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The map label for this gene is yicO [C]

Identifier: 78223911

GI number: 78223911

Start: 3066802

End: 3068112

Strand: Reverse

Name: yicO [C]

Synonym: Gmet_2715

Alternate gene names: 78223911

Gene position: 3068112-3066802 (Counterclockwise)

Preceding gene: 78223912

Following gene: 78223909

Centisome position: 76.75

GC content: 64.15

Gene sequence:

>1311_bases
ATGAAAACTATCGCTTCGTTCTTCCGTTTCGACCACTACCGTACCAGCTTCCGGAAGGAGACCGTGGCCGGGATCACCAC
GTTCCTGACCATGGCCTACATCATCATCGTGAACCCGGCCATACTGGAGGCGGGGGGGATCCCGCGGGGGCCCCAGACCA
CGGCCACCATCCTGGCCGCGGTCTTCGGCTGCGTGGTCATGGCGCTGTGGGCCAACCGACCCTTCGCCATCGCCCCCTAC
ATGAGCGAGAACGCCTTTGTCGCCTTCACGGTGGTGAAGACCCTCGGTTATACCTGGCAGACGGCCATGGGCGCGGTCTT
CGTGGCCGGCATCGTCTTTTCCATCCTCACGGTCTTCAGGGTCCGGAGCTGGCTGGCGGAGGCGATCCCCCTCTCCCTCA
AGTGCGCCTTTGCCGTGGGGATAGGCCTCTTCCTCACCTTCATCGGCCTCAATGAGACCGGCCTCGTCACCCTGGGGGTT
GCCGGGGCGCCGGTGAAGATGGGGAACATTGCCGCGCCGTCGGTGCTCCTGGCGGTCTTCGGCTACCTTCTTACCGTCTT
CCTTATGACGCGGCAGGTCCGCGGGGCCATTGTGATCGGCATCGTGGCCACCACAACCCTCTCCATCGCCTTTGGCGTGA
CCCCCATGCCGAAGGAGTTCGTGAGCCTCCCCCCCGACATCTCGCCGATCCTCTTCCAGCTGGATATCGGGAGCGTCTTC
GAGATCCGTTTCTTTCCGGTGGTCCTCACCATTTTCATCATGGCGTTCCTGGACACGGTGGGGACCCTCATCGGCCTCTC
CATGCGGGCCGACCTCCTGGACGAGCACGGGAACCTCCCCGAGATCGAGAAGCCGATGCTGGCCGACGCCTTGGCCACCA
CCGTGGCGCCGCTTTTGGGAACCACCACCACCGGCGCCTACATCGAGTCGGCCGCCGGCATCGAGGAGGGGGGGCGCACC
GGTTTCACGGCCCTCGTCGTGGCGGGGCTCTTCCTCCTGGCCCTCTTCTTCGCTCCGCTGTTCACCATCGTCCCCTCCCA
CGCCTACGGCATTGCCCTCATCGTCATCGGCTCCTTCATGATCGAGCCCATCAAGCGGATCGCATTCGACGACTTCACCG
AGCTGGTTCCCGCCTTCCTCACCATCGTCCTCATGATTTTCACCTACAACATCGGCGTCGGCATGAGCACGGGGCTCCTC
ACCTATCCGCTCCTCAAGGCCGCAGCCGGCCGGGGGCGCGAGGTGCCGGCCGGCATGTGGGTGCTGGCGCTCCTGGCGGT
GTCGCTCTTTGTGTTCTTTCCTAAGATGTGA

Upstream 100 bases:

>100_bases
CTGAAACGCGGCACCGGCCCCTCACCCCCAACCCCTCTCCCCGGGGGAGAGGGTGGCCGCAAGGCCGGGTGAGGGGAATT
GTTCGGGGTTTTTTTCATAC

Downstream 100 bases:

>100_bases
ACAGACAACGCAAAAAGGCCCGCCAAGTGCGGGCCTTTAAGTTTTGGAGAGTCATGGTGCTGTCGCGTGTGGCAGTCTCG
GAGGATTCCCTCAGGCTTTA

Product: xanthine/uracil/vitamin C permease:sulphate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MKTIASFFRFDHYRTSFRKETVAGITTFLTMAYIIIVNPAILEAGGIPRGPQTTATILAAVFGCVVMALWANRPFAIAPY
MSENAFVAFTVVKTLGYTWQTAMGAVFVAGIVFSILTVFRVRSWLAEAIPLSLKCAFAVGIGLFLTFIGLNETGLVTLGV
AGAPVKMGNIAAPSVLLAVFGYLLTVFLMTRQVRGAIVIGIVATTTLSIAFGVTPMPKEFVSLPPDISPILFQLDIGSVF
EIRFFPVVLTIFIMAFLDTVGTLIGLSMRADLLDEHGNLPEIEKPMLADALATTVAPLLGTTTTGAYIESAAGIEEGGRT
GFTALVVAGLFLLALFFAPLFTIVPSHAYGIALIVIGSFMIEPIKRIAFDDFTELVPAFLTIVLMIFTYNIGVGMSTGLL
TYPLLKAAAGRGREVPAGMWVLALLAVSLFVFFPKM

Sequences:

>Translated_436_residues
MKTIASFFRFDHYRTSFRKETVAGITTFLTMAYIIIVNPAILEAGGIPRGPQTTATILAAVFGCVVMALWANRPFAIAPY
MSENAFVAFTVVKTLGYTWQTAMGAVFVAGIVFSILTVFRVRSWLAEAIPLSLKCAFAVGIGLFLTFIGLNETGLVTLGV
AGAPVKMGNIAAPSVLLAVFGYLLTVFLMTRQVRGAIVIGIVATTTLSIAFGVTPMPKEFVSLPPDISPILFQLDIGSVF
EIRFFPVVLTIFIMAFLDTVGTLIGLSMRADLLDEHGNLPEIEKPMLADALATTVAPLLGTTTTGAYIESAAGIEEGGRT
GFTALVVAGLFLLALFFAPLFTIVPSHAYGIALIVIGSFMIEPIKRIAFDDFTELVPAFLTIVLMIFTYNIGVGMSTGLL
TYPLLKAAAGRGREVPAGMWVLALLAVSLFVFFPKM
>Mature_436_residues
MKTIASFFRFDHYRTSFRKETVAGITTFLTMAYIIIVNPAILEAGGIPRGPQTTATILAAVFGCVVMALWANRPFAIAPY
MSENAFVAFTVVKTLGYTWQTAMGAVFVAGIVFSILTVFRVRSWLAEAIPLSLKCAFAVGIGLFLTFIGLNETGLVTLGV
AGAPVKMGNIAAPSVLLAVFGYLLTVFLMTRQVRGAIVIGIVATTTLSIAFGVTPMPKEFVSLPPDISPILFQLDIGSVF
EIRFFPVVLTIFIMAFLDTVGTLIGLSMRADLLDEHGNLPEIEKPMLADALATTVAPLLGTTTTGAYIESAAGIEEGGRT
GFTALVVAGLFLLALFFAPLFTIVPSHAYGIALIVIGSFMIEPIKRIAFDDFTELVPAFLTIVLMIFTYNIGVGMSTGLL
TYPLLKAAAGRGREVPAGMWVLALLAVSLFVFFPKM

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=423, Percent_Identity=38.0614657210402, Blast_Score=305, Evalue=4e-84,
Organism=Escherichia coli, GI1790150, Length=427, Percent_Identity=38.4074941451991, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1790499, Length=436, Percent_Identity=32.7981651376147, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI48994909, Length=401, Percent_Identity=33.1670822942643, Blast_Score=211, Evalue=9e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46660; Mature: 46660

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIASFFRFDHYRTSFRKETVAGITTFLTMAYIIIVNPAILEAGGIPRGPQTTATILAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHH
VFGCVVMALWANRPFAIAPYMSENAFVAFTVVKTLGYTWQTAMGAVFVAGIVFSILTVFR
HHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VRSWLAEAIPLSLKCAFAVGIGLFLTFIGLNETGLVTLGVAGAPVKMGNIAAPSVLLAVF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHHHHHH
GYLLTVFLMTRQVRGAIVIGIVATTTLSIAFGVTPMPKEFVSLPPDISPILFQLDIGSVF
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCH
EIRFFPVVLTIFIMAFLDTVGTLIGLSMRADLLDEHGNLPEIEKPMLADALATTVAPLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
TTTTGAYIESAAGIEEGGRTGFTALVVAGLFLLALFFAPLFTIVPSHAYGIALIVIGSFM
CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IEPIKRIAFDDFTELVPAFLTIVLMIFTYNIGVGMSTGLLTYPLLKAAAGRGREVPAGMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
VLALLAVSLFVFFPKM
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTIASFFRFDHYRTSFRKETVAGITTFLTMAYIIIVNPAILEAGGIPRGPQTTATILAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHH
VFGCVVMALWANRPFAIAPYMSENAFVAFTVVKTLGYTWQTAMGAVFVAGIVFSILTVFR
HHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VRSWLAEAIPLSLKCAFAVGIGLFLTFIGLNETGLVTLGVAGAPVKMGNIAAPSVLLAVF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHHHHHH
GYLLTVFLMTRQVRGAIVIGIVATTTLSIAFGVTPMPKEFVSLPPDISPILFQLDIGSVF
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCH
EIRFFPVVLTIFIMAFLDTVGTLIGLSMRADLLDEHGNLPEIEKPMLADALATTVAPLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
TTTTGAYIESAAGIEEGGRTGFTALVVAGLFLLALFFAPLFTIVPSHAYGIALIVIGSFM
CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IEPIKRIAFDDFTELVPAFLTIVLMIFTYNIGVGMSTGLLTYPLLKAAAGRGREVPAGMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
VLALLAVSLFVFFPKM
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]