| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224091
Identifier: 78224091
GI number: 78224091
Start: 3276043
End: 3278349
Strand: Reverse
Name: 78224091
Synonym: Gmet_2895
Alternate gene names: NA
Gene position: 3278349-3276043 (Counterclockwise)
Preceding gene: 78224092
Following gene: 78224090
Centisome position: 82.01
GC content: 57.48
Gene sequence:
>2307_bases ATGGAGAAGGCAAGCCCGTCTCCATCGGTTCTGTCAAACGATCGTTTTCGGCCCGGCTCCCCTCTGTGCCGGGCCGTTTT TCCCCTTGTCCCCGTTTCGGTACCTGGTAGAGTCATGATTCGTCGCTCGCTCCTCATAACGTTTCTGCTGATGTCTGCGG TGCTGCTGCAGGCGTCCCGCGCGTCGGCGCGGCTGCGGGGCGATATAGAGCTGAACTATGTCTCCTACGAGGCGCAGGAA AAGGGGACGACGGTAACCGACGCCCATACCTTCAGCCAGCGCTATTCAGTGCTGTACGAAAAGAGCGGCGAACTGTACAG CGACCGCTTCGGCTTTTACAACGGCGCCCTCGGCTACGAGTGGGCCTCCTTCGATTCACGGGTCTACAACGCGGCGGACA ACGCCACGTGGAAACCTTCGACGAGCGCCGGCAAGATCCTGTTCAACGGTGAACTGGTGCTGGATCCGGCCGAGCTTCCC CTGAAGCTCAAGGCTTACTCCCGCGACATGACCACCTCGACGTTCACCATGGATTCTCTGCTGACCGAGGGGAGGAGTGG GCGGATTTTCGAGCCGAACATCATTACCTCCCTGAACGGCACCGGGACCAACACCCTCACCGGGGCAACGATGGTATTGG GTGTCAAAAACGGCCTCACCAACGGCTATAACGCCATTTTTCGTCACATCCCCATGGTGCTCCTGGATTATCGGGACGAG CGGCACGAGGATTCGAGAAGCATCACGCCGGTCGACACCCGGTTGCGCAAGCTTGCCTTTGTCAGCCTCAACAAGCGCGA CAACTGGTTCCACTACCGGACCACCCGCTTCGATGACTACATCAACCCGGGCCAGAGCTACCAGGAGAGCCAGGTGCAGT TGGGGACCGTGGACCACACGCTCCAGCGCCGCTGGATCGACCTCACCAACTGGCTCAAGATCTCCACTGATTTCCAGTAC ACCAAGCGGTCTGCCAGTCATAACGATGCCTATGACGTGAACTTTTTTGCCATGGCCCAGCGTAAGAACTGGGACGCCAG GAGTTTTCTCACCTTCTCCCGGGAGCGCGAGGGCAACGAGATCCGCCTGGAGAGAAACATCCCCCTCTACCTGTCGGGGG CGTTCGGCATGGATTCCAGTTGGAATGCGTCGGTTACCCGGCGCGACCGTGAGGTAAAGCAGAACCGCCTGACAACGACG ATCGACAACAACACCAGTGCCATGTTCCGGCTGGAGAGCTTCAAACGGTCTCCCTTTACCCTTTCCCAACGGTATACGGT CGAGGATGCCGAATCCAACGGGACAAAGACCCTGGGACTGGAAGCCCTGCTGGAGACCATGAGCACGAGACGCTTTTCCG ACCAATTTACCGTGGGGGGGAGCTACAATATCCGCTATCTCGATTCCGAGAGGGAGGGGGCGTCAAGCTATCTCTTCCAG AACGCCAGGGGACGGCTCGGTTACCGGGTAAACCCGCAACTGACCTTGAACCTCGATGAATCCGTGACCGCGGTGCGGGG CAACAGCGCGGCACTGACTGACAGCTACTCAATCACTACCCAGACCAACTTCGGCAACTCAAACGATGTGTTCCGCCGTG AGGAGCAGCCCAATGACTATTACCGCTCCGTCACCACTGCCGGCCTCTCCTGGCTCCCGCTTTCGCGGTTAACCGTCTCC CTGACTGCTACCGAAGATGTTCTCGTGAGTTCACAGGCCACTACGGACTACCTGACCACGGTTAGCAACCGGGTTGACTA CACCCTTGACAACCTGCGCTTGAACATGGAAAATCGCGTCTCTCTGCGCAGCAATGCCGATGGCCGCTCAACCGATCTGC AGCACACCGGCAGTGCCCAGTATACGCCGAACCGCTCCCTTGACGCCCTGGTGCGCTATATGATTTACAAACGGGACGAA AAGGGAAACAACTCCACCTATGTGGATCTGATGCAGAGGCTTACCTATTCGTTTTATCAGTTGGGCGGCCAGCAGCGTAA ACTTCTGGAGCTGACCGAAGAGTTCACCATATCCCAGAGCGACACGATTTCGTCAACGTCAACGACCACGGGGAGGAAGC GCTTCCTGCTCGGCGCCCGGTATTATCCGCTCCGAAACCTGTACCTTGGCGGCAATGTCGCTTATTCGCTCTTGCTGCCA AGAAACGCCCCTGAATTCATCTACAACGGTTATGTGGGGCTCAATTTCCGCAAGTTTCAGTTCAATATCGACTACAGTTA CGGAAAACGCAAGGATGATGAACGGGTCGAGAAGCGCCTGATGGCCTCCATGAAAAAGTCGTTCTGA
Upstream 100 bases:
>100_bases AGACAAACACTACCTATAACTATCCCAAGTTCCTCCGTTCCACCATGGCGGGGAGCGCCCTCTGCCTCGGGTGCCATATC AAGTAGGTTGTGACGAGCCG
Downstream 100 bases:
>100_bases CCGGCTGCCGGACAGGCCATTTCGCATCAAACGTCATGACCGGGATCTCCCGGTTTTTGTGTTTTTCAAGGCATTCAAGG ATGAATGATAATCAGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 768; Mature: 768
Protein sequence:
>768_residues MEKASPSPSVLSNDRFRPGSPLCRAVFPLVPVSVPGRVMIRRSLLITFLLMSAVLLQASRASARLRGDIELNYVSYEAQE KGTTVTDAHTFSQRYSVLYEKSGELYSDRFGFYNGALGYEWASFDSRVYNAADNATWKPSTSAGKILFNGELVLDPAELP LKLKAYSRDMTTSTFTMDSLLTEGRSGRIFEPNIITSLNGTGTNTLTGATMVLGVKNGLTNGYNAIFRHIPMVLLDYRDE RHEDSRSITPVDTRLRKLAFVSLNKRDNWFHYRTTRFDDYINPGQSYQESQVQLGTVDHTLQRRWIDLTNWLKISTDFQY TKRSASHNDAYDVNFFAMAQRKNWDARSFLTFSREREGNEIRLERNIPLYLSGAFGMDSSWNASVTRRDREVKQNRLTTT IDNNTSAMFRLESFKRSPFTLSQRYTVEDAESNGTKTLGLEALLETMSTRRFSDQFTVGGSYNIRYLDSEREGASSYLFQ NARGRLGYRVNPQLTLNLDESVTAVRGNSAALTDSYSITTQTNFGNSNDVFRREEQPNDYYRSVTTAGLSWLPLSRLTVS LTATEDVLVSSQATTDYLTTVSNRVDYTLDNLRLNMENRVSLRSNADGRSTDLQHTGSAQYTPNRSLDALVRYMIYKRDE KGNNSTYVDLMQRLTYSFYQLGGQQRKLLELTEEFTISQSDTISSTSTTTGRKRFLLGARYYPLRNLYLGGNVAYSLLLP RNAPEFIYNGYVGLNFRKFQFNIDYSYGKRKDDERVEKRLMASMKKSF
Sequences:
>Translated_768_residues MEKASPSPSVLSNDRFRPGSPLCRAVFPLVPVSVPGRVMIRRSLLITFLLMSAVLLQASRASARLRGDIELNYVSYEAQE KGTTVTDAHTFSQRYSVLYEKSGELYSDRFGFYNGALGYEWASFDSRVYNAADNATWKPSTSAGKILFNGELVLDPAELP LKLKAYSRDMTTSTFTMDSLLTEGRSGRIFEPNIITSLNGTGTNTLTGATMVLGVKNGLTNGYNAIFRHIPMVLLDYRDE RHEDSRSITPVDTRLRKLAFVSLNKRDNWFHYRTTRFDDYINPGQSYQESQVQLGTVDHTLQRRWIDLTNWLKISTDFQY TKRSASHNDAYDVNFFAMAQRKNWDARSFLTFSREREGNEIRLERNIPLYLSGAFGMDSSWNASVTRRDREVKQNRLTTT IDNNTSAMFRLESFKRSPFTLSQRYTVEDAESNGTKTLGLEALLETMSTRRFSDQFTVGGSYNIRYLDSEREGASSYLFQ NARGRLGYRVNPQLTLNLDESVTAVRGNSAALTDSYSITTQTNFGNSNDVFRREEQPNDYYRSVTTAGLSWLPLSRLTVS LTATEDVLVSSQATTDYLTTVSNRVDYTLDNLRLNMENRVSLRSNADGRSTDLQHTGSAQYTPNRSLDALVRYMIYKRDE KGNNSTYVDLMQRLTYSFYQLGGQQRKLLELTEEFTISQSDTISSTSTTTGRKRFLLGARYYPLRNLYLGGNVAYSLLLP RNAPEFIYNGYVGLNFRKFQFNIDYSYGKRKDDERVEKRLMASMKKSF >Mature_768_residues MEKASPSPSVLSNDRFRPGSPLCRAVFPLVPVSVPGRVMIRRSLLITFLLMSAVLLQASRASARLRGDIELNYVSYEAQE KGTTVTDAHTFSQRYSVLYEKSGELYSDRFGFYNGALGYEWASFDSRVYNAADNATWKPSTSAGKILFNGELVLDPAELP LKLKAYSRDMTTSTFTMDSLLTEGRSGRIFEPNIITSLNGTGTNTLTGATMVLGVKNGLTNGYNAIFRHIPMVLLDYRDE RHEDSRSITPVDTRLRKLAFVSLNKRDNWFHYRTTRFDDYINPGQSYQESQVQLGTVDHTLQRRWIDLTNWLKISTDFQY TKRSASHNDAYDVNFFAMAQRKNWDARSFLTFSREREGNEIRLERNIPLYLSGAFGMDSSWNASVTRRDREVKQNRLTTT IDNNTSAMFRLESFKRSPFTLSQRYTVEDAESNGTKTLGLEALLETMSTRRFSDQFTVGGSYNIRYLDSEREGASSYLFQ NARGRLGYRVNPQLTLNLDESVTAVRGNSAALTDSYSITTQTNFGNSNDVFRREEQPNDYYRSVTTAGLSWLPLSRLTVS LTATEDVLVSSQATTDYLTTVSNRVDYTLDNLRLNMENRVSLRSNADGRSTDLQHTGSAQYTPNRSLDALVRYMIYKRDE KGNNSTYVDLMQRLTYSFYQLGGQQRKLLELTEEFTISQSDTISSTSTTTGRKRFLLGARYYPLRNLYLGGNVAYSLLLP RNAPEFIYNGYVGLNFRKFQFNIDYSYGKRKDDERVEKRLMASMKKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87659; Mature: 87659
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKASPSPSVLSNDRFRPGSPLCRAVFPLVPVSVPGRVMIRRSLLITFLLMSAVLLQASR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASARLRGDIELNYVSYEAQEKGTTVTDAHTFSQRYSVLYEKSGELYSDRFGFYNGALGYE CCCEEECCEEEEEEEEEHHCCCCEEECHHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCE WASFDSRVYNAADNATWKPSTSAGKILFNGELVLDPAELPLKLKAYSRDMTTSTFTMDSL ECCCCCHHEECCCCCCCCCCCCCCEEEECCEEEECCCCCCEEEEECCCCCCCHHEEHHHH LTEGRSGRIFEPNIITSLNGTGTNTLTGATMVLGVKNGLTNGYNAIFRHIPMVLLDYRDE HHCCCCCCEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEECCHH RHEDSRSITPVDTRLRKLAFVSLNKRDNWFHYRTTRFDDYINPGQSYQESQVQLGTVDHT CCCCCCCCCHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECHHHH LQRRWIDLTNWLKISTDFQYTKRSASHNDAYDVNFFAMAQRKNWDARSFLTFSREREGNE HHHHHHCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHEEEHHCCCCCE IRLERNIPLYLSGAFGMDSSWNASVTRRDREVKQNRLTTTIDNNTSAMFRLESFKRSPFT EEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHCCCCCE LSQRYTVEDAESNGTKTLGLEALLETMSTRRFSDQFTVGGSYNIRYLDSEREGASSYLFQ ECCEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHH NARGRLGYRVNPQLTLNLDESVTAVRGNSAALTDSYSITTQTNFGNSNDVFRREEQPNDY CCCCCCCEEECCEEEEECCCCEEEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCHH YRSVTTAGLSWLPLSRLTVSLTATEDVLVSSQATTDYLTTVSNRVDYTLDNLRLNMENRV HHHHHHCCCCEEECCCEEEEEEECCCEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCE SLRSNADGRSTDLQHTGSAQYTPNRSLDALVRYMIYKRDEKGNNSTYVDLMQRLTYSFYQ EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LGGQQRKLLELTEEFTISQSDTISSTSTTTGRKRFLLGARYYPLRNLYLGGNVAYSLLLP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEECCCEEEEECCCEEEEEEEC RNAPEFIYNGYVGLNFRKFQFNIDYSYGKRKDDERVEKRLMASMKKSF CCCCCHHCCCEEECEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKASPSPSVLSNDRFRPGSPLCRAVFPLVPVSVPGRVMIRRSLLITFLLMSAVLLQASR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASARLRGDIELNYVSYEAQEKGTTVTDAHTFSQRYSVLYEKSGELYSDRFGFYNGALGYE CCCEEECCEEEEEEEEEHHCCCCEEECHHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCE WASFDSRVYNAADNATWKPSTSAGKILFNGELVLDPAELPLKLKAYSRDMTTSTFTMDSL ECCCCCHHEECCCCCCCCCCCCCCEEEECCEEEECCCCCCEEEEECCCCCCCHHEEHHHH LTEGRSGRIFEPNIITSLNGTGTNTLTGATMVLGVKNGLTNGYNAIFRHIPMVLLDYRDE HHCCCCCCEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEECCHH RHEDSRSITPVDTRLRKLAFVSLNKRDNWFHYRTTRFDDYINPGQSYQESQVQLGTVDHT CCCCCCCCCHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECHHHH LQRRWIDLTNWLKISTDFQYTKRSASHNDAYDVNFFAMAQRKNWDARSFLTFSREREGNE HHHHHHCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHEEEHHCCCCCE IRLERNIPLYLSGAFGMDSSWNASVTRRDREVKQNRLTTTIDNNTSAMFRLESFKRSPFT EEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHCCCCCE LSQRYTVEDAESNGTKTLGLEALLETMSTRRFSDQFTVGGSYNIRYLDSEREGASSYLFQ ECCEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHH NARGRLGYRVNPQLTLNLDESVTAVRGNSAALTDSYSITTQTNFGNSNDVFRREEQPNDY CCCCCCCEEECCEEEEECCCCEEEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCHH YRSVTTAGLSWLPLSRLTVSLTATEDVLVSSQATTDYLTTVSNRVDYTLDNLRLNMENRV HHHHHHCCCCEEECCCEEEEEEECCCEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCCE SLRSNADGRSTDLQHTGSAQYTPNRSLDALVRYMIYKRDEKGNNSTYVDLMQRLTYSFYQ EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LGGQQRKLLELTEEFTISQSDTISSTSTTTGRKRFLLGARYYPLRNLYLGGNVAYSLLLP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEECCCEEEEECCCEEEEEEEC RNAPEFIYNGYVGLNFRKFQFNIDYSYGKRKDDERVEKRLMASMKKSF CCCCCHHCCCEEECEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA