| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is exoA [H]
Identifier: 78224090
GI number: 78224090
Start: 3274949
End: 3275899
Strand: Reverse
Name: exoA [H]
Synonym: Gmet_2894
Alternate gene names: 78224090
Gene position: 3275899-3274949 (Counterclockwise)
Preceding gene: 78224091
Following gene: 78224089
Centisome position: 81.95
GC content: 63.3
Gene sequence:
>951_bases GTGGAGCGGCTCCGCACGGTTAACTACCCGGCCGGGAGCATTGAGGTGCTTGTCGCCGAAGGGTGTTCGCCGAGCCGCCA GCGGAACCGGGCAGCTGCCATGGCCAAGGGGAAGCTGGTATATTTCCTCGATGACGACTCGCTGGTTGATCCCGCCTTTT TGCAGCGAGCGGTCGAGCGCTTCGTTGATCCGCGTGTGGCGGCAGTGGGGGGACCGTCCCTTACTCCGGCAACCGACACC TTCTTCCAGCGGGCTGTGGGGCTCGTTATTTCCTCTCCCTTCGGTGGCGGCGGGGCGCGCAACCGCTACCGCCGGACCGG CGCCGCACGTCCCTCAAGCGAGCGGGAGCTGATCCTCTGCAATCTGGCCTTCCGCCGGGAACTCTTCCTTGCCTTTGGAG GGCTCGATGAACGCCTCTACCCGAATGAAGAAAACGAGCTTATGGATCGCCTCCTGACCGATGGATGGCTCCTGGTCCAC GACCCGGAGTTGGCGATTTATCGGAGCCAGCGGCCAAGCTTTCGGGCTTTTATGCGCCAGTTTTTCGGCTACGGGACCGG ACGGGGAGAGCAGACGCGCATTGCCGGCCTCCGCCACGGGATCGATTTCGCGCCGGCGTTTTTTCTCGCCTATCTTCTGC TGCTCCCCTGGGCACCGACGCTGTTGTGGTTTATCCCCTTGATCTGTTACGGCGCGTTACTTATTGCAGCTGCCGTTGCC GCAGCATGGCAGGGAAGGGCTCCGGCTGCAATCCCTTTGCTGTTTATACTCTTTCCAACCCTCCATCTGTCGTACGGGGC GGGGTTGCTTAAGGGGGTGCTCCGACCCCGTTTCGCACAGTCTCAGACAGAGCCACCGGCGGTGGCGGTGCGGGTGATTA AGGAGTTGGGGATGCCGTGGGCCGCCGCCGGCGTTGCGCGCGCCGACAATGACGGACGGTTGACGCCGTGA
Upstream 100 bases:
>100_bases GATCTCCCGGTTTTTGTGTTTTTCAAGGCATTCAAGGATGAATGATAATCAGCCGGTTTCGATCATAATTCCCGTCCGCC CGGGGGGCGAGGTTCGGGCT
Downstream 100 bases:
>100_bases CCGGGTGTTTGACAGGGATCAGGAAGAGAACGGTCCTGCTGTTCTTCCTTGCGACGACCGTGGTGGTGTACGGGAATACC TTCCTCAACGACTGGACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MERLRTVNYPAGSIEVLVAEGCSPSRQRNRAAAMAKGKLVYFLDDDSLVDPAFLQRAVERFVDPRVAAVGGPSLTPATDT FFQRAVGLVISSPFGGGGARNRYRRTGAARPSSERELILCNLAFRRELFLAFGGLDERLYPNEENELMDRLLTDGWLLVH DPELAIYRSQRPSFRAFMRQFFGYGTGRGEQTRIAGLRHGIDFAPAFFLAYLLLLPWAPTLLWFIPLICYGALLIAAAVA AAWQGRAPAAIPLLFILFPTLHLSYGAGLLKGVLRPRFAQSQTEPPAVAVRVIKELGMPWAAAGVARADNDGRLTP
Sequences:
>Translated_316_residues MERLRTVNYPAGSIEVLVAEGCSPSRQRNRAAAMAKGKLVYFLDDDSLVDPAFLQRAVERFVDPRVAAVGGPSLTPATDT FFQRAVGLVISSPFGGGGARNRYRRTGAARPSSERELILCNLAFRRELFLAFGGLDERLYPNEENELMDRLLTDGWLLVH DPELAIYRSQRPSFRAFMRQFFGYGTGRGEQTRIAGLRHGIDFAPAFFLAYLLLLPWAPTLLWFIPLICYGALLIAAAVA AAWQGRAPAAIPLLFILFPTLHLSYGAGLLKGVLRPRFAQSQTEPPAVAVRVIKELGMPWAAAGVARADNDGRLTP >Mature_316_residues MERLRTVNYPAGSIEVLVAEGCSPSRQRNRAAAMAKGKLVYFLDDDSLVDPAFLQRAVERFVDPRVAAVGGPSLTPATDT FFQRAVGLVISSPFGGGGARNRYRRTGAARPSSERELILCNLAFRRELFLAFGGLDERLYPNEENELMDRLLTDGWLLVH DPELAIYRSQRPSFRAFMRQFFGYGTGRGEQTRIAGLRHGIDFAPAFFLAYLLLLPWAPTLLWFIPLICYGALLIAAAVA AAWQGRAPAAIPLLFILFPTLHLSYGAGLLKGVLRPRFAQSQTEPPAVAVRVIKELGMPWAAAGVARADNDGRLTP
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the second sugar (glucose). Catalyzes the formation of a beta-1,3 linkage with the galactose lipid carrier [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34762; Mature: 34762
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLRTVNYPAGSIEVLVAEGCSPSRQRNRAAAMAKGKLVYFLDDDSLVDPAFLQRAVER CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH FVDPRVAAVGGPSLTPATDTFFQRAVGLVISSPFGGGGARNRYRRTGAARPSSERELILC HCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEE NLAFRRELFLAFGGLDERLYPNEENELMDRLLTDGWLLVHDPELAIYRSQRPSFRAFMRQ HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCEEEEECCCCHHHHHHHH FFGYGTGRGEQTRIAGLRHGIDFAPAFFLAYLLLLPWAPTLLWFIPLICYGALLIAAAVA HHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAWQGRAPAAIPLLFILFPTLHLSYGAGLLKGVLRPRFAQSQTEPPAVAVRVIKELGMPW HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCH AAAGVARADNDGRLTP HHHCCCCCCCCCCCCC >Mature Secondary Structure MERLRTVNYPAGSIEVLVAEGCSPSRQRNRAAAMAKGKLVYFLDDDSLVDPAFLQRAVER CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH FVDPRVAAVGGPSLTPATDTFFQRAVGLVISSPFGGGGARNRYRRTGAARPSSERELILC HCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEE NLAFRRELFLAFGGLDERLYPNEENELMDRLLTDGWLLVHDPELAIYRSQRPSFRAFMRQ HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCEEEEECCCCHHHHHHHH FFGYGTGRGEQTRIAGLRHGIDFAPAFFLAYLLLLPWAPTLLWFIPLICYGALLIAAAVA HHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAWQGRAPAAIPLLFILFPTLHLSYGAGLLKGVLRPRFAQSQTEPPAVAVRVIKELGMPW HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCH AAAGVARADNDGRLTP HHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]