| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is resA [H]
Identifier: 78223655
GI number: 78223655
Start: 2775127
End: 2775639
Strand: Reverse
Name: resA [H]
Synonym: Gmet_2452
Alternate gene names: 78223655
Gene position: 2775639-2775127 (Counterclockwise)
Preceding gene: 78223656
Following gene: 78223654
Centisome position: 69.44
GC content: 58.87
Gene sequence:
>513_bases ATGAGAAAGATTTTCCTGATTCTGCCGATCTTGTTCCTGTTGGCCCTTACGGGATGCTCAAAAGAGTCGAAGCCTCCCGT CGAGGAGAACCCTGCCCCCGATTTCACCCTGAACACCCTGAACGGCGAGGTGGTGAAGCTCTCCGACCTGAAAGGCCAGG TGGTGATCGTGAACTTCTGGGCCACCTGGTGCCCCCCCTGCCGCGAGGAGATTCCCTCCATGATGCGGCTCAACGCGGCC ATGGCCGGGAAACCGTTCCGGATGCTCTGCGTCTCCATCGATGAGGGGGGGAAGGTGGCGGTGGAGGAGTTCTTCCGCAA GACCGGTTTCACTCTGCCGGTGCTTCTGGATGCCGACAAGCGGGTCGGCAAACTCTACGGCACAACGGGTGTCCCCGAGA CTTTTGTCATCGACCGCCATGGTGTTATACTCAAAAAGGTCGTCGGCGCCATGGAGTGGGACCACCCCGAGGTGATCGCC TTCCTGAACAACGAACTTAGCAAAGCGAGATAG
Upstream 100 bases:
>100_bases ACTGGAACCAGAGTTCGGCGGCGCGCTTTCTGCGCATACCGCGTCATACCCTCATCTACCGCATGGAGAAATACTCCATC ACAACGCCGGAGAGAAAAAA
Downstream 100 bases:
>100_bases CAAGTAGCAAGTAGCAAGTAGTCAAAATAGCTACTTCACTACTTCACTACCTCGCTACCTCACTACCTCACTACCTCGCT ATCTCGCTATCTCGCTATCT
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRKIFLILPILFLLALTGCSKESKPPVEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAA MAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIA FLNNELSKAR
Sequences:
>Translated_170_residues MRKIFLILPILFLLALTGCSKESKPPVEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAA MAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIA FLNNELSKAR >Mature_170_residues MRKIFLILPILFLLALTGCSKESKPPVEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAA MAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIA FLNNELSKAR
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788523, Length=168, Percent_Identity=27.3809523809524, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18931; Mature: 18931
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIFLILPILFLLALTGCSKESKPPVEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFW CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEC ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADK CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCC RVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKAR HHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRKIFLILPILFLLALTGCSKESKPPVEENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFW CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEC ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADK CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCC RVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKAR HHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715; 12637552 [H]