| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223334
Identifier: 78223334
GI number: 78223334
Start: 2395093
End: 2396016
Strand: Direct
Name: 78223334
Synonym: Gmet_2127
Alternate gene names: NA
Gene position: 2395093-2396016 (Clockwise)
Preceding gene: 78223333
Following gene: 78223335
Centisome position: 59.92
GC content: 58.01
Gene sequence:
>924_bases ATGAATCTATCAAAATCCCTGATACTGAGCATCTGCCTCACGACCATCGTCTTCATCCACTCGGGAGCCTGGGCCTTCAA TTCCAGTTCCTTCAACGGCACGGCCGACTTTTACGCCGGAGCCGCTCCGCCGCCGGGACTCCATCTCATCGACTACAACG TCTTCATGGATATCAAGAAGATAGAAAACAAGGGACAGGGACTGGTGGACGGCAAAGGGACCCTGACCGCCATAGCCTTC CGCCCCATCTATGTCTCGGAAAAGGGGCTCTTCGGCGGCAACTTCCTCATGCACTCCATCATTCCCCTCCTGTCGGTGGA GGCCGACGTGAAGGCAAACACGCCCGGCGGGCAGATCACCGTGCAAGGCCATGACGGAGGGCTTGGCGATGTCTATTTCG GGGTGGGGATGGCGTGGCACACCCCGGTCTGGCACTGGCTGACGGTACTGGACGTCATCACCCCCACCGGCAGCTTCGAT CCGAACAAACCCGTCAATGCCGGCAACAACGCCTTCATCATCGAACCGGTTGTGGCCGTTACCGGCATGTTCCCGAACGG CATGGAGGTGAATGCCAAGTTCATGTACTCCTACCACACCAAGAACAGCGACTATGTGGAAGCCGGAACGGGTATCAAGG GGTATCAGACGGGACAGGCGTTCCACATGGACTACAACGTGAACTATGCCGTGACCAAGGATCTGAAGCTCGGTGTTACC GGCTGGCTCTGGCAGGGACTGGAGAACGACCGGATCGGCGGGCAGAAACGTGCCGACACCAAGGACTTCGAATTCTCCAT GGGGCCGGCAGCCCGATACCAGAACGGCAAGTTTGCCGTCATCGGCAAGTATGTGCTGCCGGTGGCCGCCGAGAACCGTA TCGAAGCCAACCAGCTCTGGATCGATCTGGTCTATTCATTCTAG
Upstream 100 bases:
>100_bases CACCATCAAGAAGGCCCTGGACCCCAACAACATCCTGTCGCCGGGCAAATCAGGGATCACGGCAGGGTAACGTTCAATGA GCATTTGGAGGAAACAATCC
Downstream 100 bases:
>100_bases GGATTTCACAGGGATTGACACTCTTCCGGAGGGTACAACGATGGACGACAAGAAAATACTGATAATCAATCCAGGCTCCA CCTCGACGAAAATCGGTGTC
Product: phenol degradation-like protein
Products: NA
Alternate protein names: Signal Peptide; Meta-Pathway Phenol Degradation-Like Protein; Phenol Degradation-Like Protein; Phenol Metabolism Protein; Involved In Meta-Pathway Of Phenol Degradation Protein; Regulatory Protein Involved In In Phenol Degradation; Protein Involved In Meta-Pathway Of Phenol Degradation; Regulation Of Phenolics Degradation Protein; Meta-Pathway Phenol Degradation Protein; MetA-Pathway Phenol Degradation-Like Protein; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNLSKSLILSICLTTIVFIHSGAWAFNSSSFNGTADFYAGAAPPPGLHLIDYNVFMDIKKIENKGQGLVDGKGTLTAIAF RPIYVSEKGLFGGNFLMHSIIPLLSVEADVKANTPGGQITVQGHDGGLGDVYFGVGMAWHTPVWHWLTVLDVITPTGSFD PNKPVNAGNNAFIIEPVVAVTGMFPNGMEVNAKFMYSYHTKNSDYVEAGTGIKGYQTGQAFHMDYNVNYAVTKDLKLGVT GWLWQGLENDRIGGQKRADTKDFEFSMGPAARYQNGKFAVIGKYVLPVAAENRIEANQLWIDLVYSF
Sequences:
>Translated_307_residues MNLSKSLILSICLTTIVFIHSGAWAFNSSSFNGTADFYAGAAPPPGLHLIDYNVFMDIKKIENKGQGLVDGKGTLTAIAF RPIYVSEKGLFGGNFLMHSIIPLLSVEADVKANTPGGQITVQGHDGGLGDVYFGVGMAWHTPVWHWLTVLDVITPTGSFD PNKPVNAGNNAFIIEPVVAVTGMFPNGMEVNAKFMYSYHTKNSDYVEAGTGIKGYQTGQAFHMDYNVNYAVTKDLKLGVT GWLWQGLENDRIGGQKRADTKDFEFSMGPAARYQNGKFAVIGKYVLPVAAENRIEANQLWIDLVYSF >Mature_307_residues MNLSKSLILSICLTTIVFIHSGAWAFNSSSFNGTADFYAGAAPPPGLHLIDYNVFMDIKKIENKGQGLVDGKGTLTAIAF RPIYVSEKGLFGGNFLMHSIIPLLSVEADVKANTPGGQITVQGHDGGLGDVYFGVGMAWHTPVWHWLTVLDVITPTGSFD PNKPVNAGNNAFIIEPVVAVTGMFPNGMEVNAKFMYSYHTKNSDYVEAGTGIKGYQTGQAFHMDYNVNYAVTKDLKLGVT GWLWQGLENDRIGGQKRADTKDFEFSMGPAARYQNGKFAVIGKYVLPVAAENRIEANQLWIDLVYSF
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33492; Mature: 33492
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSKSLILSICLTTIVFIHSGAWAFNSSSFNGTADFYAGAAPPPGLHLIDYNVFMDIKK CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHCCCCCCCCCCEEEEEEEEEEEEEH IENKGQGLVDGKGTLTAIAFRPIYVSEKGLFGGNFLMHSIIPLLSVEADVKANTPGGQIT HHCCCCEEECCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHEECCCCEECCCCCEEE VQGHDGGLGDVYFGVGMAWHTPVWHWLTVLDVITPTGSFDPNKPVNAGNNAFIIEPVVAV EEECCCCCCCHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHH TGMFPNGMEVNAKFMYSYHTKNSDYVEAGTGIKGYQTGQAFHMDYNVNYAVTKDLKLGVT CCCCCCCEEEEEEEEEEEECCCCCEEECCCCCCCEECCCEEEEEECCEEEEECCEEECCC GWLWQGLENDRIGGQKRADTKDFEFSMGPAARYQNGKFAVIGKYVLPVAAENRIEANQLW HHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCEEEEEEEEEEECCCCCCCHHEEE IDLVYSF EEEEECC >Mature Secondary Structure MNLSKSLILSICLTTIVFIHSGAWAFNSSSFNGTADFYAGAAPPPGLHLIDYNVFMDIKK CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHCCCCCCCCCCEEEEEEEEEEEEEH IENKGQGLVDGKGTLTAIAFRPIYVSEKGLFGGNFLMHSIIPLLSVEADVKANTPGGQIT HHCCCCEEECCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHEECCCCEECCCCCEEE VQGHDGGLGDVYFGVGMAWHTPVWHWLTVLDVITPTGSFDPNKPVNAGNNAFIIEPVVAV EEECCCCCCCHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHH TGMFPNGMEVNAKFMYSYHTKNSDYVEAGTGIKGYQTGQAFHMDYNVNYAVTKDLKLGVT CCCCCCCEEEEEEEEEEEECCCCCEEECCCCCCCEECCCEEEEEECCEEEEECCEEECCC GWLWQGLENDRIGGQKRADTKDFEFSMGPAARYQNGKFAVIGKYVLPVAAENRIEANQLW HHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCEEEEEEEEEEECCCCCCCHHEEE IDLVYSF EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA