| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is gmk
Identifier: 78223530
GI number: 78223530
Start: 2634731
End: 2635342
Strand: Reverse
Name: gmk
Synonym: Gmet_2327
Alternate gene names: 78223530
Gene position: 2635342-2634731 (Counterclockwise)
Preceding gene: 78223531
Following gene: 78223529
Centisome position: 65.93
GC content: 56.54
Gene sequence:
>612_bases ATGAAACGCGAAGGGGTTCTCTACATCATCTCGGCGCCGTCGGGGGCGGGTAAGACTACGCTCTGCAAGGAAATAATTGA CATCTTTCCGCACCTCCGGCATTCTGTCAGCTATACGACGCGGCAGCCCCGAGCCGGTGAAGTGCATGGAAAAGACTATT ATTTTATTTCCATGGACGAGTTCCGGAGCATGGTCGATAAGGGTGAGTTTGCCGAGTGGGCCGAGGTTCACGGCAACTGT TACGGTACGTCCATTCGCACCCTTGAGGAGTGCCGCATCACGGGAATCGACCTGATTCTCGATATTGACATCCAGGGCGC GCGTCAGCTCAAGGAGCGTTACGAGGGCGGCGTCTACATATTCATTCTCCCCCCCAGCTACGAGGAACTCCGTCGTCGGC TCAACGGCCGTTCCTCCGACAGCGACGATGTCATTAGCCGGCGCATTGATGCCGCTGCCGGCGAGATTCGCGAATCCCGC TGGTACGACTACATTATAGTCAACGATCAGTTCAGCCGGGCAGTAGAAGAACTCAAATCGGTCGTGGTTGCAGAGCGGTG CCGGACGTTCCGGGTTCTTGAAACGGTGACCGAACGGTTCGACATGGGCTGA
Upstream 100 bases:
>100_bases GAACATAGAATAGGGGCCACGGGCGGGGAACCAGGGACCAGGAAAGTGTCGTTGGATTTCACTGGTCCCCGGTCCCCGGT CCCTGGTCCCCGGGGTTACC
Downstream 100 bases:
>100_bases GACAGACCAGGAACCAACATCCCATAAGCACTGAGACACCGGCCGGCACAGATGCCGGTTTTTGAAAGGAGTAGCACAAT GGCACGGGTAACAGTTGAAG
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKREGVLYIISAPSGAGKTTLCKEIIDIFPHLRHSVSYTTRQPRAGEVHGKDYYFISMDEFRSMVDKGEFAEWAEVHGNC YGTSIRTLEECRITGIDLILDIDIQGARQLKERYEGGVYIFILPPSYEELRRRLNGRSSDSDDVISRRIDAAAGEIRESR WYDYIIVNDQFSRAVEELKSVVVAERCRTFRVLETVTERFDMG
Sequences:
>Translated_203_residues MKREGVLYIISAPSGAGKTTLCKEIIDIFPHLRHSVSYTTRQPRAGEVHGKDYYFISMDEFRSMVDKGEFAEWAEVHGNC YGTSIRTLEECRITGIDLILDIDIQGARQLKERYEGGVYIFILPPSYEELRRRLNGRSSDSDDVISRRIDAAAGEIRESR WYDYIIVNDQFSRAVEELKSVVVAERCRTFRVLETVTERFDMG >Mature_203_residues MKREGVLYIISAPSGAGKTTLCKEIIDIFPHLRHSVSYTTRQPRAGEVHGKDYYFISMDEFRSMVDKGEFAEWAEVHGNC YGTSIRTLEECRITGIDLILDIDIQGARQLKERYEGGVYIFILPPSYEELRRRLNGRSSDSDDVISRRIDAAAGEIRESR WYDYIIVNDQFSRAVEELKSVVVAERCRTFRVLETVTERFDMG
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=184, Percent_Identity=36.9565217391304, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI4504221, Length=184, Percent_Identity=36.9565217391304, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI226874831, Length=184, Percent_Identity=36.9565217391304, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI21361598, Length=187, Percent_Identity=29.9465240641711, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI14780902, Length=191, Percent_Identity=25.6544502617801, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI38570142, Length=177, Percent_Identity=28.8135593220339, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI111154074, Length=182, Percent_Identity=32.4175824175824, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4505237, Length=175, Percent_Identity=26.2857142857143, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118259, Length=175, Percent_Identity=26.2857142857143, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118263, Length=175, Percent_Identity=26.2857142857143, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118255, Length=175, Percent_Identity=26.2857142857143, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI52630447, Length=196, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI186700627, Length=181, Percent_Identity=23.2044198895028, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI186972120, Length=181, Percent_Identity=23.2044198895028, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI186700629, Length=181, Percent_Identity=23.2044198895028, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI21389483, Length=182, Percent_Identity=28.021978021978, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1790080, Length=190, Percent_Identity=49.4736842105263, Blast_Score=193, Evalue=9e-51, Organism=Caenorhabditis elegans, GI193203132, Length=175, Percent_Identity=38.2857142857143, Blast_Score=134, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508835, Length=175, Percent_Identity=38.2857142857143, Blast_Score=133, Evalue=7e-32, Organism=Caenorhabditis elegans, GI71988041, Length=183, Percent_Identity=23.4972677595628, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988048, Length=183, Percent_Identity=23.4972677595628, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=44.5054945054945, Blast_Score=167, Evalue=8e-43, Organism=Drosophila melanogaster, GI21356141, Length=187, Percent_Identity=37.9679144385027, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI161077626, Length=175, Percent_Identity=26.8571428571429, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640542, Length=175, Percent_Identity=26.8571428571429, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45554489, Length=175, Percent_Identity=26.8571428571429, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI85724806, Length=175, Percent_Identity=26.8571428571429, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI45554481, Length=175, Percent_Identity=26.8571428571429, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI116007136, Length=175, Percent_Identity=26.8571428571429, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI221330162, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI221330166, Length=197, Percent_Identity=28.4263959390863, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI221330164, Length=197, Percent_Identity=28.4263959390863, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_GEOMG (Q39T72)
Other databases:
- EMBL: CP000148 - RefSeq: YP_385277.1 - HSSP: P60546 - ProteinModelPortal: Q39T72 - SMR: Q39T72 - STRING: Q39T72 - GeneID: 3739488 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_2327 - NMPDR: fig|269799.3.peg.2571 - eggNOG: COG0194 - HOGENOM: HBG671982 - OMA: EWAEFAG - PhylomeDB: Q39T72 - ProtClustDB: PRK00300 - BioCyc: GMET269799:GMET_2327-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 23404; Mature: 23404
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREGVLYIISAPSGAGKTTLCKEIIDIFPHLRHSVSYTTRQPRAGEVHGKDYYFISMDE CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH FRSMVDKGEFAEWAEVHGNCYGTSIRTLEECRITGIDLILDIDIQGARQLKERYEGGVYI HHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEE FILPPSYEELRRRLNGRSSDSDDVISRRIDAAAGEIRESRWYDYIIVNDQFSRAVEELKS EEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH VVVAERCRTFRVLETVTERFDMG HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKREGVLYIISAPSGAGKTTLCKEIIDIFPHLRHSVSYTTRQPRAGEVHGKDYYFISMDE CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH FRSMVDKGEFAEWAEVHGNCYGTSIRTLEECRITGIDLILDIDIQGARQLKERYEGGVYI HHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEE FILPPSYEELRRRLNGRSSDSDDVISRRIDAAAGEIRESRWYDYIIVNDQFSRAVEELKS EEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH VVVAERCRTFRVLETVTERFDMG HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA