAGGGGGCGGGGCTCTACTTCTTCACGGTACGTGAACGCAAAGGTG GCGCGCCGGCAAAGATTTCGATCCAGCAGGGTGAGCGGAAAGTCCTTTCCGACGGCTCAACCATGCAGGTTCTCGAGGTT GCCCAGGAGGTGAGCAAGTTCATTCCCCAGTTCCAGGGGCCGGCCGCGAGAATCGAAGTGACCCCCAAGGGAGGCGGCGC CCCCCAGGTCTTCATTGTCTTTCAAAATTACCCCGAGTTCGATGCCCAGCGTGGCGGCGACCTGATCTTCAGTTATGACG GCTCCGAAGAAAAAATGTTTACCGGGCTACAGGTGGCCAAAGATCCTGGGGTGTGGGTCGTCTGGGCCGGTTGTTTCCTC ATGGTTGCCGGCTGCTGCATGGCATTCTTCATGTCCCACAGGCGTATCTGGATTCGGGTGCGCAAGGGGGAGGTCACCCT TGGCGGCAGCGCAAACAAGAACCAACCGGGCTTCCAGCTTGCTTTTGACGCGCTGGTCGACAAGCTGAAACAACAGTAA
Upstream 100 bases:
>100_bases AATTAAATATTTGTTTTTTGACGCGAACTTTGCTTATAATGAGTCCCGTCCGCGAGGACATTTTTTTTGACAAAATCCAT AGGAACCTGGGAGCGTTACG
Downstream 100 bases:
>100_bases CAGGCGGAGGACCACTCAATGACCAGTTCCATGCTGTTCAATATCGCAACTTTTTCCTATCTGATTTCCATGCTCGCCTT CTTCACCTTCCTGGCGGTGA
Product: ResB-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTTSNRGFLETLWDFFCSLKLAISLLILLAATSIIGTIIPQGPPPPEYLQTISEGKHKFYQALGFFDMYHSWWFILLLYL FTVNIVACSIKRLPRVWKAISEPTLVMDDKFEKTLSLTHDFKMNGDAASLRDKMVAFLKGEFAAPVVTERDGEFHLFAQK TPYSRLGVYVVHLSIIVIFIGALIGSFFGYKAYVEIAEGTSTSVVHNRADMKPIDLGFTVRCDKFTVSYYDTGAPKEFKS LLTVIDGGKVVFDKRPVIVNDPLTYKGITFYQASYRPAEGAGLYFFTVRERKGGAPAKISIQQGERKVLSDGSTMQVLEV AQEVSKFIPQFQGPAARIEVTPKGGGAPQVFIVFQNYPEFDAQRGGDLIFSYDGSEEKMFTGLQVAKDPGVWVVWAGCFL MVAGCCMAFFMSHRRIWIRVRKGEVTLGGSANKNQPGFQLAFDALVDKLKQQ
Sequences:
>Translated_452_residues MTTSNRGFLETLWDFFCSLKLAISLLILLAATSIIGTIIPQGPPPPEYLQTISEGKHKFYQALGFFDMYHSWWFILLLYL FTVNIVACSIKRLPRVWKAISEPTLVMDDKFEKTLSLTHDFKMNGDAASLRDKMVAFLKGEFAAPVVTERDGEFHLFAQK TPYSRLGVYVVHLSIIVIFIGALIGSFFGYKAYVEIAEGTSTSVVHNRADMKPIDLGFTVRCDKFTVSYYDTGAPKEFKS LLTVIDGGKVVFDKRPVIVNDPLTYKGITFYQASYRPAEGAGLYFFTVRERKGGAPAKISIQQGERKVLSDGSTMQVLEV AQEVSKFIPQFQGPAARIEVTPKGGGAPQVFIVFQNYPEFDAQRGGDLIFSYDGSEEKMFTGLQVAKDPGVWVVWAGCFL MVAGCCMAFFMSHRRIWIRVRKGEVTLGGSANKNQPGFQLAFDALVDKLKQQ >Mature_451_residues TTSNRGFLETLWDFFCSLKLAISLLILLAATSIIGTIIPQGPPPPEYLQTISEGKHKFYQALGFFDMYHSWWFILLLYLF TVNIVACSIKRLPRVWKAISEPTLVMDDKFEKTLSLTHDFKMNGDAASLRDKMVAFLKGEFAAPVVTERDGEFHLFAQKT PYSRLGVYVVHLSIIVIFIGALIGSFFGYKAYVEIAEGTSTSVVHNRADMKPIDLGFTVRCDKFTVSYYDTGAPKEFKSL LTVIDGGKVVFDKRPVIVNDPLTYKGITFYQASYRPAEGAGLYFFTVRERKGGAPAKISIQQGERKVLSDGSTMQVLEVA QEVSKFIPQFQGPAARIEVTPKGGGAPQVFIVFQNYPEFDAQRGGDLIFSYDGSEEKMFTGLQVAKDPGVWVVWAGCFLM VAGCCMAFFMSHRRIWIRVRKGEVTLGGSANKNQPGFQLAFDALVDKLKQQ
Specific function: Required for the biogenesis of c-type cytochromes [H]
COG id: COG1333
COG function: function code O; ResB protein required for cytochrome c biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007816 [H]
Pfam domain/function: PF05140 ResB [H]
EC number: NA
Molecular weight: Translated: 50476; Mature: 50345
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSNRGFLETLWDFFCSLKLAISLLILLAATSIIGTIIPQGPPPPEYLQTISEGKHKFY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH QALGFFDMYHSWWFILLLYLFTVNIVACSIKRLPRVWKAISEPTLVMDDKFEKTLSLTHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHEEC FKMNGDAASLRDKMVAFLKGEFAAPVVTERDGEFHLFAQKTPYSRLGVYVVHLSIIVIFI EEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH GALIGSFFGYKAYVEIAEGTSTSVVHNRADMKPIDLGFTVRCDKFTVSYYDTGAPKEFKS HHHHHHHHCCEEEEEEECCCCCHHEECCCCCCEECCCEEEEEEEEEEEEECCCCCHHHHH LLTVIDGGKVVFDKRPVIVNDPLTYKGITFYQASYRPAEGAGLYFFTVRERKGGAPAKIS HHHHHCCCEEEEECCCEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEE IQQGERKVLSDGSTMQVLEVAQEVSKFIPQFQGPAARIEVTPKGGGAPQVFIVFQNYPEF ECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCC DAQRGGDLIFSYDGSEEKMFTGLQVAKDPGVWVVWAGCFLMVAGCCMAFFMSHRRIWIRV CCCCCCCEEEEECCCCCHHEECEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEE RKGEVTLGGSANKNQPGFQLAFDALVDKLKQQ EECEEEECCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TTSNRGFLETLWDFFCSLKLAISLLILLAATSIIGTIIPQGPPPPEYLQTISEGKHKFY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH QALGFFDMYHSWWFILLLYLFTVNIVACSIKRLPRVWKAISEPTLVMDDKFEKTLSLTHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHEEC FKMNGDAASLRDKMVAFLKGEFAAPVVTERDGEFHLFAQKTPYSRLGVYVVHLSIIVIFI EEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH GALIGSFFGYKAYVEIAEGTSTSVVHNRADMKPIDLGFTVRCDKFTVSYYDTGAPKEFKS HHHHHHHHCCEEEEEEECCCCCHHEECCCCCCEECCCEEEEEEEEEEEEECCCCCHHHHH LLTVIDGGKVVFDKRPVIVNDPLTYKGITFYQASYRPAEGAGLYFFTVRERKGGAPAKIS HHHHHCCCEEEEECCCEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEE IQQGERKVLSDGSTMQVLEVAQEVSKFIPQFQGPAARIEVTPKGGGAPQVFIVFQNYPEF ECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCC DAQRGGDLIFSYDGSEEKMFTGLQVAKDPGVWVVWAGCFLMVAGCCMAFFMSHRRIWIRV CCCCCCCEEEEECCCCCHHEECEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEE RKGEVTLGGSANKNQPGFQLAFDALVDKLKQQ EECEEEECCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]