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The map label for this gene is 78224089

Identifier: 78224089

GI number: 78224089

Start: 3273447

End: 3274940

Strand: Reverse

Name: 78224089

Synonym: Gmet_2893

Alternate gene names: NA

Gene position: 3274940-3273447 (Counterclockwise)

Preceding gene: 78224090

Following gene: 78224088

Centisome position: 81.93

GC content: 58.84

Gene sequence:

>1494_bases
TTGACAGGGATCAGGAAGAGAACGGTCCTGCTGTTCTTCCTTGCGACGACCGTGGTGGTGTACGGGAATACCTTCCTCAA
CGACTGGACCTATGACGATGTGCCGGTCATTGTGCAAAACCCCGACGCCCATTCCCTTAAAGGCTTTGTTGAGAATAGTC
GCCCCGGTCGTCCCCTGCGGGAACTGACCTATATCCCGGAGTATCACCTGTTCGGTGAAAAGCCGGCGGGGTACCGGGTT
CAGCAGCTCGCCTGGCACGGGATGAACGGTTTTCTTCTGGTTCTGGTCTTTGGACTGCTCGGGGTCGAACTCCCGTACGC
CCTGTTGGGTGCTCTTTTCTTCCTCGTACACCCCCTCCAGTCCGAATCGGTTGCGAATCTTTCGCACCGCAAGGAACTCC
TGACGCTCTTCTTCTCCTTGGTTTCGCTCTACGGGTATGTGAAGGCTGCCGCTTTGGCCGGTGGACGGCGGGTGGCGTTT
ATGGCCGTTGCCGTTGCAGGCTATGTCGTTGCGCTCCTTGCCAACGAGACGGTGATTACCCTTCCCCTGCTCGTCATTCT
CGTGGAGTGTTACGGGATGCCACGGGAACGGCGAATTCTCCTCCGTCGCCCCCTGCTTCTTGCCGTGTCCGGAGCCATTG
CCGCGGCGTATCTGCTGTACACGTTCCGAGGGTTCATCCGGCCCGAGCAGCTCCTGACCATTTACTCTAAGAACAGTTTC
ATGGCTTCCCGAAGCTACCTTCCCCTTTTTATGGGGTCGATGACGGCATTCGGGTTCTATCTCTGGAAGATCGTCCTCCC
CGTGGGGCTTGCCCCTGAATACACGTTCCGGCTGGCAGAGAGTTTCCTGCAACCGTGGGCGCTTCTTTCCGGTACACTCC
TTGTCGTGCTGGTGACCGTGATGGTGCGGGCGGCCCGCCGCCTTCCCCTTCTGTCGCTGGGGATCGGCTGGTTTTTCGTG
TTTTGGTTGCCGGTGTCAAACCTCGTGCCGGTTGCCTATTTGGCTGCCGACAGGTATATGTATCTCTGCCTTCCCGGTGT
CGGCCTCGCCCTAGCCGTGCTGCTCCAGAGACTGAGAAGCGCGAAGGTTGAGGCAGGCTTTTGTGCCGTTTTGCTCGTCC
TCGCCGTTCTCACCGCCATCCAGAACGGATACTGGCGCACCGAGCATACCCTCTGGCGCCATGCTGTCGCGGTGAATCCA
GATTCGACCTGGGTTCAGGAGACTGTTGCCCTGAGCTATCTCCTGACGGACGAAACTGACAAGGCCGTTGCCCATGCACG
GGAGGCAATACGGCTGAACCGCCTCAATACCCGGGCGTATCTGACGCTGGCAAAGGCGGAGGAACGTCGGGGCAATCTGG
CTGAGGCGGTGAAAAACTACGAATTCTTTGCTGCGTACGGCGGCATGGAATACCCTAGCGAGGCCGCGGATGTTCAGGCA
TCTCTTCCGGCCCTGCGTGAGCGGCTTGCCTTGCAGAAGACGAATCTCCAGTGA

Upstream 100 bases:

>100_bases
CGGTGGCGGTGCGGGTGATTAAGGAGTTGGGGATGCCGTGGGCCGCCGCCGGCGTTGCGCGCGCCGACAATGACGGACGG
TTGACGCCGTGACCGGGTGT

Downstream 100 bases:

>100_bases
GGTCCTTGGTGAAACTGAGTATCGTTATACCGATTTACAACGAAGAAGAGAACATTCCCCCTCTCTATGGACGGGTTACC
GAAGCACTGGCCGGGACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTGIRKRTVLLFFLATTVVVYGNTFLNDWTYDDVPVIVQNPDAHSLKGFVENSRPGRPLRELTYIPEYHLFGEKPAGYRV
QQLAWHGMNGFLLVLVFGLLGVELPYALLGALFFLVHPLQSESVANLSHRKELLTLFFSLVSLYGYVKAAALAGGRRVAF
MAVAVAGYVVALLANETVITLPLLVILVECYGMPRERRILLRRPLLLAVSGAIAAAYLLYTFRGFIRPEQLLTIYSKNSF
MASRSYLPLFMGSMTAFGFYLWKIVLPVGLAPEYTFRLAESFLQPWALLSGTLLVVLVTVMVRAARRLPLLSLGIGWFFV
FWLPVSNLVPVAYLAADRYMYLCLPGVGLALAVLLQRLRSAKVEAGFCAVLLVLAVLTAIQNGYWRTEHTLWRHAVAVNP
DSTWVQETVALSYLLTDETDKAVAHAREAIRLNRLNTRAYLTLAKAEERRGNLAEAVKNYEFFAAYGGMEYPSEAADVQA
SLPALRERLALQKTNLQ

Sequences:

>Translated_497_residues
MTGIRKRTVLLFFLATTVVVYGNTFLNDWTYDDVPVIVQNPDAHSLKGFVENSRPGRPLRELTYIPEYHLFGEKPAGYRV
QQLAWHGMNGFLLVLVFGLLGVELPYALLGALFFLVHPLQSESVANLSHRKELLTLFFSLVSLYGYVKAAALAGGRRVAF
MAVAVAGYVVALLANETVITLPLLVILVECYGMPRERRILLRRPLLLAVSGAIAAAYLLYTFRGFIRPEQLLTIYSKNSF
MASRSYLPLFMGSMTAFGFYLWKIVLPVGLAPEYTFRLAESFLQPWALLSGTLLVVLVTVMVRAARRLPLLSLGIGWFFV
FWLPVSNLVPVAYLAADRYMYLCLPGVGLALAVLLQRLRSAKVEAGFCAVLLVLAVLTAIQNGYWRTEHTLWRHAVAVNP
DSTWVQETVALSYLLTDETDKAVAHAREAIRLNRLNTRAYLTLAKAEERRGNLAEAVKNYEFFAAYGGMEYPSEAADVQA
SLPALRERLALQKTNLQ
>Mature_496_residues
TGIRKRTVLLFFLATTVVVYGNTFLNDWTYDDVPVIVQNPDAHSLKGFVENSRPGRPLRELTYIPEYHLFGEKPAGYRVQ
QLAWHGMNGFLLVLVFGLLGVELPYALLGALFFLVHPLQSESVANLSHRKELLTLFFSLVSLYGYVKAAALAGGRRVAFM
AVAVAGYVVALLANETVITLPLLVILVECYGMPRERRILLRRPLLLAVSGAIAAAYLLYTFRGFIRPEQLLTIYSKNSFM
ASRSYLPLFMGSMTAFGFYLWKIVLPVGLAPEYTFRLAESFLQPWALLSGTLLVVLVTVMVRAARRLPLLSLGIGWFFVF
WLPVSNLVPVAYLAADRYMYLCLPGVGLALAVLLQRLRSAKVEAGFCAVLLVLAVLTAIQNGYWRTEHTLWRHAVAVNPD
STWVQETVALSYLLTDETDKAVAHAREAIRLNRLNTRAYLTLAKAEERRGNLAEAVKNYEFFAAYGGMEYPSEAADVQAS
LPALRERLALQKTNLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118766330, Length=515, Percent_Identity=25.0485436893204, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI118766328, Length=516, Percent_Identity=25.3875968992248, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25147174, Length=460, Percent_Identity=24.5652173913043, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55524; Mature: 55393

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIRKRTVLLFFLATTVVVYGNTFLNDWTYDDVPVIVQNPDAHSLKGFVENSRPGRPLR
CCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCHH
ELTYIPEYHLFGEKPAGYRVQQLAWHGMNGFLLVLVFGLLGVELPYALLGALFFLVHPLQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SESVANLSHRKELLTLFFSLVSLYGYVKAAALAGGRRVAFMAVAVAGYVVALLANETVIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH
LPLLVILVECYGMPRERRILLRRPLLLAVSGAIAAAYLLYTFRGFIRPEQLLTIYSKNSF
HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCH
MASRSYLPLFMGSMTAFGFYLWKIVLPVGLAPEYTFRLAESFLQPWALLSGTLLVVLVTV
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVRAARRLPLLSLGIGWFFVFWLPVSNLVPVAYLAADRYMYLCLPGVGLALAVLLQRLRS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
AKVEAGFCAVLLVLAVLTAIQNGYWRTEHTLWRHAVAVNPDSTWVQETVALSYLLTDETD
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCCHHHHHHHHHHHHHEECCCH
KAVAHAREAIRLNRLNTRAYLTLAKAEERRGNLAEAVKNYEFFAAYGGMEYPSEAADVQA
HHHHHHHHHHHHHCCCCHHEEEEEHHHHHCCCHHHHHHCCHHEEECCCCCCCCHHHHHHH
SLPALRERLALQKTNLQ
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGIRKRTVLLFFLATTVVVYGNTFLNDWTYDDVPVIVQNPDAHSLKGFVENSRPGRPLR
CCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCHH
ELTYIPEYHLFGEKPAGYRVQQLAWHGMNGFLLVLVFGLLGVELPYALLGALFFLVHPLQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SESVANLSHRKELLTLFFSLVSLYGYVKAAALAGGRRVAFMAVAVAGYVVALLANETVIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH
LPLLVILVECYGMPRERRILLRRPLLLAVSGAIAAAYLLYTFRGFIRPEQLLTIYSKNSF
HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCH
MASRSYLPLFMGSMTAFGFYLWKIVLPVGLAPEYTFRLAESFLQPWALLSGTLLVVLVTV
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVRAARRLPLLSLGIGWFFVFWLPVSNLVPVAYLAADRYMYLCLPGVGLALAVLLQRLRS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
AKVEAGFCAVLLVLAVLTAIQNGYWRTEHTLWRHAVAVNPDSTWVQETVALSYLLTDETD
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCCHHHHHHHHHHHHHEECCCH
KAVAHAREAIRLNRLNTRAYLTLAKAEERRGNLAEAVKNYEFFAAYGGMEYPSEAADVQA
HHHHHHHHHHHHHCCCCHHEEEEEHHHHHCCCHHHHHHCCHHEEECCCCCCCCHHHHHHH
SLPALRERLALQKTNLQ
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA