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The map label for this gene is yloC [H]

Identifier: 78223531

GI number: 78223531

Start: 2635430

End: 2636308

Strand: Reverse

Name: yloC [H]

Synonym: Gmet_2328

Alternate gene names: 78223531

Gene position: 2636308-2635430 (Counterclockwise)

Preceding gene: 78223532

Following gene: 78223530

Centisome position: 65.95

GC content: 64.05

Gene sequence:

>879_bases
ATGATCAAGAGTATGACCGGCTACGGCAAGGCCGTGGTCGAAACGGAAACAGGGCGGACCACCGTCGAGATACGGTCGGT
GAACCACCGCTACGGCGAGGTCTTCGTCAAGATGCCCCGCTCGTTCCTGGCCTTCGAGAATGACGTGCGCAAGGCCGTGG
GGGACCGTCTGAAGCGGGGAAAGATCGAAGTCTTCGTGCAGCGTGAGGAGGGAGTTGGCGGTCAGAATCAGCCGCTGGTG
AACCTTCCCCTGGCACGGGCCTACCGTGATGCGTTCGAGCGGATGCGGTCCGAACTTGGTCTGGCTGATCCGGTGACCCT
GCCGCTCCTCCTCTCCCAGCGGGACGTCCTGGCTGCCCGGGAGGAGGGGGCCGATGAGGATATCCTCCGGGGCGAGCTTC
TCCAGGCGGTTCGTGGCGCGGTGGAGGCCATGGAGGCCATGAGGATGCGCGAAGGCGAAGCGCTCCTGGCCGATCTCAGG
GACCGCCGCCAGACCCTTGCGACGCTCATTGACCGGGTGGCCGAGCGTGCACCCGCCGTGGTCGCTGACTATGCCCAGAA
GCTGCGGGAGCGGCTTGCGCAGCTTCTCGCCGATACGACCCTCGACGAAGCGCGGCTCGCCCAGGAGGTGGCGCTACTGG
CCGACCGGTGCGATGTTACCGAGGAGTTGGTCCGTTTCCGGAGCCACCTGATCCAGTTCGACGAGACCCTTGCCCTTGCG
GAGCCGGTGGGGCGCAAGCTGGATTTCCTCATGCAGGAGCTGAACCGCGAGGTCAATACCATCGGGTCCAAGGCCAATGA
CGCCGCCATGGCCGCCATCGTGGTTGAACTGAAGGCCGAACTGGAAAAGATCCGTGAACAGGTACAGAACATAGAATAG

Upstream 100 bases:

>100_bases
GCCAGGACGGTCCTCGGCTGGACCCCGCACTATGACGATCTTGAAACCATTGTCGCCGATGCGTGGCGATGGGAAGCTAA
ACTCAACAAACGGTGATTCT

Downstream 100 bases:

>100_bases
GGGCCACGGGCGGGGAACCAGGGACCAGGAAAGTGTCGTTGGATTTCACTGGTCCCCGGTCCCCGGTCCCTGGTCCCCGG
GGTTACCATGAAACGCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIKSMTGYGKAVVETETGRTTVEIRSVNHRYGEVFVKMPRSFLAFENDVRKAVGDRLKRGKIEVFVQREEGVGGQNQPLV
NLPLARAYRDAFERMRSELGLADPVTLPLLLSQRDVLAAREEGADEDILRGELLQAVRGAVEAMEAMRMREGEALLADLR
DRRQTLATLIDRVAERAPAVVADYAQKLRERLAQLLADTTLDEARLAQEVALLADRCDVTEELVRFRSHLIQFDETLALA
EPVGRKLDFLMQELNREVNTIGSKANDAAMAAIVVELKAELEKIREQVQNIE

Sequences:

>Translated_292_residues
MIKSMTGYGKAVVETETGRTTVEIRSVNHRYGEVFVKMPRSFLAFENDVRKAVGDRLKRGKIEVFVQREEGVGGQNQPLV
NLPLARAYRDAFERMRSELGLADPVTLPLLLSQRDVLAAREEGADEDILRGELLQAVRGAVEAMEAMRMREGEALLADLR
DRRQTLATLIDRVAERAPAVVADYAQKLRERLAQLLADTTLDEARLAQEVALLADRCDVTEELVRFRSHLIQFDETLALA
EPVGRKLDFLMQELNREVNTIGSKANDAAMAAIVVELKAELEKIREQVQNIE
>Mature_292_residues
MIKSMTGYGKAVVETETGRTTVEIRSVNHRYGEVFVKMPRSFLAFENDVRKAVGDRLKRGKIEVFVQREEGVGGQNQPLV
NLPLARAYRDAFERMRSELGLADPVTLPLLLSQRDVLAAREEGADEDILRGELLQAVRGAVEAMEAMRMREGEALLADLR
DRRQTLATLIDRVAERAPAVVADYAQKLRERLAQLLADTTLDEARLAQEVALLADRCDVTEELVRFRSHLIQFDETLALA
EPVGRKLDFLMQELNREVNTIGSKANDAAMAAIVVELKAELEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=38.1756756756757, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32796; Mature: 32796

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSMTGYGKAVVETETGRTTVEIRSVNHRYGEVFVKMPRSFLAFENDVRKAVGDRLKRG
CCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIEVFVQREEGVGGQNQPLVNLPLARAYRDAFERMRSELGLADPVTLPLLLSQRDVLAAR
CEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EEGADEDILRGELLQAVRGAVEAMEAMRMREGEALLADLRDRRQTLATLIDRVAERAPAV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VADYAQKLRERLAQLLADTTLDEARLAQEVALLADRCDVTEELVRFRSHLIQFDETLALA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EPVGRKLDFLMQELNREVNTIGSKANDAAMAAIVVELKAELEKIREQVQNIE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKSMTGYGKAVVETETGRTTVEIRSVNHRYGEVFVKMPRSFLAFENDVRKAVGDRLKRG
CCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIEVFVQREEGVGGQNQPLVNLPLARAYRDAFERMRSELGLADPVTLPLLLSQRDVLAAR
CEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EEGADEDILRGELLQAVRGAVEAMEAMRMREGEALLADLRDRRQTLATLIDRVAERAPAV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VADYAQKLRERLAQLLADTTLDEARLAQEVALLADRCDVTEELVRFRSHLIQFDETLALA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EPVGRKLDFLMQELNREVNTIGSKANDAAMAAIVVELKAELEKIREQVQNIE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]